RNA–Protein interactions for RNA: ENST00000320876.10

SMCHD1-201, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMCHD1, Length 8,821 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-201ENST00000320876 RNASEH2BQ5TBB1 312 aaKnown RBP16.69■□□□□ 0.26
SMCHD1-201ENST00000320876 GTPBP3Q969Y2 492 aaKnown RBP16.69■□□□□ 0.26
SMCHD1-201ENST00000320876 ART5Q96L15 291 aa16.69■□□□□ 0.26
SMCHD1-201ENST00000320876 PDCD2LQ9BRP1 358 aa16.69■□□□□ 0.26
SMCHD1-201ENST00000320876 DUSP16Q9BY84 665 aa16.69■□□□□ 0.26
SMCHD1-201ENST00000320876 ELAC1Q9H777 363 aaKnown RBP16.69■□□□□ 0.26
SMCHD1-201ENST00000320876 MED31Q9Y3C7 131 aa16.69■□□□□ 0.26
SMCHD1-201ENST00000320876 FER1L4A9Z1Z3 1794 aa16.69■□□□□ 0.26
SMCHD1-201ENST00000320876 VWA5B1Q5TIE3 1220 aa16.69■□□□□ 0.26
SMCHD1-201ENST00000320876 CMTR2Q8IYT2 770 aaKnown RBP16.69■□□□□ 0.26
SMCHD1-201ENST00000320876 SLC43A3Q8NBI5 491 aa16.69■□□□□ 0.26
SMCHD1-201ENST00000320876 SETD6Q8TBK2 473 aa16.69■□□□□ 0.26
SMCHD1-201ENST00000320876 SNTG1Q9NSN8 517 aa16.69■□□□□ 0.26
SMCHD1-201ENST00000320876 CALML5Q9NZT1 146 aa16.69■□□□□ 0.26
SMCHD1-201ENST00000320876 TMEM5Q9Y2B1 443 aa16.69■□□□□ 0.26
SMCHD1-201ENST00000320876 BTG3Q14201 252 aaPredicted RBP16.68■□□□□ 0.26
SMCHD1-201ENST00000320876 LRRC55Q6ZSA7 311 aa16.68■□□□□ 0.26
SMCHD1-201ENST00000320876 MYO19Q96H55 970 aa16.68■□□□□ 0.26
SMCHD1-201ENST00000320876 ZBTB45Q96K62 511 aaPredicted RBP16.68■□□□□ 0.26
SMCHD1-201ENST00000320876 TMEM150BA6NC51 233 aa16.68■□□□□ 0.26
SMCHD1-201ENST00000320876 ZNF132P52740 706 aa16.68■□□□□ 0.26
SMCHD1-201ENST00000320876 PTF1AQ7RTS3 328 aa16.68■□□□□ 0.26
SMCHD1-201ENST00000320876 ANKHQ9HCJ1 492 aa16.68■□□□□ 0.26
SMCHD1-201ENST00000320876 RPL36Q9Y3U8 105 aaKnown RBP16.68■□□□□ 0.26
SMCHD1-201ENST00000320876 PTPRMP28827 1452 aa16.68■□□□□ 0.26
SMCHD1-201ENST00000320876 TCRBV5S4A2TA0A5A2 114 aa16.68■□□□□ 0.26
SMCHD1-201ENST00000320876 BUD23O43709 281 aaKnown RBP16.68■□□□□ 0.26
SMCHD1-201ENST00000320876 GALNT7Q86SF2 657 aa16.68■□□□□ 0.26
SMCHD1-201ENST00000320876 FBXO9Q9UK97 447 aaPredicted RBP16.68■□□□□ 0.26
SMCHD1-201ENST00000320876 POM121L1PQ3SYA9 428 aa16.68■□□□□ 0.26
SMCHD1-201ENST00000320876 PLEKHG4Q58EX7 1191 aa16.68■□□□□ 0.26
SMCHD1-201ENST00000320876 RAVER1Q8IY67 606 aaKnown RBP16.68■□□□□ 0.26
SMCHD1-201ENST00000320876 UNC5BQ8IZJ1 945 aa16.68■□□□□ 0.26
SMCHD1-201ENST00000320876 MFSD14AQ96MC6 490 aa16.68■□□□□ 0.26
SMCHD1-201ENST00000320876 KERAO60938 352 aa16.68■□□□□ 0.26
SMCHD1-201ENST00000320876 XKR4Q5GH76 650 aa16.68■□□□□ 0.26
SMCHD1-201ENST00000320876 ZNF782Q6ZMW2 699 aaPredicted RBP16.68■□□□□ 0.26
SMCHD1-201ENST00000320876 C12orf43Q96C57 262 aaKnown RBP16.68■□□□□ 0.26
SMCHD1-201ENST00000320876 ZFP3Q96NJ6 502 aa16.68■□□□□ 0.26
SMCHD1-201ENST00000320876 PRKAB1Q9Y478 270 aa16.68■□□□□ 0.26
SMCHD1-201ENST00000320876 CPNE3O75131 537 aaKnown RBP16.68■□□□□ 0.26
SMCHD1-201ENST00000320876 MATN4O95460 622 aa16.68■□□□□ 0.26
SMCHD1-201ENST00000320876 MAFIPQ8WZ33 124 aa16.68■□□□□ 0.26
SMCHD1-201ENST00000320876 C8orf48Q96LL4 319 aa16.68■□□□□ 0.26
SMCHD1-201ENST00000320876 ZSWIM3Q96MP5 696 aa16.68■□□□□ 0.26
SMCHD1-201ENST00000320876 MTMR10Q9NXD2 777 aa16.68■□□□□ 0.26
SMCHD1-201ENST00000320876 COLEC10Q9Y6Z7 277 aa16.68■□□□□ 0.26
SMCHD1-201ENST00000320876 DCLK1O15075 740 aa16.68■□□□□ 0.26
SMCHD1-201ENST00000320876 CDH12P55289 794 aa16.68■□□□□ 0.26
SMCHD1-201ENST00000320876 MRPS5P82675 430 aaKnown RBP16.68■□□□□ 0.26
SMCHD1-201ENST00000320876 CACNG1Q06432 222 aa16.68■□□□□ 0.26
SMCHD1-201ENST00000320876 SERPINA13PQ6UXR4 307 aa16.68■□□□□ 0.26
SMCHD1-201ENST00000320876 IQCKQ8N0W5 287 aa16.68■□□□□ 0.26
SMCHD1-201ENST00000320876 PNLDC1Q8NA58 520 aaKnown RBP16.68■□□□□ 0.26
SMCHD1-201ENST00000320876 DNAJB8Q8NHS0 232 aa16.68■□□□□ 0.26
SMCHD1-201ENST00000320876 DQX1Q8TE96 717 aaKnown RBP16.68■□□□□ 0.26
SMCHD1-201ENST00000320876 SHC3Q92529 594 aa16.68■□□□□ 0.26
SMCHD1-201ENST00000320876 SGCDQ92629 289 aa16.68■□□□□ 0.26
SMCHD1-201ENST00000320876 GJD4Q96KN9 370 aaPredicted RBP16.68■□□□□ 0.26
SMCHD1-201ENST00000320876 METTL8Q9H825 291 aaKnown RBP16.68■□□□□ 0.26
SMCHD1-201ENST00000320876 PCDHGB1Q9Y5G3 927 aa16.68■□□□□ 0.26
SMCHD1-201ENST00000320876 LMTK2Q8IWU2 1503 aa16.68■□□□□ 0.26
SMCHD1-201ENST00000320876 ADGRG6Q86SQ4 1221 aa16.67■□□□□ 0.26
SMCHD1-201ENST00000320876 CRYBG2Q8N1P7 616 aa16.67■□□□□ 0.26
SMCHD1-201ENST00000320876 LSM14AQ8ND56 463 aaKnown RBP16.67■□□□□ 0.26
SMCHD1-201ENST00000320876 CNDP2Q96KP4 475 aaKnown RBP16.67■□□□□ 0.26
SMCHD1-201ENST00000320876 LHX5Q9H2C1 402 aa16.67■□□□□ 0.26
SMCHD1-201ENST00000320876 CEMIPQ8WUJ3 1361 aa16.67■□□□□ 0.26
SMCHD1-201ENST00000320876 APOLD1Q96LR9 279 aa16.67■□□□□ 0.26
SMCHD1-201ENST00000320876 TSSK3Q96PN8 268 aa16.67■□□□□ 0.26
SMCHD1-201ENST00000320876 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.67■□□□□ 0.26
SMCHD1-201ENST00000320876 WDR55Q9H6Y2 383 aaPredicted RBP16.67■□□□□ 0.26
SMCHD1-201ENST00000320876 CPSF4LA6NMK7 179 aaKnown RBP16.67■□□□□ 0.26
SMCHD1-201ENST00000320876 ISM1B1AKI9 464 aa16.67■□□□□ 0.26
SMCHD1-201ENST00000320876 FSCN2O14926 492 aa16.67■□□□□ 0.26
SMCHD1-201ENST00000320876 PER2O15055 1255 aa16.67■□□□□ 0.26
SMCHD1-201ENST00000320876 ASGR1P07306 291 aa16.67■□□□□ 0.26
SMCHD1-201ENST00000320876 FAM189A2Q15884 450 aa16.67■□□□□ 0.26
SMCHD1-201ENST00000320876 TM6SF2Q9BZW4 377 aa16.67■□□□□ 0.26
SMCHD1-201ENST00000320876 IRF2BPLQ9H1B7 796 aa16.67■□□□□ 0.26
SMCHD1-201ENST00000320876 MRPL17Q9NRX2 175 aaKnown RBP16.67■□□□□ 0.26
SMCHD1-201ENST00000320876 CEP170BQ9Y4F5 1589 aaPredicted RBP16.67■□□□□ 0.26
SMCHD1-201ENST00000320876 A0A0U1RQJ8 604 aa16.67■□□□□ 0.26
SMCHD1-201ENST00000320876 ADRB2P07550 413 aa16.67■□□□□ 0.26
SMCHD1-201ENST00000320876 PIRTP0C851 137 aa16.67■□□□□ 0.26
SMCHD1-201ENST00000320876 HTR7P34969 479 aa16.67■□□□□ 0.26
SMCHD1-201ENST00000320876 RPL26P61254 145 aaKnown RBP16.67■□□□□ 0.26
SMCHD1-201ENST00000320876 ZNF155Q12901 538 aaPredicted RBP16.67■□□□□ 0.26
SMCHD1-201ENST00000320876 PTPN20Q4JDL3 420 aa16.67■□□□□ 0.26
SMCHD1-201ENST00000320876 ABHD16BQ9H3Z7 469 aa16.67■□□□□ 0.26
SMCHD1-201ENST00000320876 TRPV4Q9HBA0 871 aa16.67■□□□□ 0.26
SMCHD1-201ENST00000320876 KAT7O95251 611 aa16.67■□□□□ 0.26
SMCHD1-201ENST00000320876 ACVR2AP27037 513 aa16.67■□□□□ 0.26
SMCHD1-201ENST00000320876 MAB21L1Q13394 359 aa16.67■□□□□ 0.26
SMCHD1-201ENST00000320876 DCLRE1AQ6PJP8 1040 aa16.67■□□□□ 0.26
SMCHD1-201ENST00000320876 LPGAT1Q92604 370 aa16.67■□□□□ 0.26
SMCHD1-201ENST00000320876 MTMR9Q96QG7 549 aa16.67■□□□□ 0.26
SMCHD1-201ENST00000320876 FBXL21Q9UKT6 434 aa16.67■□□□□ 0.26
SMCHD1-201ENST00000320876 PCDHB9Q9Y5E1 797 aa16.67■□□□□ 0.26
SMCHD1-201ENST00000320876 OR6C70A6NIJ9 312 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms