RNA–Protein interactions for RNA: ENST00000310546.2

SPSB4-201, Transcript of splA/ryanodine receptor domain and SOCS box containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB4, Length 2,908 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB4-201ENST00000310546 CCDC159P0C7I6 412 aa17.82■□□□□ 0.44
SPSB4-201ENST00000310546 HTR1EP28566 365 aa17.82■□□□□ 0.44
SPSB4-201ENST00000310546 MASP1P48740 699 aa17.82■□□□□ 0.44
SPSB4-201ENST00000310546 EPS8Q12929 822 aa17.82■□□□□ 0.44
SPSB4-201ENST00000310546 PCID2Q5JVF3 399 aa17.82■□□□□ 0.44
SPSB4-201ENST00000310546 TPRG1LQ5T0D9 272 aa17.82■□□□□ 0.44
SPSB4-201ENST00000310546 GPR158Q5T848 1215 aa17.82■□□□□ 0.44
SPSB4-201ENST00000310546 ENPP6Q6UWR7 440 aa17.82■□□□□ 0.44
SPSB4-201ENST00000310546 OR52K2Q8NGK3 314 aa17.82■□□□□ 0.44
SPSB4-201ENST00000310546 NSUN5Q96P11 429 aaKnown RBP17.82■□□□□ 0.44
SPSB4-201ENST00000310546 LRRC3Q9BY71 257 aa17.82■□□□□ 0.44
SPSB4-201ENST00000310546 CLPBQ9H078 707 aa17.82■□□□□ 0.44
SPSB4-201ENST00000310546 KAT8Q9H7Z6 458 aaKnown RBP17.82■□□□□ 0.44
SPSB4-201ENST00000310546 TRMT13Q9NUP7 481 aaKnown RBP17.82■□□□□ 0.44
SPSB4-201ENST00000310546 FBXO10Q9UK96 956 aa17.82■□□□□ 0.44
SPSB4-201ENST00000310546 PABPN1LA6NDY0 278 aaKnown RBP17.82■□□□□ 0.44
SPSB4-201ENST00000310546 ASB14A6NK59 587 aa17.82■□□□□ 0.44
SPSB4-201ENST00000310546 ACKR2O00590 384 aa17.82■□□□□ 0.44
SPSB4-201ENST00000310546 BCKDKO14874 412 aa17.82■□□□□ 0.44
SPSB4-201ENST00000310546 MT-ND2P03891 347 aa17.82■□□□□ 0.44
SPSB4-201ENST00000310546 FBXO48Q5FWF7 155 aa17.82■□□□□ 0.44
SPSB4-201ENST00000310546 ZNF691Q5VV52 312 aa17.82■□□□□ 0.44
SPSB4-201ENST00000310546 PHYKPLQ8IUZ5 450 aa17.82■□□□□ 0.44
SPSB4-201ENST00000310546 ZNF540Q8NDQ6 660 aa17.82■□□□□ 0.44
SPSB4-201ENST00000310546 RDH12Q96NR8 316 aa17.82■□□□□ 0.44
SPSB4-201ENST00000310546 RBM4BQ9BQ04 359 aaKnown RBP17.82■□□□□ 0.44
SPSB4-201ENST00000310546 RBM4Q9BWF3 364 aaKnown RBP17.82■□□□□ 0.44
SPSB4-201ENST00000310546 MMP27Q9H306 513 aa17.82■□□□□ 0.44
SPSB4-201ENST00000310546 DPEP3Q9H4B8 488 aa17.82■□□□□ 0.44
SPSB4-201ENST00000310546 CARS2Q9HA77 564 aaKnown RBP17.82■□□□□ 0.44
SPSB4-201ENST00000310546 WBP11Q9Y2W2 641 aaKnown RBP17.82■□□□□ 0.44
SPSB4-201ENST00000310546 M0QYT0 321 aa17.81■□□□□ 0.44
SPSB4-201ENST00000310546 DCLK1O15075 740 aa17.81■□□□□ 0.44
SPSB4-201ENST00000310546 MYCLP1P12525 358 aaPredicted RBP17.81■□□□□ 0.44
SPSB4-201ENST00000310546 S100A5P33763 92 aa17.81■□□□□ 0.44
SPSB4-201ENST00000310546 GGT5P36269 586 aa17.81■□□□□ 0.44
SPSB4-201ENST00000310546 SIM2Q14190 667 aaPredicted RBP17.81■□□□□ 0.44
SPSB4-201ENST00000310546 SPATS1Q496A3 300 aa17.81■□□□□ 0.44
SPSB4-201ENST00000310546 CES5AQ6NT32 575 aa17.81■□□□□ 0.44
SPSB4-201ENST00000310546 ARHGAP36Q6ZRI8 547 aa17.81■□□□□ 0.44
SPSB4-201ENST00000310546 PLEKHH3Q7Z736 793 aa17.81■□□□□ 0.44
SPSB4-201ENST00000310546 CNTN4Q8IWV2 1026 aa17.81■□□□□ 0.44
SPSB4-201ENST00000310546 OR6B3Q8NGW1 331 aa17.81■□□□□ 0.44
SPSB4-201ENST00000310546 FAM167AQ96KS9 214 aa17.81■□□□□ 0.44
SPSB4-201ENST00000310546 FDXACB1Q9BRP7 624 aaPredicted RBP17.81■□□□□ 0.44
SPSB4-201ENST00000310546 TINF2Q9BSI4 451 aa17.81■□□□□ 0.44
SPSB4-201ENST00000310546 ARHGAP39Q9C0H5 1083 aa17.81■□□□□ 0.44
SPSB4-201ENST00000310546 RPRD1BQ9NQG5 326 aaKnown RBP17.81■□□□□ 0.44
SPSB4-201ENST00000310546 MAGEL2Q9UJ55 1249 aa17.81■□□□□ 0.44
SPSB4-201ENST00000310546 PCDHGB1Q9Y5G3 927 aa17.81■□□□□ 0.44
SPSB4-201ENST00000310546 MYCP01106 439 aaPredicted RBP17.81■□□□□ 0.44
SPSB4-201ENST00000310546 SLC4A1P02730 911 aa17.81■□□□□ 0.44
SPSB4-201ENST00000310546 LCKP06239 509 aa17.81■□□□□ 0.44
SPSB4-201ENST00000310546 MATKP42679 507 aa17.81■□□□□ 0.44
SPSB4-201ENST00000310546 DEFA1P59665 94 aa17.81■□□□□ 0.44
SPSB4-201ENST00000310546 DEFA3P59666 94 aa17.81■□□□□ 0.44
SPSB4-201ENST00000310546 RCAN2Q14206 197 aa17.81■□□□□ 0.44
SPSB4-201ENST00000310546 MXD4Q14582 209 aaPredicted RBP17.81■□□□□ 0.44
SPSB4-201ENST00000310546 TMEM132DQ14C87 1099 aa17.81■□□□□ 0.44
SPSB4-201ENST00000310546 SMN1Q16637 294 aaKnown RBP17.81■□□□□ 0.44
SPSB4-201ENST00000310546 SYT6Q5T7P8 510 aaPredicted RBP17.81■□□□□ 0.44
SPSB4-201ENST00000310546 TRAF7Q6Q0C0 670 aa17.81■□□□□ 0.44
SPSB4-201ENST00000310546 SCIMPQ6UWF3 145 aa17.81■□□□□ 0.44
SPSB4-201ENST00000310546 JPH3Q8WXH2 748 aaPredicted RBP17.81■□□□□ 0.44
SPSB4-201ENST00000310546 C14orf119Q9NWQ9 140 aa17.81■□□□□ 0.44
SPSB4-201ENST00000310546 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP17.81■□□□□ 0.44
SPSB4-201ENST00000310546 SNX6Q9UNH7 406 aa17.81■□□□□ 0.44
SPSB4-201ENST00000310546 PLXNA1Q9UIW2 1896 aa17.8■□□□□ 0.44
SPSB4-201ENST00000310546 H3BRB1 525 aa17.8■□□□□ 0.44
SPSB4-201ENST00000310546 ERVH48-1M5A8F1 160 aa17.8■□□□□ 0.44
SPSB4-201ENST00000310546 HAT1O14929 419 aa17.8■□□□□ 0.44
SPSB4-201ENST00000310546 MTSS1O43312 755 aa17.8■□□□□ 0.44
SPSB4-201ENST00000310546 ACVR2AP27037 513 aa17.8■□□□□ 0.44
SPSB4-201ENST00000310546 TKTL1P51854 596 aa17.8■□□□□ 0.44
SPSB4-201ENST00000310546 SLC25A52Q3SY17 297 aa17.8■□□□□ 0.44
SPSB4-201ENST00000310546 BRMS1LQ5PSV4 323 aa17.8■□□□□ 0.44
SPSB4-201ENST00000310546 PLPPR4Q7Z2D5 763 aa17.8■□□□□ 0.44
SPSB4-201ENST00000310546 B3GNT8Q7Z7M8 397 aa17.8■□□□□ 0.44
SPSB4-201ENST00000310546 PARK7Q99497 189 aaKnown RBP17.8■□□□□ 0.44
SPSB4-201ENST00000310546 GPR45Q9Y5Y3 372 aa17.8■□□□□ 0.44
SPSB4-201ENST00000310546 SHROOM3Q8TF72 1996 aa17.8■□□□□ 0.44
SPSB4-201ENST00000310546 CRCPO75575 148 aa17.8■□□□□ 0.44
SPSB4-201ENST00000310546 ANXA6P08133 673 aa17.8■□□□□ 0.44
SPSB4-201ENST00000310546 CYP2C18P33260 490 aa17.8■□□□□ 0.44
SPSB4-201ENST00000310546 HERVK_113P63132 956 aa17.8■□□□□ 0.44
SPSB4-201ENST00000310546 GPLD1P80108 840 aa17.8■□□□□ 0.44
SPSB4-201ENST00000310546 IER5Q5VY09 327 aa17.8■□□□□ 0.44
SPSB4-201ENST00000310546 PDZD4Q76G19 769 aaPredicted RBP17.8■□□□□ 0.44
SPSB4-201ENST00000310546 PRSS48Q7RTY5 328 aa17.8■□□□□ 0.44
SPSB4-201ENST00000310546 CELF6Q96J87 481 aaKnown RBP17.8■□□□□ 0.44
SPSB4-201ENST00000310546 ERVK-6Q9BXR3 956 aa17.8■□□□□ 0.44
SPSB4-201ENST00000310546 COMMD8Q9NX08 183 aa17.8■□□□□ 0.44
SPSB4-201ENST00000310546 FBXL12Q9NXK8 326 aa17.8■□□□□ 0.44
SPSB4-201ENST00000310546 QPCTLQ9NXS2 382 aa17.8■□□□□ 0.44
SPSB4-201ENST00000310546 DNAJB9Q9UBS3 223 aa17.8■□□□□ 0.44
SPSB4-201ENST00000310546 LIMD1Q9UGP4 676 aa17.8■□□□□ 0.44
SPSB4-201ENST00000310546 LEF1Q9UJU2 399 aaPredicted RBP17.8■□□□□ 0.44
SPSB4-201ENST00000310546 SPEF1Q9Y4P9 236 aa17.8■□□□□ 0.44
SPSB4-201ENST00000310546 NRCAMQ92823 1304 aa17.8■□□□□ 0.44
SPSB4-201ENST00000310546 CITO14578 2027 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms