RNA–Protein interactions for RNA: ENST00000314289.12

RNF4-201, Transcript of ring finger protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF4, Length 3,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-201ENST00000314289 PFDN1O60925 122 aa12.25□□□□□ -0.45
RNF4-201ENST00000314289 CLPTM1O96005 669 aa12.25□□□□□ -0.45
RNF4-201ENST00000314289 PABPC1P11940 636 aaKnown RBP12.25□□□□□ -0.45
RNF4-201ENST00000314289 GRM2Q14416 872 aa12.25□□□□□ -0.45
RNF4-201ENST00000314289 SQLEQ14534 574 aa12.25□□□□□ -0.45
RNF4-201ENST00000314289 PIGGQ5H8A4 983 aa12.25□□□□□ -0.45
RNF4-201ENST00000314289 ZNF648Q5T619 568 aaPredicted RBP12.25□□□□□ -0.45
RNF4-201ENST00000314289 SNX20Q7Z614 316 aa12.25□□□□□ -0.45
RNF4-201ENST00000314289 JADE3Q92613 823 aa12.25□□□□□ -0.45
RNF4-201ENST00000314289 IRF7Q92985 503 aa12.25□□□□□ -0.45
RNF4-201ENST00000314289 ITFG2Q969R8 447 aa12.25□□□□□ -0.45
RNF4-201ENST00000314289 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.25□□□□□ -0.452e-6■■■■■ 54.9
RNF4-201ENST00000314289 TEX37Q96LM6 180 aa12.25□□□□□ -0.45
RNF4-201ENST00000314289 LRRC3BQ96PB8 259 aa12.25□□□□□ -0.45
RNF4-201ENST00000314289 CACNA2D2Q9NY47 1150 aa12.25□□□□□ -0.45
RNF4-201ENST00000314289 DHRS7Q9Y394 339 aa12.25□□□□□ -0.45
RNF4-201ENST00000314289 AK5Q9Y6K8 562 aa12.25□□□□□ -0.45
RNF4-201ENST00000314289 SMIM31A0A1B0GVY4 71 aa12.24□□□□□ -0.45
RNF4-201ENST00000314289 E2F3O00716 465 aa12.24□□□□□ -0.45
RNF4-201ENST00000314289 SNRPB2P08579 225 aaKnown RBP12.24□□□□□ -0.45
RNF4-201ENST00000314289 RPS17P08708 135 aaKnown RBP12.24□□□□□ -0.45
RNF4-201ENST00000314289 SMIM18P0DKX4 95 aa12.24□□□□□ -0.45
RNF4-201ENST00000314289 PTPN2P17706 415 aa12.24□□□□□ -0.45
RNF4-201ENST00000314289 PSMA3P25788 255 aa12.24□□□□□ -0.45
RNF4-201ENST00000314289 ACRV1P26436 265 aa12.24□□□□□ -0.45
RNF4-201ENST00000314289 PSME3P61289 254 aa12.24□□□□□ -0.45
RNF4-201ENST00000314289 GK3PQ14409 553 aa12.24□□□□□ -0.45
RNF4-201ENST00000314289 CAPRIN1Q14444 709 aaKnown RBP12.24□□□□□ -0.45
RNF4-201ENST00000314289 AAK1Q2M2I8 961 aa12.24□□□□□ -0.45
RNF4-201ENST00000314289 TCEAL5Q5H9L2 206 aa12.24□□□□□ -0.45
RNF4-201ENST00000314289 MPP7Q5T2T1 576 aa12.24□□□□□ -0.45
RNF4-201ENST00000314289 IYDQ6PHW0 289 aa12.24□□□□□ -0.45
RNF4-201ENST00000314289 SBSNQ6UWP8 590 aa12.24□□□□□ -0.45
RNF4-201ENST00000314289 RETREG3Q86VR2 466 aa12.24□□□□□ -0.45
RNF4-201ENST00000314289 PGAM4Q8N0Y7 254 aa12.24□□□□□ -0.45
RNF4-201ENST00000314289 OR2T11Q8NH01 316 aa12.24□□□□□ -0.45
RNF4-201ENST00000314289 ATP6V1E2Q96A05 226 aa12.24□□□□□ -0.45
RNF4-201ENST00000314289 ARMC5Q96C12 935 aa12.24□□□□□ -0.45
RNF4-201ENST00000314289 DCUN1D1Q96GG9 259 aa12.24□□□□□ -0.45
RNF4-201ENST00000314289 LMLNQ96KR4 655 aa12.24□□□□□ -0.45
RNF4-201ENST00000314289 RAD9AQ99638 391 aa12.24□□□□□ -0.45
RNF4-201ENST00000314289 EGFL8Q99944 293 aa12.24□□□□□ -0.45
RNF4-201ENST00000314289 TMEM106CQ9BVX2 250 aa12.24□□□□□ -0.45
RNF4-201ENST00000314289 B4GALT6Q9UBX8 382 aa12.24□□□□□ -0.45
RNF4-201ENST00000314289 STK39Q9UEW8 545 aa12.24□□□□□ -0.45
RNF4-201ENST00000314289 ZNF510Q9Y2H8 683 aa12.24□□□□□ -0.45
RNF4-201ENST00000314289 PCDHGA7Q9Y5G6 932 aa12.24□□□□□ -0.45
RNF4-201ENST00000314289 MRASO14807 208 aa12.24□□□□□ -0.45
RNF4-201ENST00000314289 SPAM1P38567 509 aa12.24□□□□□ -0.45
RNF4-201ENST00000314289 CASP2P42575 452 aa12.24□□□□□ -0.45
RNF4-201ENST00000314289 HTR6P50406 440 aa12.24□□□□□ -0.45
RNF4-201ENST00000314289 ERVPABLB-1P60509 514 aa12.24□□□□□ -0.45
RNF4-201ENST00000314289 STX1BP61266 288 aa12.24□□□□□ -0.45
RNF4-201ENST00000314289 MYBPC3Q14896 1274 aa12.24□□□□□ -0.45
RNF4-201ENST00000314289 RPS6KA2Q15349 733 aa12.24□□□□□ -0.45
RNF4-201ENST00000314289 SLC44A4Q53GD3 710 aa12.24□□□□□ -0.45
RNF4-201ENST00000314289 LETMD1Q6P1Q0 360 aa12.24□□□□□ -0.45
RNF4-201ENST00000314289 CYP2R1Q6VVX0 501 aa12.24□□□□□ -0.45
RNF4-201ENST00000314289 C7orf61Q8IZ16 206 aa12.24□□□□□ -0.45
RNF4-201ENST00000314289 RBFAQ8N0V3 343 aa12.24□□□□□ -0.45
RNF4-201ENST00000314289 ITFG1Q8TB96 612 aa12.24□□□□□ -0.45
RNF4-201ENST00000314289 PBXIP1Q96AQ6 731 aa12.24□□□□□ -0.45
RNF4-201ENST00000314289 VPS33AQ96AX1 596 aa12.24□□□□□ -0.45
RNF4-201ENST00000314289 BRD9Q9H8M2 597 aa12.24□□□□□ -0.45
RNF4-201ENST00000314289 SPHK2Q9NRA0 654 aa12.24□□□□□ -0.45
RNF4-201ENST00000314289 SLC25A13Q9UJS0 675 aa12.24□□□□□ -0.45
RNF4-201ENST00000314289 ANTXRLA6NF34 631 aa12.24□□□□□ -0.45
RNF4-201ENST00000314289 H3BNX3 289 aa12.24□□□□□ -0.45
RNF4-201ENST00000314289 FFAR3O14843 346 aa12.24□□□□□ -0.45
RNF4-201ENST00000314289 GPR42O15529 346 aa12.24□□□□□ -0.45
RNF4-201ENST00000314289 CEBPBP17676 345 aa12.24□□□□□ -0.45
RNF4-201ENST00000314289 VIPR2P41587 438 aa12.24□□□□□ -0.45
RNF4-201ENST00000314289 NADK2Q4G0N4 442 aa12.24□□□□□ -0.45
RNF4-201ENST00000314289 TMC5Q6UXY8 1006 aa12.24□□□□□ -0.45
RNF4-201ENST00000314289 ADIPOR2Q86V24 386 aa12.24□□□□□ -0.45
RNF4-201ENST00000314289 PHF12Q96QT6 1004 aa12.24□□□□□ -0.45
RNF4-201ENST00000314289 ELOVL2Q9NXB9 296 aa12.24□□□□□ -0.45
RNF4-201ENST00000314289 CIDEBQ9UHD4 219 aa12.24□□□□□ -0.45
RNF4-201ENST00000314289 TMCO1Q9UM00 188 aa12.24□□□□□ -0.45
RNF4-201ENST00000314289 LZTS1Q9Y250 596 aa12.24□□□□□ -0.45
RNF4-201ENST00000314289 GIPC1O14908 333 aa12.23□□□□□ -0.45
RNF4-201ENST00000314289 VILLO15195 856 aa12.23□□□□□ -0.45
RNF4-201ENST00000314289 PENKP01210 267 aaPredicted RBP12.23□□□□□ -0.45
RNF4-201ENST00000314289 GPX3P22352 226 aa12.23□□□□□ -0.45
RNF4-201ENST00000314289 PLIN5Q00G26 463 aa12.23□□□□□ -0.45
RNF4-201ENST00000314289 HSPA14Q0VDF9 509 aa12.23□□□□□ -0.45
RNF4-201ENST00000314289 CARD16Q5EG05 197 aa12.23□□□□□ -0.45
RNF4-201ENST00000314289 SGO1Q5FBB7 561 aa12.23□□□□□ -0.45
RNF4-201ENST00000314289 PHYKPLQ8IUZ5 450 aa12.23□□□□□ -0.45
RNF4-201ENST00000314289 STK40Q8N2I9 435 aa12.23□□□□□ -0.45
RNF4-201ENST00000314289 BEND7Q8N7W2 519 aaPredicted RBP12.23□□□□□ -0.45
RNF4-201ENST00000314289 OR2A12Q8NGT7 310 aa12.23□□□□□ -0.45
RNF4-201ENST00000314289 DGCR14Q96DF8 476 aaKnown RBP12.23□□□□□ -0.45
RNF4-201ENST00000314289 SCRN2Q96FV2 425 aa12.23□□□□□ -0.45
RNF4-201ENST00000314289 UBAP1Q9NZ09 502 aa12.23□□□□□ -0.45
RNF4-201ENST00000314289 HS3ST2Q9Y278 367 aa12.23□□□□□ -0.45
RNF4-201ENST00000314289 LINC01553A4QN01 128 aa12.23□□□□□ -0.45
RNF4-201ENST00000314289 PRORSD1PA6NEY8 169 aa12.23□□□□□ -0.45
RNF4-201ENST00000314289 FFAR2O15552 330 aa12.23□□□□□ -0.45
RNF4-201ENST00000314289 SOCS5O75159 536 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms