RNA–Protein interactions for RNA: ENST00000309190.9

CAST-201, Transcript of calpastatin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CAST, Length 4,282 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-201ENST00000309190 LRIT3Q3SXY7 679 aa4.88□□□□□ -1.63
CAST-201ENST00000309190 SNX30Q5VWJ9 437 aa4.88□□□□□ -1.63
CAST-201ENST00000309190 MSANTD2Q6P1R3 559 aa4.88□□□□□ -1.63
CAST-201ENST00000309190 MAMSTRQ6ZN01 415 aa4.88□□□□□ -1.63
CAST-201ENST00000309190 DGLUCYQ7Z3D6 616 aa4.88□□□□□ -1.63
CAST-201ENST00000309190 SLC22A15Q8IZD6 547 aa4.88□□□□□ -1.63
CAST-201ENST00000309190 NUDT8Q8WV74 236 aa4.88□□□□□ -1.63
CAST-201ENST00000309190 ZNF75CPQ92670 426 aaPredicted RBP4.88□□□□□ -1.63
CAST-201ENST00000309190 NXNL1Q96CM4 212 aa4.88□□□□□ -1.63
CAST-201ENST00000309190 EID2BQ96D98 161 aa4.88□□□□□ -1.63
CAST-201ENST00000309190 CERS2Q96G23 380 aa4.88□□□□□ -1.63
CAST-201ENST00000309190 BTBD1Q9H0C5 482 aa4.88□□□□□ -1.63
CAST-201ENST00000309190 GBA3Q9H227 469 aa4.88□□□□□ -1.63
CAST-201ENST00000309190 CD274Q9NZQ7 290 aa4.88□□□□□ -1.63
CAST-201ENST00000309190 SMG5Q9UPR3 1016 aaKnown RBP4.88□□□□□ -1.63
CAST-201ENST00000309190 ASF1AQ9Y294 204 aa4.88□□□□□ -1.63
CAST-201ENST00000309190 TIMM22Q9Y584 194 aa4.88□□□□□ -1.63
CAST-201ENST00000309190 ZNF462Q96JM2 2506 aa4.88□□□□□ -1.63
CAST-201ENST00000309190 A0A096LPK6 155 aa4.88□□□□□ -1.63
CAST-201ENST00000309190 RAD51BO15315 384 aa4.88□□□□□ -1.63
CAST-201ENST00000309190 CD3EAPO15446 510 aaKnown RBP4.88□□□□□ -1.63
CAST-201ENST00000309190 KDELR3O43731 214 aa4.88□□□□□ -1.63
CAST-201ENST00000309190 NME6O75414 186 aaPredicted RBP4.88□□□□□ -1.63
CAST-201ENST00000309190 CBX6O95503 412 aa4.88□□□□□ -1.63
CAST-201ENST00000309190 NDST3O95803 873 aa4.88□□□□□ -1.63
CAST-201ENST00000309190 C6P13671 934 aa4.88□□□□□ -1.63
CAST-201ENST00000309190 LPOP22079 712 aaPredicted RBP4.88□□□□□ -1.63
CAST-201ENST00000309190 CCNCP24863 283 aa4.88□□□□□ -1.63
CAST-201ENST00000309190 PHBP35232 272 aa4.88□□□□□ -1.63
CAST-201ENST00000309190 RPL34P49207 117 aaKnown RBP4.88□□□□□ -1.63
CAST-201ENST00000309190 ACTR3P61158 418 aa4.88□□□□□ -1.63
CAST-201ENST00000309190 HTR4Q13639 388 aa4.88□□□□□ -1.63
CAST-201ENST00000309190 NFE2L1Q14494 772 aa4.88□□□□□ -1.63
CAST-201ENST00000309190 SEMA3AQ14563 771 aa4.88□□□□□ -1.63
CAST-201ENST00000309190 VWA5B1Q5TIE3 1220 aa4.88□□□□□ -1.63
CAST-201ENST00000309190 GPR153Q6NV75 609 aa4.88□□□□□ -1.63
CAST-201ENST00000309190 ERAP2Q6P179 960 aa4.88□□□□□ -1.63
CAST-201ENST00000309190 PAQR3Q6TCH7 311 aa4.88□□□□□ -1.63
CAST-201ENST00000309190 USP45Q70EL2 814 aa4.88□□□□□ -1.63
CAST-201ENST00000309190 TAF8Q7Z7C8 310 aa4.88□□□□□ -1.63
CAST-201ENST00000309190 SDCCAG8Q86SQ7 713 aaPredicted RBP4.88□□□□□ -1.63
CAST-201ENST00000309190 PDSS2Q86YH6 399 aa4.88□□□□□ -1.63
CAST-201ENST00000309190 AHI1Q8N157 1196 aa4.88□□□□□ -1.63
CAST-201ENST00000309190 METTL25Q8N6Q8 603 aa4.88□□□□□ -1.63
CAST-201ENST00000309190 AMER2Q8N7J2 671 aa4.88□□□□□ -1.63
CAST-201ENST00000309190 HIPK4Q8NE63 616 aa4.88□□□□□ -1.63
CAST-201ENST00000309190 ARRDC2Q8TBH0 407 aa4.88□□□□□ -1.63
CAST-201ENST00000309190 PSKH2Q96QS6 385 aa4.88□□□□□ -1.63
CAST-201ENST00000309190 CYTH2Q99418 400 aa4.88□□□□□ -1.63
CAST-201ENST00000309190 EBNA1BP2Q99848 306 aaKnown RBP4.88□□□□□ -1.63
CAST-201ENST00000309190 SLC25A51Q9H1U9 297 aa4.88□□□□□ -1.63
CAST-201ENST00000309190 S1PR5Q9H228 398 aa4.88□□□□□ -1.63
CAST-201ENST00000309190 LRRC40Q9H9A6 602 aa4.88□□□□□ -1.63
CAST-201ENST00000309190 IL1RL2Q9HB29 575 aa4.88□□□□□ -1.63
CAST-201ENST00000309190 ZIM2Q9NZV7 527 aa4.88□□□□□ -1.63
CAST-201ENST00000309190 HAO1Q9UJM8 370 aa4.88□□□□□ -1.63
CAST-201ENST00000309190 PCDHGB4Q9UN71 923 aa4.88□□□□□ -1.63
CAST-201ENST00000309190 PCDHGB5Q9Y5G0 923 aa4.88□□□□□ -1.63
CAST-201ENST00000309190 USH1CQ9Y6N9 552 aa4.88□□□□□ -1.63
CAST-201ENST00000309190 GLYATL1P3A0A0U1RQE8 302 aa4.87□□□□□ -1.63
CAST-201ENST00000309190 TMEM233B4DJY2 109 aa4.87□□□□□ -1.63
CAST-201ENST00000309190 LAMTOR5O43504 91 aa4.87□□□□□ -1.63
CAST-201ENST00000309190 CCNT2O60583 730 aaKnown RBP4.87□□□□□ -1.63
CAST-201ENST00000309190 SUN1O94901 812 aa4.87□□□□□ -1.63
CAST-201ENST00000309190 AP2A1O95782 977 aa4.87□□□□□ -1.63
CAST-201ENST00000309190 CELA2BP08218 269 aaPredicted RBP4.87□□□□□ -1.63
CAST-201ENST00000309190 AOC1P19801 751 aa4.87□□□□□ -1.63
CAST-201ENST00000309190 MSH3P20585 1137 aa4.87□□□□□ -1.63
CAST-201ENST00000309190 BGNP21810 368 aa4.87□□□□□ -1.63
CAST-201ENST00000309190 YBEYP58557 167 aaPredicted RBP4.87□□□□□ -1.63
CAST-201ENST00000309190 MRPS35P82673 323 aaKnown RBP4.87□□□□□ -1.63
CAST-201ENST00000309190 RING1Q06587 406 aa4.87□□□□□ -1.63
CAST-201ENST00000309190 USP4Q13107 963 aa4.87□□□□□ -1.63
CAST-201ENST00000309190 MORF4L2Q15014 288 aa4.87□□□□□ -1.63
CAST-201ENST00000309190 CAPRIN2Q6IMN6 1127 aaKnown RBP4.87□□□□□ -1.63
CAST-201ENST00000309190 FSTL4Q6MZW2 842 aa4.87□□□□□ -1.63
CAST-201ENST00000309190 LVRNQ6Q4G3 990 aa4.87□□□□□ -1.63
CAST-201ENST00000309190 CYS1Q717R9 158 aa4.87□□□□□ -1.63
CAST-201ENST00000309190 TAOK1Q7L7X3 1001 aa4.87□□□□□ -1.63
CAST-201ENST00000309190 UMODL1-AS1Q8N2C9 162 aa4.87□□□□□ -1.63
CAST-201ENST00000309190 LZTR1Q8N653 840 aa4.87□□□□□ -1.63
CAST-201ENST00000309190 DCAF4L2Q8NA75 395 aa4.87□□□□□ -1.63
CAST-201ENST00000309190 OR4L1Q8NH43 312 aa4.87□□□□□ -1.63
CAST-201ENST00000309190 TCP10LQ8TDR4 215 aa4.87□□□□□ -1.63
CAST-201ENST00000309190 SPDL1Q96EA4 605 aa4.87□□□□□ -1.63
CAST-201ENST00000309190 VPS39Q96JC1 886 aa4.87□□□□□ -1.63
CAST-201ENST00000309190 MRGPRX1Q96LB2 322 aa4.87□□□□□ -1.63
CAST-201ENST00000309190 C7orf26Q96N11 449 aa4.87□□□□□ -1.63
CAST-201ENST00000309190 SLC30A3Q99726 388 aa4.87□□□□□ -1.63
CAST-201ENST00000309190 IL26Q9NPH9 171 aa4.87□□□□□ -1.63
CAST-201ENST00000309190 PTGDR2Q9Y5Y4 395 aa4.87□□□□□ -1.63
CAST-201ENST00000309190 CROCCQ5TZA2 2017 aa4.87□□□□□ -1.63
CAST-201ENST00000309190 RELNP78509 3460 aa4.87□□□□□ -1.63
CAST-201ENST00000309190 LOC105378220A0A1B0GUY1 285 aaPredicted RBP4.87□□□□□ -1.63
CAST-201ENST00000309190 FAM95CA0A1B0GW59 222 aa4.87□□□□□ -1.63
CAST-201ENST00000309190 OR2W5A6NFC9 320 aa4.87□□□□□ -1.63
CAST-201ENST00000309190 CDC7O00311 574 aa4.87□□□□□ -1.63
CAST-201ENST00000309190 TM9SF1O15321 606 aa4.87□□□□□ -1.63
CAST-201ENST00000309190 HNRNPCL1O60812 293 aaKnown RBP4.87□□□□□ -1.63
CAST-201ENST00000309190 ADAM23O75077 832 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms