RNA–Protein interactions for RNA: ENST00000324340.13

DDX39A-202, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,355 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-202ENST00000324340 PGGT1BP53609 377 aa12.58□□□□□ -0.4
DDX39A-202ENST00000324340 ADPRHP54922 357 aa12.58□□□□□ -0.4
DDX39A-202ENST00000324340 B4GALNT1Q00973 533 aa12.58□□□□□ -0.4
DDX39A-202ENST00000324340 ZNF460Q14592 562 aa12.58□□□□□ -0.4
DDX39A-202ENST00000324340 LRRC14Q15048 493 aa12.58□□□□□ -0.4
DDX39A-202ENST00000324340 RCN1Q15293 331 aa12.58□□□□□ -0.4
DDX39A-202ENST00000324340 CCDC153Q494R4 210 aa12.58□□□□□ -0.4
DDX39A-202ENST00000324340 GPRC6AQ5T6X5 926 aa12.58□□□□□ -0.4
DDX39A-202ENST00000324340 N4BP2L1Q5TBK1 243 aaPredicted RBP12.58□□□□□ -0.4
DDX39A-202ENST00000324340 KIAA1161Q6NSJ0 714 aa12.58□□□□□ -0.4
DDX39A-202ENST00000324340 AAGABQ6PD74 315 aa12.58□□□□□ -0.4
DDX39A-202ENST00000324340 TMEM207Q6UWW9 146 aa12.58□□□□□ -0.4
DDX39A-202ENST00000324340 ACAD11Q709F0 780 aa12.58□□□□□ -0.4
DDX39A-202ENST00000324340 MGARPQ8TDB4 240 aa12.58□□□□□ -0.4
DDX39A-202ENST00000324340 HEXDCQ8WVB3 486 aa12.58□□□□□ -0.4
DDX39A-202ENST00000324340 GLYATL1Q969I3 302 aa12.58□□□□□ -0.4
DDX39A-202ENST00000324340 CCDC97Q96F63 343 aaPredicted RBP12.58□□□□□ -0.4
DDX39A-202ENST00000324340 GPR78Q96P69 363 aa12.58□□□□□ -0.4
DDX39A-202ENST00000324340 FAM111AQ96PZ2 611 aa12.58□□□□□ -0.4
DDX39A-202ENST00000324340 OSBPL6Q9BZF3 934 aa12.58□□□□□ -0.4
DDX39A-202ENST00000324340 C12orf65Q9H3J6 166 aaKnown RBP12.58□□□□□ -0.4
DDX39A-202ENST00000324340 PREBQ9HCU5 417 aa12.58□□□□□ -0.4
DDX39A-202ENST00000324340 POLMQ9NP87 494 aaPredicted RBP12.58□□□□□ -0.4
DDX39A-202ENST00000324340 TIMMDC1Q9NPL8 285 aa12.58□□□□□ -0.4
DDX39A-202ENST00000324340 TMEM216Q9P0N5 145 aa12.58□□□□□ -0.4
DDX39A-202ENST00000324340 ZFP69BQ9UJL9 534 aa12.58□□□□□ -0.4
DDX39A-202ENST00000324340 FBXL21Q9UKT6 434 aa12.58□□□□□ -0.4
DDX39A-202ENST00000324340 COQ6Q9Y2Z9 468 aa12.58□□□□□ -0.4
DDX39A-202ENST00000324340 TCRBV21S2A2A0A5A6 115 aa12.57□□□□□ -0.4
DDX39A-202ENST00000324340 IGLON5A6NGN9 336 aa12.57□□□□□ -0.4
DDX39A-202ENST00000324340 GOLGA8CPA6NN73 597 aa12.57□□□□□ -0.4
DDX39A-202ENST00000324340 C10orf142B7Z368 130 aa12.57□□□□□ -0.4
DDX39A-202ENST00000324340 DLL1O00548 723 aa12.57□□□□□ -0.4
DDX39A-202ENST00000324340 GSC2O15499 205 aa12.57□□□□□ -0.4
DDX39A-202ENST00000324340 PLIN3O60664 434 aa12.57□□□□□ -0.4
DDX39A-202ENST00000324340 FKBP6O75344 327 aa12.57□□□□□ -0.4
DDX39A-202ENST00000324340 RHOBTB1O94844 696 aa12.57□□□□□ -0.4
DDX39A-202ENST00000324340 PROCP04070 461 aa12.57□□□□□ -0.4
DDX39A-202ENST00000324340 LTA4HP09960 611 aaKnown RBP12.57□□□□□ -0.4
DDX39A-202ENST00000324340 ZNF37AP17032 561 aaPredicted RBP12.57□□□□□ -0.4
DDX39A-202ENST00000324340 TEAD1P28347 426 aa12.57□□□□□ -0.4
DDX39A-202ENST00000324340 GMPRP36959 345 aa12.57□□□□□ -0.4
DDX39A-202ENST00000324340 PSMD7P51665 324 aa12.57□□□□□ -0.4
DDX39A-202ENST00000324340 CLCN7P51798 805 aa12.57□□□□□ -0.4
DDX39A-202ENST00000324340 RPS21P63220 83 aaKnown RBP12.57□□□□□ -0.4
DDX39A-202ENST00000324340 PPARDQ03181 441 aa12.57□□□□□ -0.4
DDX39A-202ENST00000324340 DLG1Q12959 904 aa12.57□□□□□ -0.4
DDX39A-202ENST00000324340 GAS6Q14393 721 aa12.57□□□□□ -0.4
DDX39A-202ENST00000324340 SEPT7Q16181 437 aaKnown RBP12.57□□□□□ -0.4
DDX39A-202ENST00000324340 TRMT5Q32P41 509 aaKnown RBP12.57□□□□□ -0.4
DDX39A-202ENST00000324340 MAP7D1Q3KQU3 841 aa12.57□□□□□ -0.4
DDX39A-202ENST00000324340 KHDC1Q4VXA5 237 aaKnown RBP12.57□□□□□ -0.4
DDX39A-202ENST00000324340 LDLRAP1Q5SW96 308 aa12.57□□□□□ -0.4
DDX39A-202ENST00000324340 C6orf163Q5TEZ5 329 aa12.57□□□□□ -0.4
DDX39A-202ENST00000324340 NET1Q7Z628 596 aaPredicted RBP12.57□□□□□ -0.4
DDX39A-202ENST00000324340 PIM3Q86V86 326 aa12.57□□□□□ -0.4
DDX39A-202ENST00000324340 SIX5Q8N196 739 aa12.57□□□□□ -0.4
DDX39A-202ENST00000324340 TMEM151AQ8N4L1 468 aa12.57□□□□□ -0.4
DDX39A-202ENST00000324340 KCTD4Q8WVF5 259 aa12.57□□□□□ -0.4
DDX39A-202ENST00000324340 ASB12Q8WXK4 309 aa12.57□□□□□ -0.4
DDX39A-202ENST00000324340 PTCD3Q96EY7 689 aaKnown RBP12.57□□□□□ -0.4
DDX39A-202ENST00000324340 NSL1Q96IY1 281 aa12.57□□□□□ -0.4
DDX39A-202ENST00000324340 C1QTNF2Q9BXJ5 285 aa12.57□□□□□ -0.4
DDX39A-202ENST00000324340 SYTL2Q9HCH5 934 aa12.57□□□□□ -0.4
DDX39A-202ENST00000324340 MLXIPLQ9NP71 852 aa12.57□□□□□ -0.4
DDX39A-202ENST00000324340 ITM2CQ9NQX7 267 aa12.57□□□□□ -0.4
DDX39A-202ENST00000324340 LATS2Q9NRM7 1088 aa12.57□□□□□ -0.4
DDX39A-202ENST00000324340 IGSF5Q9NSI5 407 aa12.57□□□□□ -0.4
DDX39A-202ENST00000324340 USP36Q9P275 1121 aaKnown RBP12.57□□□□□ -0.4
DDX39A-202ENST00000324340 KLHL42Q9P2K6 505 aa12.57□□□□□ -0.4
DDX39A-202ENST00000324340 CNOT6Q9ULM6 557 aaKnown RBP12.57□□□□□ -0.4
DDX39A-202ENST00000324340 ZFR2Q9UPR6 939 aaKnown RBP12.57□□□□□ -0.4
DDX39A-202ENST00000324340 NCKAP1Q9Y2A7 1128 aa12.57□□□□□ -0.4
DDX39A-202ENST00000324340 PRSS21Q9Y6M0 314 aa12.57□□□□□ -0.4
DDX39A-202ENST00000324340 FAM170BA6NMN3 283 aa12.56□□□□□ -0.4
DDX39A-202ENST00000324340 TARM1B6A8C7 271 aa12.56□□□□□ -0.4
DDX39A-202ENST00000324340 CFAP99D6REC4 459 aa12.56□□□□□ -0.4
DDX39A-202ENST00000324340 NIPSNAP2O75323 286 aa12.56□□□□□ -0.4
DDX39A-202ENST00000324340 ENTPD5O75356 428 aa12.56□□□□□ -0.4
DDX39A-202ENST00000324340 AP2A2O94973 939 aa12.56□□□□□ -0.4
DDX39A-202ENST00000324340 PCDH8O95206 1070 aa12.56□□□□□ -0.4
DDX39A-202ENST00000324340 APOA4P06727 396 aa12.56□□□□□ -0.4
DDX39A-202ENST00000324340 ACADMP11310 421 aa12.56□□□□□ -0.4
DDX39A-202ENST00000324340 ATP1B2P14415 290 aaPredicted RBP12.56□□□□□ -0.4
DDX39A-202ENST00000324340 TPMTP51580 245 aa12.56□□□□□ -0.4
DDX39A-202ENST00000324340 KPNA2P52292 529 aaKnown RBP12.56□□□□□ -0.4
DDX39A-202ENST00000324340 IRX4P78413 519 aa12.56□□□□□ -0.4
DDX39A-202ENST00000324340 PDAP1Q13442 181 aaKnown RBP12.56□□□□□ -0.4
DDX39A-202ENST00000324340 UBXN2BQ14CS0 331 aa12.56□□□□□ -0.4
DDX39A-202ENST00000324340 SEL1L3Q68CR1 1132 aa12.56□□□□□ -0.4
DDX39A-202ENST00000324340 PTRHD1Q6GMV3 140 aaKnown RBP12.56□□□□□ -0.4
DDX39A-202ENST00000324340 UGT3A1Q6NUS8 523 aa12.56□□□□□ -0.4
DDX39A-202ENST00000324340 CLNKQ7Z7G1 428 aa12.56□□□□□ -0.4
DDX39A-202ENST00000324340 PELI3Q8N2H9 469 aa12.56□□□□□ -0.4
DDX39A-202ENST00000324340 CLDN19Q8N6F1 224 aa12.56□□□□□ -0.4
DDX39A-202ENST00000324340 OR14C36Q8NHC7 312 aa12.56□□□□□ -0.4
DDX39A-202ENST00000324340 CD200R1Q8TD46 325 aa12.56□□□□□ -0.4
DDX39A-202ENST00000324340 GANCQ8TET4 914 aa12.56□□□□□ -0.4
DDX39A-202ENST00000324340 NAT14Q8WUY8 206 aa12.56□□□□□ -0.4
DDX39A-202ENST00000324340 ANKRD49Q8WVL7 239 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms