RNA–Protein interactions for RNA: ENST00000301843.12

CTTN-201, Transcript of cortactin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTTN, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-201ENST00000301843 DLEU7Q6UYE1 221 aa13.36□□□□□ -0.27
CTTN-201ENST00000301843 C16orf59Q7L2K0 433 aa13.36□□□□□ -0.27
CTTN-201ENST00000301843 RBM12BQ8IXT5 1001 aaKnown RBP13.36□□□□□ -0.27
CTTN-201ENST00000301843 BRSK1Q8TDC3 778 aa13.36□□□□□ -0.27
CTTN-201ENST00000301843 FBXO32Q969P5 355 aa13.36□□□□□ -0.27
CTTN-201ENST00000301843 SACM1LQ9NTJ5 587 aa13.36□□□□□ -0.27
CTTN-201ENST00000301843 FBXO10Q9UK96 956 aa13.36□□□□□ -0.27
CTTN-201ENST00000301843 PTBP2Q9UKA9 531 aaKnown RBP13.36□□□□□ -0.27
CTTN-201ENST00000301843 TLR6Q9Y2C9 796 aa13.36□□□□□ -0.27
CTTN-201ENST00000301843 RBMX2Q9Y388 322 aaKnown RBP13.36□□□□□ -0.27
CTTN-201ENST00000301843 Q9Y3F1 56 aa13.36□□□□□ -0.27
CTTN-201ENST00000301843 COL4A4P53420 1690 aaPredicted RBP13.36□□□□□ -0.27
CTTN-201ENST00000301843 DOCK4Q8N1I0 1966 aa13.36□□□□□ -0.27
CTTN-201ENST00000301843 PRAMEF12O95522 483 aa13.36□□□□□ -0.27
CTTN-201ENST00000301843 ALPLP05186 524 aa13.36□□□□□ -0.27
CTTN-201ENST00000301843 SERPINF2P08697 491 aa13.36□□□□□ -0.27
CTTN-201ENST00000301843 RPS17P08708 135 aaKnown RBP13.36□□□□□ -0.27
CTTN-201ENST00000301843 INHBBP09529 407 aa13.36□□□□□ -0.27
CTTN-201ENST00000301843 MC4RP32245 332 aa13.36□□□□□ -0.27
CTTN-201ENST00000301843 HSPA7P48741 367 aa13.36□□□□□ -0.27
CTTN-201ENST00000301843 PRKG2Q13237 762 aa13.36□□□□□ -0.27
CTTN-201ENST00000301843 SERINC3Q13530 473 aa13.36□□□□□ -0.27
CTTN-201ENST00000301843 DAG1Q14118 895 aa13.36□□□□□ -0.27
CTTN-201ENST00000301843 DPY19L1Q2PZI1 675 aa13.36□□□□□ -0.27
CTTN-201ENST00000301843 AP5B1Q2VPB7 878 aa13.36□□□□□ -0.27
CTTN-201ENST00000301843 NADSYN1Q6IA69 706 aa13.36□□□□□ -0.27
CTTN-201ENST00000301843 MBOAT1Q6ZNC8 495 aa13.36□□□□□ -0.27
CTTN-201ENST00000301843 GCNT7Q6ZNI0 430 aa13.36□□□□□ -0.27
CTTN-201ENST00000301843 CLDN19Q8N6F1 224 aa13.36□□□□□ -0.27
CTTN-201ENST00000301843 BARD1Q99728 777 aaKnown RBP13.36□□□□□ -0.27
CTTN-201ENST00000301843 FUNDC2Q9BWH2 189 aa13.36□□□□□ -0.27
CTTN-201ENST00000301843 LRRC3Q9BY71 257 aa13.36□□□□□ -0.27
CTTN-201ENST00000301843 TMEM248Q9NWD8 314 aa13.36□□□□□ -0.27
CTTN-201ENST00000301843 FNDC1Q4ZHG4 1894 aaPredicted RBP13.36□□□□□ -0.27
CTTN-201ENST00000301843 TMEM247A6NEH6 219 aa13.35□□□□□ -0.27
CTTN-201ENST00000301843 CFAP99D6REC4 459 aa13.35□□□□□ -0.27
CTTN-201ENST00000301843 G3V2T6 193 aa13.35□□□□□ -0.27
CTTN-201ENST00000301843 CBX4O00257 560 aa13.35□□□□□ -0.27
CTTN-201ENST00000301843 E2F6O75461 281 aa13.35□□□□□ -0.27
CTTN-201ENST00000301843 PRKD3O94806 890 aa13.35□□□□□ -0.27
CTTN-201ENST00000301843 MBL2P11226 248 aaPredicted RBP13.35□□□□□ -0.27
CTTN-201ENST00000301843 CTPS1P17812 591 aa13.35□□□□□ -0.27
CTTN-201ENST00000301843 HTR1BP28222 390 aa13.35□□□□□ -0.27
CTTN-201ENST00000301843 ERVK-8P63133 956 aa13.35□□□□□ -0.27
CTTN-201ENST00000301843 CHRNB3Q05901 458 aa13.35□□□□□ -0.27
CTTN-201ENST00000301843 KCNAB2Q13303 367 aa13.35□□□□□ -0.27
CTTN-201ENST00000301843 DNASE1L3Q13609 305 aa13.35□□□□□ -0.27
CTTN-201ENST00000301843 FAM174BQ3ZCQ3 159 aa13.35□□□□□ -0.27
CTTN-201ENST00000301843 ZNF773Q6PK81 442 aa13.35□□□□□ -0.27
CTTN-201ENST00000301843 CYP20A1Q6UW02 462 aa13.35□□□□□ -0.27
CTTN-201ENST00000301843 USP51Q70EK9 711 aa13.35□□□□□ -0.27
CTTN-201ENST00000301843 HID1Q8IV36 788 aa13.35□□□□□ -0.27
CTTN-201ENST00000301843 OR4F6Q8NGB9 312 aa13.35□□□□□ -0.27
CTTN-201ENST00000301843 OSCP1Q8WVF1 389 aa13.35□□□□□ -0.27
CTTN-201ENST00000301843 GFM2Q969S9 779 aaKnown RBP13.35□□□□□ -0.27
CTTN-201ENST00000301843 SLC39A13Q96H72 371 aa13.35□□□□□ -0.27
CTTN-201ENST00000301843 CRISPLD1Q9H336 500 aa13.35□□□□□ -0.27
CTTN-201ENST00000301843 ADGRE2Q9UHX3 823 aa13.35□□□□□ -0.27
CTTN-201ENST00000301843 TRMT6Q9UJA5 497 aaKnown RBP13.35□□□□□ -0.27
CTTN-201ENST00000301843 CDH7Q9ULB5 785 aa13.35□□□□□ -0.27
CTTN-201ENST00000301843 SLC30A1Q9Y6M5 507 aa13.35□□□□□ -0.27
CTTN-201ENST00000301843 E2F3O00716 465 aa13.35□□□□□ -0.27
CTTN-201ENST00000301843 UROSP10746 265 aa13.35□□□□□ -0.27
CTTN-201ENST00000301843 FCGR1AP12314 374 aa13.35□□□□□ -0.27
CTTN-201ENST00000301843 CA5AP35218 305 aa13.35□□□□□ -0.27
CTTN-201ENST00000301843 MAP2K4P45985 399 aa13.35□□□□□ -0.27
CTTN-201ENST00000301843 CD47Q08722 323 aa13.35□□□□□ -0.27
CTTN-201ENST00000301843 SIM2Q14190 667 aaPredicted RBP13.35□□□□□ -0.27
CTTN-201ENST00000301843 SULT1C3Q6IMI6 304 aa13.35□□□□□ -0.27
CTTN-201ENST00000301843 CRTC3Q6UUV7 619 aa13.35□□□□□ -0.27
CTTN-201ENST00000301843 ZDHHC13Q8IUH4 622 aa13.35□□□□□ -0.27
CTTN-201ENST00000301843 SPARTQ8N0X7 666 aa13.35□□□□□ -0.27
CTTN-201ENST00000301843 CGREF1Q99674 301 aa13.35□□□□□ -0.27
CTTN-201ENST00000301843 ALOXE3Q9BYJ1 711 aa13.35□□□□□ -0.27
CTTN-201ENST00000301843 NSUN3Q9H649 340 aaKnown RBP13.35□□□□□ -0.27
CTTN-201ENST00000301843 CD320Q9NPF0 282 aa13.35□□□□□ -0.27
CTTN-201ENST00000301843 PAK1IP1Q9NWT1 392 aaPredicted RBP13.35□□□□□ -0.27
CTTN-201ENST00000301843 PNMA8BQ9ULN7 279 aaPredicted RBP13.35□□□□□ -0.27
CTTN-201ENST00000301843 GIT1Q9Y2X7 761 aa13.35□□□□□ -0.27
CTTN-201ENST00000301843 XIRP2A4UGR9 3374 aa13.35□□□□□ -0.27
CTTN-201ENST00000301843 MLYCDO95822 493 aa13.35□□□□□ -0.27
CTTN-201ENST00000301843 TSPAN12O95859 305 aa13.35□□□□□ -0.27
CTTN-201ENST00000301843 CRHBPP24387 322 aa13.35□□□□□ -0.27
CTTN-201ENST00000301843 FMO3P31513 532 aa13.35□□□□□ -0.27
CTTN-201ENST00000301843 FKBP1BP68106 108 aa13.35□□□□□ -0.27
CTTN-201ENST00000301843 EMX2Q04743 252 aa13.35□□□□□ -0.27
CTTN-201ENST00000301843 CTSL3PQ5NE16 218 aa13.35□□□□□ -0.27
CTTN-201ENST00000301843 BROXQ5VW32 411 aa13.35□□□□□ -0.27
CTTN-201ENST00000301843 TMEM236Q5W0B7 351 aa13.35□□□□□ -0.27
CTTN-201ENST00000301843 BPIFB1Q8TDL5 484 aa13.35□□□□□ -0.27
CTTN-201ENST00000301843 ADAMTS16Q8TE57 1224 aa13.35□□□□□ -0.27
CTTN-201ENST00000301843 LZICQ8WZA0 190 aa13.35□□□□□ -0.27
CTTN-201ENST00000301843 C5orf42Q9H799 3197 aa13.35□□□□□ -0.27
CTTN-201ENST00000301843 NT5C1B-RDH14C9J2C7 533 aa13.34□□□□□ -0.27
CTTN-201ENST00000301843 PRSS23O95084 383 aa13.34□□□□□ -0.27
CTTN-201ENST00000301843 PFKLP17858 780 aa13.34□□□□□ -0.27
CTTN-201ENST00000301843 EFNA1P20827 205 aaPredicted RBP13.34□□□□□ -0.27
CTTN-201ENST00000301843 RPL9P32969 192 aaKnown RBP13.34□□□□□ -0.27
CTTN-201ENST00000301843 ALDH3A2P51648 485 aa13.34□□□□□ -0.27
CTTN-201ENST00000301843 SGSHP51688 502 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms