RNA–Protein interactions for RNA: ENST00000318266.9

PTPRA-202, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRA, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-202ENST00000318266 CLK1P49759 484 aaKnown RBP9.54□□□□□ -0.88
PTPRA-202ENST00000318266 LILRA4P59901 499 aa9.54□□□□□ -0.88
PTPRA-202ENST00000318266 DSC2Q02487 901 aa9.54□□□□□ -0.88
PTPRA-202ENST00000318266 EMX2Q04743 252 aa9.54□□□□□ -0.88
PTPRA-202ENST00000318266 VAC14Q08AM6 782 aa9.54□□□□□ -0.88
PTPRA-202ENST00000318266 SCAPQ12770 1279 aa9.54□□□□□ -0.88
PTPRA-202ENST00000318266 LCP2Q13094 533 aa9.54□□□□□ -0.88
PTPRA-202ENST00000318266 ZBTB6Q15916 424 aa9.54□□□□□ -0.88
PTPRA-202ENST00000318266 CRY1Q16526 586 aa9.54□□□□□ -0.88
PTPRA-202ENST00000318266 KYAT1Q16773 422 aa9.54□□□□□ -0.88
PTPRA-202ENST00000318266 DET1Q7L5Y6 550 aa9.54□□□□□ -0.88
PTPRA-202ENST00000318266 CYP2U1Q7Z449 544 aa9.54□□□□□ -0.88
PTPRA-202ENST00000318266 LYSMD2Q8IV50 215 aa9.54□□□□□ -0.88
PTPRA-202ENST00000318266 MMAAQ8IVH4 418 aaKnown RBP9.54□□□□□ -0.88
PTPRA-202ENST00000318266 UBE2FQ969M7 185 aa9.54□□□□□ -0.88
PTPRA-202ENST00000318266 SLC47A1Q96FL8 570 aa9.54□□□□□ -0.88
PTPRA-202ENST00000318266 NIPSNAP3AQ9UFN0 247 aaPredicted RBP9.54□□□□□ -0.88
PTPRA-202ENST00000318266 UBQLN1Q9UMX0 589 aaKnown RBP9.54□□□□□ -0.88
PTPRA-202ENST00000318266 A0A1W2PQ67 120 aa9.53□□□□□ -0.88
PTPRA-202ENST00000318266 CDC7O00311 574 aa9.53□□□□□ -0.88
PTPRA-202ENST00000318266 NUAK1O60285 661 aa9.53□□□□□ -0.88
PTPRA-202ENST00000318266 OR4F21O95013 312 aa9.53□□□□□ -0.88
PTPRA-202ENST00000318266 GSNP06396 782 aa9.53□□□□□ -0.88
PTPRA-202ENST00000318266 MASP1P48740 699 aa9.53□□□□□ -0.88
PTPRA-202ENST00000318266 CDK5R2Q13319 367 aa9.53□□□□□ -0.88
PTPRA-202ENST00000318266 SLC27A1Q6PCB7 646 aa9.53□□□□□ -0.88
PTPRA-202ENST00000318266 BEND5Q7L4P6 421 aa9.53□□□□□ -0.88
PTPRA-202ENST00000318266 PHACTR4Q8IZ21 702 aa9.53□□□□□ -0.88
PTPRA-202ENST00000318266 CELF2-AS1Q8N7Q2 184 aa9.53□□□□□ -0.88
PTPRA-202ENST00000318266 MINDY2Q8NBR6 621 aa9.53□□□□□ -0.88
PTPRA-202ENST00000318266 ZNF540Q8NDQ6 660 aa9.53□□□□□ -0.88
PTPRA-202ENST00000318266 OR2T12Q8NG77 320 aa9.53□□□□□ -0.88
PTPRA-202ENST00000318266 DYNC2LI1Q8TCX1 351 aa9.53□□□□□ -0.88
PTPRA-202ENST00000318266 ATL1Q8WXF7 558 aa9.53□□□□□ -0.88
PTPRA-202ENST00000318266 LGALS12Q96DT0 336 aa9.53□□□□□ -0.88
PTPRA-202ENST00000318266 BARD1Q99728 777 aaKnown RBP9.53□□□□□ -0.88
PTPRA-202ENST00000318266 PRKD2Q9BZL6 878 aa9.53□□□□□ -0.88
PTPRA-202ENST00000318266 MUC13Q9H3R2 512 aa9.53□□□□□ -0.88
PTPRA-202ENST00000318266 CRTAC1Q9NQ79 661 aa9.53□□□□□ -0.88
PTPRA-202ENST00000318266 PIN4Q9Y237 131 aaKnown RBP9.53□□□□□ -0.88
PTPRA-202ENST00000318266 ASB1Q9Y576 335 aa9.53□□□□□ -0.88
PTPRA-202ENST00000318266 ARL5AQ9Y689 179 aa9.53□□□□□ -0.88
PTPRA-202ENST00000318266 RLFQ13129 1914 aa9.53□□□□□ -0.88
PTPRA-202ENST00000318266 ILVBLA1L0T0 632 aa9.53□□□□□ -0.88
PTPRA-202ENST00000318266 ARVCFO00192 962 aa9.53□□□□□ -0.88
PTPRA-202ENST00000318266 TAF4O00268 1085 aa9.53□□□□□ -0.88
PTPRA-202ENST00000318266 SSX4O60224 188 aa9.53□□□□□ -0.88
PTPRA-202ENST00000318266 CCNKO75909 580 aa9.53□□□□□ -0.88
PTPRA-202ENST00000318266 FGF4P08620 206 aa9.53□□□□□ -0.88
PTPRA-202ENST00000318266 G6PDP11413 515 aa9.53□□□□□ -0.88
PTPRA-202ENST00000318266 ZNF37AP17032 561 aaPredicted RBP9.53□□□□□ -0.88
PTPRA-202ENST00000318266 CCNCP24863 283 aa9.53□□□□□ -0.88
PTPRA-202ENST00000318266 HOXD11P31277 338 aaPredicted RBP9.53□□□□□ -0.88
PTPRA-202ENST00000318266 PPP2R2BQ00005 443 aa9.53□□□□□ -0.88
PTPRA-202ENST00000318266 EPS8Q12929 822 aa9.53□□□□□ -0.88
PTPRA-202ENST00000318266 PRKG2Q13237 762 aa9.53□□□□□ -0.88
PTPRA-202ENST00000318266 CLCA4Q14CN2 919 aa9.53□□□□□ -0.88
PTPRA-202ENST00000318266 INTS6LQ5JSJ4 861 aaKnown RBP9.53□□□□□ -0.88
PTPRA-202ENST00000318266 LAIR1Q6GTX8 287 aa9.53□□□□□ -0.88
PTPRA-202ENST00000318266 RIOX2Q8IUF8 465 aa9.53□□□□□ -0.88
PTPRA-202ENST00000318266 PIK3C3Q8NEB9 887 aa9.53□□□□□ -0.88
PTPRA-202ENST00000318266 ZMIZ2Q8NF64 920 aa9.53□□□□□ -0.88
PTPRA-202ENST00000318266 PCED1BQ96HM7 432 aa9.53□□□□□ -0.88
PTPRA-202ENST00000318266 DMRTB1Q96MA1 342 aa9.53□□□□□ -0.88
PTPRA-202ENST00000318266 ZFP42Q96MM3 310 aa9.53□□□□□ -0.88
PTPRA-202ENST00000318266 ZNF560Q96MR9 790 aa9.53□□□□□ -0.88
PTPRA-202ENST00000318266 IKZF5Q9H5V7 419 aa9.53□□□□□ -0.88
PTPRA-202ENST00000318266 MAGEE1Q9HCI5 957 aa9.53□□□□□ -0.88
PTPRA-202ENST00000318266 VAPAQ9P0L0 249 aa9.53□□□□□ -0.88
PTPRA-202ENST00000318266 C3orf18Q9UK00 162 aa9.53□□□□□ -0.88
PTPRA-202ENST00000318266 PCDHGA10Q9Y5H3 936 aa9.53□□□□□ -0.88
PTPRA-202ENST00000318266 NPEPPSL1A6NEC2 478 aa9.52□□□□□ -0.88
PTPRA-202ENST00000318266 MYO1GB0I1T2 1018 aa9.52□□□□□ -0.88
PTPRA-202ENST00000318266 PIRO00625 290 aa9.52□□□□□ -0.88
PTPRA-202ENST00000318266 MATN3O15232 486 aa9.52□□□□□ -0.88
PTPRA-202ENST00000318266 IDH3BO43837 385 aa9.52□□□□□ -0.88
PTPRA-202ENST00000318266 TULP3O75386 442 aa9.52□□□□□ -0.88
PTPRA-202ENST00000318266 KATNA1O75449 491 aa9.52□□□□□ -0.88
PTPRA-202ENST00000318266 DIRAS1O95057 198 aa9.52□□□□□ -0.88
PTPRA-202ENST00000318266 PGLSO95336 258 aa9.52□□□□□ -0.88
PTPRA-202ENST00000318266 CD36P16671 472 aa9.52□□□□□ -0.88
PTPRA-202ENST00000318266 EIF2DP41214 584 aaKnown RBP9.52□□□□□ -0.88
PTPRA-202ENST00000318266 HCAR3P49019 387 aa9.52□□□□□ -0.88
PTPRA-202ENST00000318266 SLC26A2P50443 739 aa9.52□□□□□ -0.88
PTPRA-202ENST00000318266 PPP5CP53041 499 aa9.52□□□□□ -0.88
PTPRA-202ENST00000318266 RACK1P63244 317 aaKnown RBP9.52□□□□□ -0.88
PTPRA-202ENST00000318266 CACNB2Q08289 660 aaPredicted RBP9.52□□□□□ -0.88
PTPRA-202ENST00000318266 GTF2H3Q13889 308 aa9.52□□□□□ -0.88
PTPRA-202ENST00000318266 SEMA3AQ14563 771 aa9.52□□□□□ -0.88
PTPRA-202ENST00000318266 SOWAHCQ53LP3 525 aaPredicted RBP9.52□□□□□ -0.88
PTPRA-202ENST00000318266 ZNF484Q5JVG2 852 aa9.52□□□□□ -0.88
PTPRA-202ENST00000318266 VARS2Q5ST30 1063 aaKnown RBP9.52□□□□□ -0.88
PTPRA-202ENST00000318266 ANKS6Q68DC2 871 aa9.52□□□□□ -0.88
PTPRA-202ENST00000318266 PAQR3Q6TCH7 311 aa9.52□□□□□ -0.88
PTPRA-202ENST00000318266 MILR1Q7Z6M3 343 aa9.52□□□□□ -0.88
PTPRA-202ENST00000318266 B3GNT8Q7Z7M8 397 aa9.52□□□□□ -0.88
PTPRA-202ENST00000318266 OR13C4Q8NGS5 318 aa9.52□□□□□ -0.88
PTPRA-202ENST00000318266 RHOXF1Q8NHV9 184 aa9.52□□□□□ -0.88
PTPRA-202ENST00000318266 BTN2A3PQ96KV6 586 aa9.52□□□□□ -0.88
PTPRA-202ENST00000318266 SLIRPQ9GZT3 109 aaKnown RBP9.52□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms