RNA–Protein interactions for RNA: ENST00000322507.12

COL12A1-201, Transcript of collagen type XII alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL12A1, Length 11,723 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-201ENST00000322507 FBP2O00757 339 aa9.63□□□□□ -0.87
COL12A1-201ENST00000322507 C2CD2LO14523 706 aa9.63□□□□□ -0.87
COL12A1-201ENST00000322507 CASKO14936 926 aa9.63□□□□□ -0.87
COL12A1-201ENST00000322507 SNAPINO95295 136 aa9.63□□□□□ -0.87
COL12A1-201ENST00000322507 AGTR1P30556 359 aa9.63□□□□□ -0.87
COL12A1-201ENST00000322507 RORCP51449 518 aa9.63□□□□□ -0.87
COL12A1-201ENST00000322507 C4orf17Q53FE4 359 aa9.63□□□□□ -0.87
COL12A1-201ENST00000322507 FAM111BQ6SJ93 734 aa9.63□□□□□ -0.87
COL12A1-201ENST00000322507 UBE2J2Q8N2K1 259 aa9.63□□□□□ -0.87
COL12A1-201ENST00000322507 PTGFRNQ9P2B2 879 aa9.63□□□□□ -0.87
COL12A1-201ENST00000322507 SLC27A6Q9Y2P4 619 aa9.63□□□□□ -0.87
COL12A1-201ENST00000322507 SNCAIPQ9Y6H5 919 aa9.63□□□□□ -0.87
COL12A1-201ENST00000322507 E9PI62 339 aa9.63□□□□□ -0.87
COL12A1-201ENST00000322507 ETS2P15036 469 aa9.63□□□□□ -0.87
COL12A1-201ENST00000322507 KDELR1P24390 212 aa9.63□□□□□ -0.87
COL12A1-201ENST00000322507 RPL21P46778 160 aaKnown RBP9.63□□□□□ -0.87
COL12A1-201ENST00000322507 SMAD1Q15797 465 aaKnown RBP9.63□□□□□ -0.87
COL12A1-201ENST00000322507 STRADAQ7RTN6 431 aa9.63□□□□□ -0.87
COL12A1-201ENST00000322507 RBFAQ8N0V3 343 aa9.63□□□□□ -0.87
COL12A1-201ENST00000322507 PHF21BQ96EK2 531 aa9.63□□□□□ -0.87
COL12A1-201ENST00000322507 CDRT15Q96T59 188 aa9.63□□□□□ -0.87
COL12A1-201ENST00000322507 RBM4BQ9BQ04 359 aaKnown RBP9.63□□□□□ -0.87
COL12A1-201ENST00000322507 RBM4Q9BWF3 364 aaKnown RBP9.63□□□□□ -0.87
COL12A1-201ENST00000322507 IFT46Q9NQC8 304 aa9.63□□□□□ -0.87
COL12A1-201ENST00000322507 KNL1Q8NG31 2342 aa9.63□□□□□ -0.87
COL12A1-201ENST00000322507 TUBG1P23258 451 aa9.63□□□□□ -0.87
COL12A1-201ENST00000322507 ACOX1Q15067 660 aa9.63□□□□□ -0.87
COL12A1-201ENST00000322507 GPRIN3Q6ZVF9 776 aa9.63□□□□□ -0.87
COL12A1-201ENST00000322507 SELENOMQ8WWX9 145 aa9.63□□□□□ -0.87
COL12A1-201ENST00000322507 ZDHHC4Q9NPG8 344 aa9.63□□□□□ -0.87
COL12A1-201ENST00000322507 BRD7Q9NPI1 651 aa9.63□□□□□ -0.87
COL12A1-201ENST00000322507 SDHAF2Q9NX18 166 aa9.63□□□□□ -0.87
COL12A1-201ENST00000322507 SPATA31A5Q5VU36 1347 aa9.63□□□□□ -0.87
COL12A1-201ENST00000322507 SPATA31A7Q8IWB4 1347 aa9.63□□□□□ -0.87
COL12A1-201ENST00000322507 ATRNO75882 1429 aa9.63□□□□□ -0.87
COL12A1-201ENST00000322507 TRAV19A0A0A6YYK7 116 aa9.63□□□□□ -0.87
COL12A1-201ENST00000322507 TRAPPC13A5PLN9 417 aa9.63□□□□□ -0.87
COL12A1-201ENST00000322507 PCDH8O95206 1070 aa9.63□□□□□ -0.87
COL12A1-201ENST00000322507 RAB3BP20337 219 aa9.63□□□□□ -0.87
COL12A1-201ENST00000322507 DCDC1P59894 354 aa9.63□□□□□ -0.87
COL12A1-201ENST00000322507 GALK2Q01415 458 aa9.63□□□□□ -0.87
COL12A1-201ENST00000322507 ZNF529Q6P280 563 aa9.63□□□□□ -0.87
COL12A1-201ENST00000322507 FBRSL1Q9HCM7 1045 aaKnown RBP9.63□□□□□ -0.87
COL12A1-201ENST00000322507 IFT80Q9P2H3 777 aaPredicted RBP9.63□□□□□ -0.87
COL12A1-201ENST00000322507 A0A087X0B3 334 aa9.63□□□□□ -0.87
COL12A1-201ENST00000322507 ACSL4O60488 711 aa9.63□□□□□ -0.87
COL12A1-201ENST00000322507 SCAF4O95104 1147 aaKnown RBP9.63□□□□□ -0.87
COL12A1-201ENST00000322507 RPLP0P05388 317 aaKnown RBP9.63□□□□□ -0.87
COL12A1-201ENST00000322507 PTGR1Q14914 329 aa9.63□□□□□ -0.87
COL12A1-201ENST00000322507 RBM48Q5RL73 367 aaKnown RBP9.63□□□□□ -0.87
COL12A1-201ENST00000322507 LRRN1Q6UXK5 716 aa9.63□□□□□ -0.87
COL12A1-201ENST00000322507 PHF13Q86YI8 300 aaPredicted RBP9.63□□□□□ -0.87
COL12A1-201ENST00000322507 JPH3Q8WXH2 748 aaPredicted RBP9.63□□□□□ -0.87
COL12A1-201ENST00000322507 CRISPLD1Q9H336 500 aa9.63□□□□□ -0.87
COL12A1-201ENST00000322507 SUCOQ9UBS9 1254 aaKnown RBP9.63□□□□□ -0.87
COL12A1-201ENST00000322507 ARID1BQ8NFD5 2236 aaPredicted RBP9.63□□□□□ -0.87
COL12A1-201ENST00000322507 C1QTNF3-AMACRE9PGA6 284 aa9.62□□□□□ -0.87
COL12A1-201ENST00000322507 SLC30A4O14863 429 aa9.62□□□□□ -0.87
COL12A1-201ENST00000322507 PROCP04070 461 aa9.62□□□□□ -0.87
COL12A1-201ENST00000322507 SLC6A2P23975 617 aa9.62□□□□□ -0.87
COL12A1-201ENST00000322507 PRDX6P30041 224 aa9.62□□□□□ -0.87
COL12A1-201ENST00000322507 SEPHS1P49903 392 aa9.62□□□□□ -0.87
COL12A1-201ENST00000322507 FSCN1Q16658 493 aaKnown RBP9.62□□□□□ -0.87
COL12A1-201ENST00000322507 METTL21CQ5VZV1 264 aa9.62□□□□□ -0.87
COL12A1-201ENST00000322507 FBXL19Q6PCT2 694 aa9.62□□□□□ -0.87
COL12A1-201ENST00000322507 FAM20CQ8IXL6 584 aa9.62□□□□□ -0.87
COL12A1-201ENST00000322507 TCF12Q99081 682 aa9.62□□□□□ -0.87
COL12A1-201ENST00000322507 HIPK3Q9H422 1215 aa9.62□□□□□ -0.87
COL12A1-201ENST00000322507 CNOT11Q9UKZ1 510 aaKnown RBP9.62□□□□□ -0.87
COL12A1-201ENST00000322507 PTCH2Q9Y6C5 1203 aa9.62□□□□□ -0.87
COL12A1-201ENST00000322507 TNNI3P19429 210 aa9.62□□□□□ -0.87
COL12A1-201ENST00000322507 HNF1AP20823 631 aa9.62□□□□□ -0.87
COL12A1-201ENST00000322507 ELP6Q0PNE2 266 aa9.62□□□□□ -0.87
COL12A1-201ENST00000322507 OTOP1Q7RTM1 612 aa9.62□□□□□ -0.87
COL12A1-201ENST00000322507 TWNKQ96RR1 684 aa9.62□□□□□ -0.87
COL12A1-201ENST00000322507 APBA2Q99767 749 aa9.62□□□□□ -0.87
COL12A1-201ENST00000322507 CIPCQ9C0C6 399 aa9.62□□□□□ -0.87
COL12A1-201ENST00000322507 MARCH2Q9P0N8 246 aa9.62□□□□□ -0.87
COL12A1-201ENST00000322507 ZMYM5Q9UJ78 669 aa9.62□□□□□ -0.87
COL12A1-201ENST00000322507 ZNF132P52740 706 aa9.62□□□□□ -0.87
COL12A1-201ENST00000322507 COL13A1Q5TAT6 717 aaPredicted RBP9.62□□□□□ -0.87
COL12A1-201ENST00000322507 TICAM1Q8IUC6 712 aa9.62□□□□□ -0.87
COL12A1-201ENST00000322507 OFCC1Q8IZS5 231 aa9.62□□□□□ -0.87
COL12A1-201ENST00000322507 DSELQ8IZU8 1212 aa9.62□□□□□ -0.87
COL12A1-201ENST00000322507 HJURPQ8NCD3 748 aaPredicted RBP9.62□□□□□ -0.87
COL12A1-201ENST00000322507 POLD4Q9HCU8 107 aa9.62□□□□□ -0.87
COL12A1-201ENST00000322507 GULP1Q9UBP9 304 aa9.62□□□□□ -0.87
COL12A1-201ENST00000322507 TPP1O14773 563 aa9.62□□□□□ -0.87
COL12A1-201ENST00000322507 TULP3O75386 442 aa9.62□□□□□ -0.87
COL12A1-201ENST00000322507 MAT2AP31153 395 aaKnown RBP9.62□□□□□ -0.87
COL12A1-201ENST00000322507 ZNF181Q2M3W8 571 aa9.62□□□□□ -0.87
COL12A1-201ENST00000322507 SPATA19Q7Z5L4 167 aa9.62□□□□□ -0.87
COL12A1-201ENST00000322507 P2RY8Q86VZ1 359 aa9.62□□□□□ -0.87
COL12A1-201ENST00000322507 SECISBP2Q96T21 854 aaKnown RBP9.62□□□□□ -0.87
COL12A1-201ENST00000322507 ETNK2Q9NVF9 386 aa9.62□□□□□ -0.87
COL12A1-201ENST00000322507 DPEP1P16444 411 aa9.62□□□□□ -0.87
COL12A1-201ENST00000322507 TOB1P50616 345 aaPredicted RBP9.62□□□□□ -0.87
COL12A1-201ENST00000322507 HYIQ5T013 277 aa9.62□□□□□ -0.87
COL12A1-201ENST00000322507 ANKRD13BQ86YJ7 626 aa9.62□□□□□ -0.87
COL12A1-201ENST00000322507 LRRC52Q8N7C0 313 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms