RNA–Protein interactions for RNA: ENST00000309934.4

SEC22A-201, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC22A, Length 4,228 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-201ENST00000309934 ACVRL1P37023 503 aa5.93□□□□□ -1.46
SEC22A-201ENST00000309934 TNFRSF4P43489 277 aa5.93□□□□□ -1.46
SEC22A-201ENST00000309934 CD97P48960 835 aa5.93□□□□□ -1.46
SEC22A-201ENST00000309934 AQP5P55064 265 aa5.93□□□□□ -1.46
SEC22A-201ENST00000309934 PITX1P78337 314 aaPredicted RBP5.93□□□□□ -1.46
SEC22A-201ENST00000309934 LMAN2Q12907 356 aa5.93□□□□□ -1.46
SEC22A-201ENST00000309934 ELAVL3Q14576 367 aaKnown RBP5.93□□□□□ -1.46
SEC22A-201ENST00000309934 FASTKD3Q14CZ7 662 aaKnown RBP5.93□□□□□ -1.46
SEC22A-201ENST00000309934 OTUD1Q5VV17 481 aaPredicted RBP5.93□□□□□ -1.46
SEC22A-201ENST00000309934 KRT80Q6KB66 452 aa5.93□□□□□ -1.46
SEC22A-201ENST00000309934 FKBP9P1Q75LS8 142 aa5.93□□□□□ -1.46
SEC22A-201ENST00000309934 ZDHHC14Q8IZN3 488 aa5.93□□□□□ -1.46
SEC22A-201ENST00000309934 CCDC33Q8N5R6 958 aa5.93□□□□□ -1.46
SEC22A-201ENST00000309934 NPWQ8N729 165 aa5.93□□□□□ -1.46
SEC22A-201ENST00000309934 TERB1Q8NA31 727 aa5.93□□□□□ -1.46
SEC22A-201ENST00000309934 BCL7CQ8WUZ0 217 aaPredicted RBP5.93□□□□□ -1.46
SEC22A-201ENST00000309934 VPS35Q96QK1 796 aa5.93□□□□□ -1.46
SEC22A-201ENST00000309934 SLC29A3Q9BZD2 475 aa5.93□□□□□ -1.46
SEC22A-201ENST00000309934 OSBPL6Q9BZF3 934 aa5.93□□□□□ -1.46
SEC22A-201ENST00000309934 PFDN2Q9UHV9 154 aa5.93□□□□□ -1.46
SEC22A-201ENST00000309934 FNDC3AQ9Y2H6 1198 aaKnown RBP5.93□□□□□ -1.46
SEC22A-201ENST00000309934 NDUFAF1Q9Y375 327 aa5.93□□□□□ -1.46
SEC22A-201ENST00000309934 C16orf96A6NNT2 1141 aa5.92□□□□□ -1.46
SEC22A-201ENST00000309934 H7C0S8 307 aa5.92□□□□□ -1.46
SEC22A-201ENST00000309934 BTN3A1O00481 513 aa5.92□□□□□ -1.46
SEC22A-201ENST00000309934 DLL1O00548 723 aa5.92□□□□□ -1.46
SEC22A-201ENST00000309934 TYROBPO43914 113 aa5.92□□□□□ -1.46
SEC22A-201ENST00000309934 PRAMEF1O95521 474 aa5.92□□□□□ -1.46
SEC22A-201ENST00000309934 MT-CYBP00156 380 aaPredicted RBP5.92□□□□□ -1.46
SEC22A-201ENST00000309934 DBTP11182 482 aaKnown RBP5.92□□□□□ -1.46
SEC22A-201ENST00000309934 EPB42P16452 691 aa5.92□□□□□ -1.46
SEC22A-201ENST00000309934 PSMC3P17980 439 aa5.92□□□□□ -1.46
SEC22A-201ENST00000309934 LBPP18428 481 aa5.92□□□□□ -1.46
SEC22A-201ENST00000309934 SLC1A2P43004 574 aa5.92□□□□□ -1.46
SEC22A-201ENST00000309934 AFF1P51825 1210 aaKnown RBP5.92□□□□□ -1.46
SEC22A-201ENST00000309934 ALDH18A1P54886 795 aaKnown RBP5.92□□□□□ -1.46
SEC22A-201ENST00000309934 VBP1P61758 197 aa5.92□□□□□ -1.46
SEC22A-201ENST00000309934 CAMK2GQ13555 558 aaPredicted RBP5.92□□□□□ -1.46
SEC22A-201ENST00000309934 TSC22D1Q15714 1073 aa5.92□□□□□ -1.46
SEC22A-201ENST00000309934 QPCTQ16769 361 aa5.92□□□□□ -1.46
SEC22A-201ENST00000309934 TRMT5Q32P41 509 aaKnown RBP5.92□□□□□ -1.46
SEC22A-201ENST00000309934 ESRP1Q6NXG1 681 aaKnown RBP5.92□□□□□ -1.46
SEC22A-201ENST00000309934 LILRA6Q6PI73 481 aa5.92□□□□□ -1.46
SEC22A-201ENST00000309934 UTS2BQ765I0 119 aa5.92□□□□□ -1.46
SEC22A-201ENST00000309934 LRRC70Q7Z2Q7 622 aa5.92□□□□□ -1.46
SEC22A-201ENST00000309934 GRASPQ7Z6J2 395 aaPredicted RBP5.92□□□□□ -1.46
SEC22A-201ENST00000309934 OOSP2Q86WS3 158 aa5.92□□□□□ -1.46
SEC22A-201ENST00000309934 KLHDC8BQ8IXV7 354 aa5.92□□□□□ -1.46
SEC22A-201ENST00000309934 KRT78Q8N1N4 520 aa5.92□□□□□ -1.46
SEC22A-201ENST00000309934 LILRB1Q8NHL6 650 aaPredicted RBP5.92□□□□□ -1.46
SEC22A-201ENST00000309934 RP9Q8TA86 221 aaKnown RBP5.92□□□□□ -1.46
SEC22A-201ENST00000309934 AKAP1Q92667 903 aaKnown RBP eCLIP5.92□□□□□ -1.46
SEC22A-201ENST00000309934 TMEM237Q96Q45 408 aa5.92□□□□□ -1.46
SEC22A-201ENST00000309934 SHCBP1LQ9BZQ2 653 aa5.92□□□□□ -1.46
SEC22A-201ENST00000309934 MLXIPLQ9NP71 852 aa5.92□□□□□ -1.46
SEC22A-201ENST00000309934 ALG13Q9NP73 1137 aaKnown RBP5.92□□□□□ -1.46
SEC22A-201ENST00000309934 DAPK2Q9UIK4 370 aa5.92□□□□□ -1.46
SEC22A-201ENST00000309934 PRPF19Q9UMS4 504 aaKnown RBP5.92□□□□□ -1.46
SEC22A-201ENST00000309934 NME7Q9Y5B8 376 aa5.92□□□□□ -1.46
SEC22A-201ENST00000309934 A0A088AWK7 358 aa5.92□□□□□ -1.46
SEC22A-201ENST00000309934 TCRBV7S3A2A0A539 114 aa5.92□□□□□ -1.46
SEC22A-201ENST00000309934 H0Y858 1186 aa5.92□□□□□ -1.46
SEC22A-201ENST00000309934 TNFRSF10AO00220 468 aa5.92□□□□□ -1.46
SEC22A-201ENST00000309934 VEGFDO43915 354 aa5.92□□□□□ -1.46
SEC22A-201ENST00000309934 DEAF1O75398 565 aaPredicted RBP5.92□□□□□ -1.46
SEC22A-201ENST00000309934 KRT36O76013 467 aa5.92□□□□□ -1.46
SEC22A-201ENST00000309934 WFS1O76024 890 aa5.92□□□□□ -1.46
SEC22A-201ENST00000309934 CLPTM1O96005 669 aa5.92□□□□□ -1.46
SEC22A-201ENST00000309934 PAHP00439 452 aa5.92□□□□□ -1.46
SEC22A-201ENST00000309934 PROCP04070 461 aa5.92□□□□□ -1.46
SEC22A-201ENST00000309934 SPATA31D3P0C874 917 aa5.92□□□□□ -1.46
SEC22A-201ENST00000309934 ZNF10P21506 573 aaPredicted RBP5.92□□□□□ -1.46
SEC22A-201ENST00000309934 PSMA4P25789 261 aaKnown RBP5.92□□□□□ -1.46
SEC22A-201ENST00000309934 PGM1P36871 562 aa5.92□□□□□ -1.46
SEC22A-201ENST00000309934 HSPA13P48723 471 aa5.92□□□□□ -1.46
SEC22A-201ENST00000309934 ATP4BP51164 291 aa5.92□□□□□ -1.46
SEC22A-201ENST00000309934 NUP107P57740 925 aa5.92□□□□□ -1.46
SEC22A-201ENST00000309934 DCDC1P59894 354 aa5.92□□□□□ -1.46
SEC22A-201ENST00000309934 BST1Q10588 318 aa5.92□□□□□ -1.46
SEC22A-201ENST00000309934 DHCR24Q15392 516 aa5.92□□□□□ -1.46
SEC22A-201ENST00000309934 C4orf46Q504U0 113 aa5.92□□□□□ -1.46
SEC22A-201ENST00000309934 ATP6AP1LQ52LC2 224 aa5.92□□□□□ -1.46
SEC22A-201ENST00000309934 CLVS2Q5SYC1 327 aa5.92□□□□□ -1.46
SEC22A-201ENST00000309934 Q6ZNB5 142 aa5.92□□□□□ -1.46
SEC22A-201ENST00000309934 SPATA31D4Q6ZUB0 917 aa5.92□□□□□ -1.46
SEC22A-201ENST00000309934 TAS1R1Q7RTX1 841 aa5.92□□□□□ -1.46
SEC22A-201ENST00000309934 KRT73Q86Y46 540 aa5.92□□□□□ -1.46
SEC22A-201ENST00000309934 BBS7Q8IWZ6 715 aa5.92□□□□□ -1.46
SEC22A-201ENST00000309934 LINC00469Q8N7U9 141 aa5.92□□□□□ -1.46
SEC22A-201ENST00000309934 ZNF366Q8N895 744 aa5.92□□□□□ -1.46
SEC22A-201ENST00000309934 DLG3Q92796 817 aa5.92□□□□□ -1.46
SEC22A-201ENST00000309934 MFSD3Q96ES6 412 aa5.92□□□□□ -1.46
SEC22A-201ENST00000309934 TM6SF2Q9BZW4 377 aa5.92□□□□□ -1.46
SEC22A-201ENST00000309934 ITM2CQ9NQX7 267 aa5.92□□□□□ -1.46
SEC22A-201ENST00000309934 OXSMQ9NWU1 459 aa5.92□□□□□ -1.46
SEC22A-201ENST00000309934 OSER1Q9NX31 292 aa5.92□□□□□ -1.46
SEC22A-201ENST00000309934 ELOVL2Q9NXB9 296 aa5.92□□□□□ -1.46
SEC22A-201ENST00000309934 CORO2BQ9UQ03 480 aa5.92□□□□□ -1.46
SEC22A-201ENST00000309934 SLC27A6Q9Y2P4 619 aa5.92□□□□□ -1.46
SEC22A-201ENST00000309934 SPACA6W5XKT8 324 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms