RNA–Protein interactions for RNA: ENST00000305364.8

TRIM35-201, Transcript of tripartite motif containing 35, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM35, Length 4,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-201ENST00000305364 CAPN1P07384 714 aa12.87□□□□□ -0.35
TRIM35-201ENST00000305364 IL12RB1P42701 662 aa12.87□□□□□ -0.35
TRIM35-201ENST00000305364 HNRNPFP52597 415 aaKnown RBP12.87□□□□□ -0.35
TRIM35-201ENST00000305364 CCL15Q16663 113 aa12.87□□□□□ -0.35
TRIM35-201ENST00000305364 FAM174BQ3ZCQ3 159 aa12.87□□□□□ -0.35
TRIM35-201ENST00000305364 ENPP6Q6UWR7 440 aa12.87□□□□□ -0.35
TRIM35-201ENST00000305364 MFSD6LQ8IWD5 586 aa12.87□□□□□ -0.35
TRIM35-201ENST00000305364 OR9Q1Q8NGQ5 310 aa12.87□□□□□ -0.35
TRIM35-201ENST00000305364 HASPINQ8TF76 798 aa12.87□□□□□ -0.35
TRIM35-201ENST00000305364 GPR21Q99679 349 aa12.87□□□□□ -0.35
TRIM35-201ENST00000305364 IKZF3Q9UKT9 509 aa12.87□□□□□ -0.35
TRIM35-201ENST00000305364 AREL1O15033 823 aa12.87□□□□□ -0.35
TRIM35-201ENST00000305364 FGF10O15520 208 aaPredicted RBP12.87□□□□□ -0.35
TRIM35-201ENST00000305364 GOT2P00505 430 aaKnown RBP12.87□□□□□ -0.35
TRIM35-201ENST00000305364 EGFRP00533 1210 aa12.87□□□□□ -0.35
TRIM35-201ENST00000305364 MT-ND2P03891 347 aa12.87□□□□□ -0.35
TRIM35-201ENST00000305364 CNPP09543 421 aaKnown RBP12.87□□□□□ -0.35
TRIM35-201ENST00000305364 ADARB1P78563 741 aaKnown RBP12.87□□□□□ -0.35
TRIM35-201ENST00000305364 PTPRCAPQ14761 206 aa12.87□□□□□ -0.35
TRIM35-201ENST00000305364 INAVAQ3KP66 663 aa12.87□□□□□ -0.35
TRIM35-201ENST00000305364 PLEKHG6Q3KR16 790 aa12.87□□□□□ -0.35
TRIM35-201ENST00000305364 KCTD11Q693B1 232 aa12.87□□□□□ -0.35
TRIM35-201ENST00000305364 ZNF544Q6NX49 715 aa12.87□□□□□ -0.35
TRIM35-201ENST00000305364 NEK5Q6P3R8 708 aa12.87□□□□□ -0.35
TRIM35-201ENST00000305364 PIK3C3Q8NEB9 887 aa12.87□□□□□ -0.35
TRIM35-201ENST00000305364 ATL1Q8WXF7 558 aa12.87□□□□□ -0.35
TRIM35-201ENST00000305364 CNDP2Q96KP4 475 aaKnown RBP12.87□□□□□ -0.35
TRIM35-201ENST00000305364 ADARB2Q9NS39 739 aaKnown RBP12.87□□□□□ -0.35
TRIM35-201ENST00000305364 SRCAPQ6ZRS2 3230 aa12.87□□□□□ -0.35
TRIM35-201ENST00000305364 STX7O15400 261 aaKnown RBP12.87□□□□□ -0.35
TRIM35-201ENST00000305364 CPNE6O95741 557 aa12.87□□□□□ -0.35
TRIM35-201ENST00000305364 POU1F1P28069 291 aa12.87□□□□□ -0.35
TRIM35-201ENST00000305364 S100A3P33764 101 aa12.87□□□□□ -0.35
TRIM35-201ENST00000305364 LHX1P48742 406 aa12.87□□□□□ -0.35
TRIM35-201ENST00000305364 LILRA4P59901 499 aa12.87□□□□□ -0.35
TRIM35-201ENST00000305364 EMX1Q04741 257 aaPredicted RBP12.87□□□□□ -0.35
TRIM35-201ENST00000305364 MFSD14CQ5VZR4 134 aa12.87□□□□□ -0.35
TRIM35-201ENST00000305364 NEK10Q6ZWH5 1172 aa12.87□□□□□ -0.35
TRIM35-201ENST00000305364 ZDHHC21Q8IVQ6 265 aa12.87□□□□□ -0.35
TRIM35-201ENST00000305364 OR6J1Q8NGC5 347 aa12.87□□□□□ -0.35
TRIM35-201ENST00000305364 HMGCLL1Q8TB92 370 aa12.87□□□□□ -0.35
TRIM35-201ENST00000305364 PARK7Q99497 189 aaKnown RBP12.87□□□□□ -0.35
TRIM35-201ENST00000305364 AGO3Q9H9G7 860 aaKnown RBP12.87□□□□□ -0.35
TRIM35-201ENST00000305364 ZNF556Q9HAH1 456 aa12.87□□□□□ -0.35
TRIM35-201ENST00000305364 STRCP1A6NGW2 1772 aa12.87□□□□□ -0.35
TRIM35-201ENST00000305364 ADAMTSL1Q8N6G6 1762 aa12.87□□□□□ -0.35
TRIM35-201ENST00000305364 MYBPHLA2RUH7 354 aa12.86□□□□□ -0.35
TRIM35-201ENST00000305364 hCG_2039718K7EN88 272 aa12.86□□□□□ -0.35
TRIM35-201ENST00000305364 ACOX3O15254 700 aa12.86□□□□□ -0.35
TRIM35-201ENST00000305364 NUAK1O60285 661 aa12.86□□□□□ -0.35
TRIM35-201ENST00000305364 G6PDP11413 515 aa12.86□□□□□ -0.35
TRIM35-201ENST00000305364 KRT6CP48668 564 aa12.86□□□□□ -0.35
TRIM35-201ENST00000305364 HCAR3P49019 387 aa12.86□□□□□ -0.35
TRIM35-201ENST00000305364 GALNT1Q10472 559 aaPredicted RBP12.86□□□□□ -0.35
TRIM35-201ENST00000305364 AQP6Q13520 282 aa12.86□□□□□ -0.35
TRIM35-201ENST00000305364 CLCA4Q14CN2 919 aa12.86□□□□□ -0.35
TRIM35-201ENST00000305364 HIST2H2ACQ16777 129 aaPredicted RBP12.86□□□□□ -0.35
TRIM35-201ENST00000305364 SPATA2LQ8IUW3 424 aaPredicted RBP12.86□□□□□ -0.35
TRIM35-201ENST00000305364 TMEM132CQ8N3T6 1108 aa12.86□□□□□ -0.35
TRIM35-201ENST00000305364 GTF3C2Q8WUA4 911 aaPredicted RBP12.86□□□□□ -0.35
TRIM35-201ENST00000305364 PTERQ96BW5 349 aa12.86□□□□□ -0.35
TRIM35-201ENST00000305364 DOK1Q99704 481 aa12.86□□□□□ -0.35
TRIM35-201ENST00000305364 CPNE5Q9HCH3 593 aa12.86□□□□□ -0.35
TRIM35-201ENST00000305364 NECTIN3Q9NQS3 549 aa12.86□□□□□ -0.35
TRIM35-201ENST00000305364 C2orf81A6NN90 581 aa12.86□□□□□ -0.35
TRIM35-201ENST00000305364 FAM25AB3EWG3 89 aa12.86□□□□□ -0.35
TRIM35-201ENST00000305364 FAM25CB3EWG5 89 aa12.86□□□□□ -0.35
TRIM35-201ENST00000305364 FAM25GB3EWG6 89 aa12.86□□□□□ -0.35
TRIM35-201ENST00000305364 DIRAS1O95057 198 aa12.86□□□□□ -0.35
TRIM35-201ENST00000305364 CPSF4O95639 269 aaKnown RBP12.86□□□□□ -0.35
TRIM35-201ENST00000305364 ALPLP05186 524 aa12.86□□□□□ -0.35
TRIM35-201ENST00000305364 CD40LGP29965 261 aa12.86□□□□□ -0.35
TRIM35-201ENST00000305364 AGTR2P50052 363 aa12.86□□□□□ -0.35
TRIM35-201ENST00000305364 TAB1Q15750 504 aa12.86□□□□□ -0.35
TRIM35-201ENST00000305364 NKAPQ8N5F7 415 aaKnown RBP12.86□□□□□ -0.35
TRIM35-201ENST00000305364 RDH12Q96NR8 316 aa12.86□□□□□ -0.35
TRIM35-201ENST00000305364 SLC25A51Q9H1U9 297 aa12.86□□□□□ -0.35
TRIM35-201ENST00000305364 TRPV5Q9NQA5 729 aa12.86□□□□□ -0.35
TRIM35-201ENST00000305364 CACNG4Q9UBN1 327 aa12.86□□□□□ -0.35
TRIM35-201ENST00000305364 CPA4Q9UI42 421 aa12.86□□□□□ -0.35
TRIM35-201ENST00000305364 KLHL20Q9Y2M5 609 aa12.86□□□□□ -0.35
TRIM35-201ENST00000305364 TMEM98Q9Y2Y6 226 aa12.86□□□□□ -0.35
TRIM35-201ENST00000305364 DERAQ9Y315 318 aa12.86□□□□□ -0.35
TRIM35-201ENST00000305364 IGKV6-21A0A0C4DH24 114 aa12.86□□□□□ -0.35
TRIM35-201ENST00000305364 CASTOR2A6NHX0 329 aa12.86□□□□□ -0.35
TRIM35-201ENST00000305364 TARM1B6A8C7 271 aa12.86□□□□□ -0.35
TRIM35-201ENST00000305364 B3GAT3O94766 335 aa12.86□□□□□ -0.35
TRIM35-201ENST00000305364 MATN4O95460 622 aa12.86□□□□□ -0.35
TRIM35-201ENST00000305364 SERPINF2P08697 491 aa12.86□□□□□ -0.35
TRIM35-201ENST00000305364 ZNF157P51786 506 aaPredicted RBP12.86□□□□□ -0.35
TRIM35-201ENST00000305364 HUNKP57058 714 aa12.86□□□□□ -0.35
TRIM35-201ENST00000305364 MADCAM1Q13477 382 aa12.86□□□□□ -0.35
TRIM35-201ENST00000305364 SPATS1Q496A3 300 aa12.86□□□□□ -0.35
TRIM35-201ENST00000305364 INO80DQ53TQ3 878 aaPredicted RBP12.86□□□□□ -0.35
TRIM35-201ENST00000305364 C9orf131Q5VYM1 1079 aa12.86□□□□□ -0.35
TRIM35-201ENST00000305364 CYP20A1Q6UW02 462 aa12.86□□□□□ -0.35
TRIM35-201ENST00000305364 ZNF605Q86T29 641 aa12.86□□□□□ -0.35
TRIM35-201ENST00000305364 THEM5Q8N1Q8 247 aa12.86□□□□□ -0.35
TRIM35-201ENST00000305364 PSD4Q8NDX1 1056 aa12.86□□□□□ -0.35
TRIM35-201ENST00000305364 OR6Q1Q8NGQ2 317 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms