RNA–Protein interactions for RNA: ENST00000306641.1

CSPG4P1Y-201, Transcript of CSPG4 pseudogene 1 Y-linked, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P1Y, Length 795 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P1Y-201ENST00000306641 TMED2Q15363 201 aa10.79□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 TYSND1Q2T9J0 566 aa10.79□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 MAP9Q49MG5 647 aa10.79□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 MSS51Q4VC12 460 aa10.79□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 GLE1Q53GS7 698 aaKnown RBP10.79□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 HP1BP3Q5SSJ5 553 aaPredicted RBP10.79□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 AGAP9Q5VTM2 703 aa10.79□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 NEPROQ6NW34 567 aa10.79□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 IYDQ6PHW0 289 aa10.79□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 WASH2PQ6VEQ5 465 aa10.79□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 TMPRSS12Q86WS5 348 aa10.79□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 LRRC6Q86X45 466 aa10.79□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 C17orf82Q86X59 251 aaPredicted RBP10.79□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 CILP2Q8IUL8 1156 aa10.79□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 SFTPA2Q8IWL1 248 aa10.79□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 CFAP206Q8IYR0 622 aa10.79□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 CHCHD4Q8N4Q1 142 aa10.79□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 CLDN19Q8N6F1 224 aa10.79□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 Q8N9G6 341 aaPredicted RBP10.79□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 GPR150Q8NGU9 434 aa10.79□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 AHCYL2Q96HN2 611 aaKnown RBP10.79□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 C12orf66Q96MD2 445 aa10.79□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 FCRL3Q96P31 734 aaPredicted RBP10.79□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 DEPDC7Q96QD5 511 aa10.79□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 GFM1Q96RP9 751 aaKnown RBP10.79□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 TCF12Q99081 682 aa10.79□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 LRRC1Q9BTT6 524 aa10.79□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 CCDC68Q9H2F9 335 aa10.79□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 COG4Q9H9E3 785 aa10.79□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 SARS2Q9NP81 518 aaKnown RBP10.79□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 PPANQ9NQ55 473 aaKnown RBP10.79□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 WASH6PQ9NQA3 447 aa10.79□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 INTS10Q9NVR2 710 aaKnown RBP10.79□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 KCNK4Q9NYG8 393 aa10.79□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 IL1RAPL1Q9NZN1 696 aa10.79□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 ANGPTL2Q9UKU9 493 aa10.79□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 PSMD13Q9UNM6 376 aa10.79□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 PCDHB1Q9Y5F3 818 aa10.79□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 FAM169AQ9Y6X4 670 aa10.79□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 MED19A0JLT2 244 aaPredicted RBP10.78□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 A6NCN8 305 aa10.78□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 E5RI56 91 aa10.78□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 H3BMM5 538 aa10.78□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 LIN7AO14910 233 aaPredicted RBP10.78□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 EIF3HO15372 352 aaKnown RBP eCLIP10.78□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 SGTAO43765 313 aa10.78□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 TCEA3O75764 348 aa10.78□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 JUPP14923 745 aa10.78□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 ITGB6P18564 788 aa10.78□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 RPS3P23396 243 aaKnown RBP eCLIP10.78□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 ALDH4A1P30038 563 aa10.78□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 SLC1A2P43004 574 aa10.78□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 GPR3P46089 330 aa10.78□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 ARCN1P48444 511 aaKnown RBP10.78□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 GPLD1P80108 840 aa10.78□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 INSM1Q01101 510 aaPredicted RBP10.78□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 FOXK2Q01167 660 aa10.78□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 PLOD1Q02809 727 aaPredicted RBP10.78□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 KRT33BQ14525 404 aa10.78□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 METRNLQ641Q3 311 aa10.78□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 ABRAXAS1Q6UWZ7 409 aa10.78□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 RBM44Q6ZP01 1051 aaKnown RBP10.78□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 FAM83HQ6ZRV2 1179 aaPredicted RBP10.78□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 CEP128Q6ZU80 1094 aa10.78□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 ZNF438Q7Z4V0 828 aa10.78□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 SPRED1Q7Z699 444 aa10.78□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 CCDC25Q86WR0 208 aa10.78□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 ANKMY2Q8IV38 441 aa10.78□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 RBM12BQ8IXT5 1001 aaKnown RBP10.78□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 ZBED8Q8IZ13 594 aa10.78□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 AGGF1Q8N302 714 aaeCLIP10.78□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 FBXO36Q8NEA4 188 aa10.78□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 GSDMBQ8TAX9 411 aa10.78□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 PYROXD1Q8WU10 500 aa10.78□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 ART4Q93070 314 aa10.78□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 TMEM159Q96B96 161 aa10.78□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 CERS2Q96G23 380 aa10.78□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 PWWP2AQ96N64 755 aa10.78□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 CARD6Q9BX69 1037 aa10.78□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 PHACTR1Q9C0D0 580 aa10.78□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 WWP1Q9H0M0 922 aa10.78□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 LRRN3Q9H3W5 708 aa10.78□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 EPB41L5Q9HCM4 733 aa10.78□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 SAYSD1Q9NPB0 183 aa10.78□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 FAM114A2Q9NRY5 505 aa10.78□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 IARS2Q9NSE4 1012 aaKnown RBP10.78□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 IMP3Q9NV31 184 aaKnown RBP10.78□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 GRHL1Q9NZI5 618 aa10.78□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 CPNE7Q9UBL6 633 aa10.78□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 MTRF1LQ9UGC7 380 aaKnown RBP10.78□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 CLCA2Q9UQC9 943 aa10.78□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 HEBP2Q9Y5Z4 205 aa10.78□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 TEX264Q9Y6I9 313 aa10.78□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 PRSS21Q9Y6M0 314 aa10.78□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 SPTBN4Q9H254 2564 aa10.78□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 PRR19A6NJB7 356 aa10.77□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 OR52A4PA6NMU1 304 aa10.77□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 E7ESA3 106 aa10.77□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 DUX1O43812 170 aa10.77□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 MT-CO3P00414 261 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms