RNA–Protein interactions for RNA: ENST00000300862.7

HIF3A-204, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HIF3A, Length 2,551 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-204ENST00000300862 ELMSAN1Q6PJG2 1045 aa12.72□□□□□ -0.37
HIF3A-204ENST00000300862 Q6ZNX1 250 aa12.72□□□□□ -0.37
HIF3A-204ENST00000300862 GOLGA7Q7Z5G4 137 aa12.72□□□□□ -0.37
HIF3A-204ENST00000300862 PAF1Q8N7H5 531 aa12.72□□□□□ -0.37
HIF3A-204ENST00000300862 SMYD1Q8NB12 490 aa12.72□□□□□ -0.37
HIF3A-204ENST00000300862 OR4F6Q8NGB9 312 aa12.72□□□□□ -0.37
HIF3A-204ENST00000300862 LKAAEAR1Q8TD35 194 aa12.72□□□□□ -0.37
HIF3A-204ENST00000300862 MAGEE2Q8TD90 523 aaPredicted RBP12.72□□□□□ -0.37
HIF3A-204ENST00000300862 KCNJ9Q92806 393 aa12.72□□□□□ -0.37
HIF3A-204ENST00000300862 C1QTNF3Q9BXJ4 246 aa12.72□□□□□ -0.37
HIF3A-204ENST00000300862 BRINP2Q9C0B6 783 aa12.72□□□□□ -0.37
HIF3A-204ENST00000300862 TMEM165Q9HC07 324 aa12.72□□□□□ -0.37
HIF3A-204ENST00000300862 HACD3Q9P035 362 aa12.72□□□□□ -0.37
HIF3A-204ENST00000300862 ZNHIT2Q9UHR6 403 aa12.72□□□□□ -0.37
HIF3A-204ENST00000300862 FAF1Q9UNN5 650 aaPredicted RBP12.72□□□□□ -0.37
HIF3A-204ENST00000300862 SH3PXD2BA1X283 911 aa12.72□□□□□ -0.37
HIF3A-204ENST00000300862 FFAR3O14843 346 aa12.72□□□□□ -0.37
HIF3A-204ENST00000300862 GPR42O15529 346 aa12.72□□□□□ -0.37
HIF3A-204ENST00000300862 TBL1XO60907 577 aa12.72□□□□□ -0.37
HIF3A-204ENST00000300862 GGT5P36269 586 aa12.72□□□□□ -0.37
HIF3A-204ENST00000300862 HSPA7P48741 367 aa12.72□□□□□ -0.37
HIF3A-204ENST00000300862 RHOAP61586 193 aa12.72□□□□□ -0.37
HIF3A-204ENST00000300862 ABRAXAS2Q15018 415 aa12.72□□□□□ -0.37
HIF3A-204ENST00000300862 RFTN2Q52LD8 501 aaPredicted RBP12.72□□□□□ -0.37
HIF3A-204ENST00000300862 INTS11Q5TA45 600 aaKnown RBP12.72□□□□□ -0.37
HIF3A-204ENST00000300862 NCEH1Q6PIU2 408 aa12.72□□□□□ -0.37
HIF3A-204ENST00000300862 TBPL2Q6SJ96 375 aa12.72□□□□□ -0.37
HIF3A-204ENST00000300862 WFDC5Q8TCV5 224 aa12.72□□□□□ -0.37
HIF3A-204ENST00000300862 BIRC7Q96CA5 298 aa12.72□□□□□ -0.37
HIF3A-204ENST00000300862 VPS50Q96JG6 964 aa12.72□□□□□ -0.37
HIF3A-204ENST00000300862 RNF145Q96MT1 663 aa12.72□□□□□ -0.37
HIF3A-204ENST00000300862 SLC22A12Q96S37 553 aa12.72□□□□□ -0.37
HIF3A-204ENST00000300862 APOL5Q9BWW9 433 aa12.72□□□□□ -0.37
HIF3A-204ENST00000300862 CIPCQ9C0C6 399 aa12.72□□□□□ -0.37
HIF3A-204ENST00000300862 ACTL8Q9H568 366 aa12.72□□□□□ -0.37
HIF3A-204ENST00000300862 RIC8BQ9NVN3 520 aa12.72□□□□□ -0.37
HIF3A-204ENST00000300862 IL17CQ9P0M4 197 aa12.72□□□□□ -0.37
HIF3A-204ENST00000300862 LHX3Q9UBR4 397 aa12.72□□□□□ -0.37
HIF3A-204ENST00000300862 EBF1Q9UH73 591 aa12.72□□□□□ -0.37
HIF3A-204ENST00000300862 SLC30A1Q9Y6M5 507 aa12.72□□□□□ -0.37
HIF3A-204ENST00000300862 PRRC2BQ5JSZ5 2229 aaKnown RBP12.71□□□□□ -0.37
HIF3A-204ENST00000300862 THSD7BQ9C0I4 1608 aa12.71□□□□□ -0.37
HIF3A-204ENST00000300862 TMX2-CTNND1H3BSU7 103 aa12.71□□□□□ -0.37
HIF3A-204ENST00000300862 OR7A17O14581 309 aa12.71□□□□□ -0.37
HIF3A-204ENST00000300862 TRIM16O95361 564 aa12.71□□□□□ -0.37
HIF3A-204ENST00000300862 MYCP01106 439 aaPredicted RBP12.71□□□□□ -0.37
HIF3A-204ENST00000300862 PCNAP12004 261 aa12.71□□□□□ -0.37
HIF3A-204ENST00000300862 UGT1A1P22309 533 aa12.71□□□□□ -0.37
HIF3A-204ENST00000300862 UGT1A4P22310 534 aa12.71□□□□□ -0.37
HIF3A-204ENST00000300862 UGT1A3P35503 534 aa12.71□□□□□ -0.37
HIF3A-204ENST00000300862 UGT1A5P35504 534 aa12.71□□□□□ -0.37
HIF3A-204ENST00000300862 FOXM1Q08050 763 aa12.71□□□□□ -0.37
HIF3A-204ENST00000300862 ILF2Q12905 390 aaKnown RBP12.71□□□□□ -0.37
HIF3A-204ENST00000300862 CBX3Q13185 183 aa12.71□□□□□ -0.37
HIF3A-204ENST00000300862 ATP6AP1Q15904 470 aa12.71□□□□□ -0.37
HIF3A-204ENST00000300862 TAF12Q16514 161 aa12.71□□□□□ -0.37
HIF3A-204ENST00000300862 OTUD3Q5T2D3 398 aaPredicted RBP12.71□□□□□ -0.37
HIF3A-204ENST00000300862 PTRHD1Q6GMV3 140 aaKnown RBP12.71□□□□□ -0.37
HIF3A-204ENST00000300862 MFSD2AQ8NA29 543 aa12.71□□□□□ -0.37
HIF3A-204ENST00000300862 SCLYQ96I15 445 aa12.71□□□□□ -0.37
HIF3A-204ENST00000300862 ZNF382Q96SR6 550 aa12.71□□□□□ -0.37
HIF3A-204ENST00000300862 TBCCD1Q9NVR7 557 aa12.71□□□□□ -0.37
HIF3A-204ENST00000300862 TRPM5Q9NZQ8 1165 aa12.71□□□□□ -0.37
HIF3A-204ENST00000300862 ANAPC2Q9UJX6 822 aa12.71□□□□□ -0.37
HIF3A-204ENST00000300862 VPS9D1Q9Y2B5 631 aa12.71□□□□□ -0.37
HIF3A-204ENST00000300862 PKP3Q9Y446 797 aa12.71□□□□□ -0.37
HIF3A-204ENST00000300862 ZNF711Q9Y462 761 aa12.71□□□□□ -0.37
HIF3A-204ENST00000300862 POLR3HQ9Y535 204 aaPredicted RBP12.71□□□□□ -0.37
HIF3A-204ENST00000300862 FAM234BA2RU67 622 aa12.71□□□□□ -0.38
HIF3A-204ENST00000300862 PFDN6O15212 129 aa12.71□□□□□ -0.38
HIF3A-204ENST00000300862 SNAP29O95721 258 aa12.71□□□□□ -0.38
HIF3A-204ENST00000300862 ESR1P03372 595 aa12.71□□□□□ -0.38
HIF3A-204ENST00000300862 RFC2P35250 354 aa12.71□□□□□ -0.38
HIF3A-204ENST00000300862 PTGER3P43115 390 aa12.71□□□□□ -0.38
HIF3A-204ENST00000300862 YAP1P46937 504 aaKnown RBP12.71□□□□□ -0.38
HIF3A-204ENST00000300862 PRKG2Q13237 762 aa12.71□□□□□ -0.38
HIF3A-204ENST00000300862 PLCL1Q15111 1095 aa12.71□□□□□ -0.38
HIF3A-204ENST00000300862 AP5B1Q2VPB7 878 aa12.71□□□□□ -0.38
HIF3A-204ENST00000300862 ANKDD1AQ495B1 522 aa12.71□□□□□ -0.38
HIF3A-204ENST00000300862 PDCD4Q53EL6 469 aaKnown RBP12.71□□□□□ -0.38
HIF3A-204ENST00000300862 SGO1Q5FBB7 561 aa12.71□□□□□ -0.38
HIF3A-204ENST00000300862 COQ5Q5HYK3 327 aa12.71□□□□□ -0.38
HIF3A-204ENST00000300862 SBSNQ6UWP8 590 aa12.71□□□□□ -0.38
HIF3A-204ENST00000300862 CHST15Q7LFX5 561 aaPredicted RBP12.71□□□□□ -0.38
HIF3A-204ENST00000300862 C9orf16Q9BUW7 83 aa12.71□□□□□ -0.38
HIF3A-204ENST00000300862 CHID1Q9BWS9 393 aa12.71□□□□□ -0.38
HIF3A-204ENST00000300862 VN1R3Q9BXE9 311 aa12.71□□□□□ -0.38
HIF3A-204ENST00000300862 OSBPL6Q9BZF3 934 aa12.71□□□□□ -0.38
HIF3A-204ENST00000300862 ABCG8Q9H221 673 aa12.71□□□□□ -0.38
HIF3A-204ENST00000300862 P2RY12Q9H244 342 aa12.71□□□□□ -0.38
HIF3A-204ENST00000300862 FARSBQ9NSD9 589 aaKnown RBP12.71□□□□□ -0.38
HIF3A-204ENST00000300862 COMMD8Q9NX08 183 aa12.71□□□□□ -0.38
HIF3A-204ENST00000300862 ELOVL2Q9NXB9 296 aa12.71□□□□□ -0.38
HIF3A-204ENST00000300862 SLC8A2Q9UPR5 921 aa12.71□□□□□ -0.38
HIF3A-204ENST00000300862 SH3GLB1Q9Y371 365 aa12.71□□□□□ -0.38
HIF3A-204ENST00000300862 MAGED1Q9Y5V3 778 aaPredicted RBP12.71□□□□□ -0.38
HIF3A-204ENST00000300862 PRSS21Q9Y6M0 314 aa12.71□□□□□ -0.38
HIF3A-204ENST00000300862 PRMT5O14744 637 aaPredicted RBP12.7□□□□□ -0.38
HIF3A-204ENST00000300862 GPIP06744 558 aa12.7□□□□□ -0.38
HIF3A-204ENST00000300862 PSMA3P25788 255 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms