RNA–Protein interactions for RNA: ENST00000300413.9

SNRPD1-201, Transcript of small nuclear ribonucleoprotein D1 polypeptide, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPD1, Length 4,909 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD1-201ENST00000300413 SEMA3AQ14563 771 aa8.19□□□□□ -1.1
SNRPD1-201ENST00000300413 ELOCQ15369 112 aa8.19□□□□□ -1.1
SNRPD1-201ENST00000300413 DPY19L1Q2PZI1 675 aa8.19□□□□□ -1.1
SNRPD1-201ENST00000300413 RANBP10Q6VN20 620 aa8.19□□□□□ -1.1
SNRPD1-201ENST00000300413 CAND1Q86VP6 1230 aaKnown RBP8.19□□□□□ -1.1
SNRPD1-201ENST00000300413 FSTL5Q8N475 847 aaPredicted RBP8.19□□□□□ -1.1
SNRPD1-201ENST00000300413 OXR1Q8N573 874 aa8.19□□□□□ -1.1
SNRPD1-201ENST00000300413 KCTD14Q9BQ13 255 aaPredicted RBP8.19□□□□□ -1.1
SNRPD1-201ENST00000300413 DPEP2Q9H4A9 486 aa8.19□□□□□ -1.1
SNRPD1-201ENST00000300413 ARNT2Q9HBZ2 717 aa8.19□□□□□ -1.1
SNRPD1-201ENST00000300413 HCFC1R1Q9NWW0 138 aa8.19□□□□□ -1.1
SNRPD1-201ENST00000300413 SCOCQ9UIL1 159 aa8.19□□□□□ -1.1
SNRPD1-201ENST00000300413 TMCC3Q9ULS5 477 aa8.19□□□□□ -1.1
SNRPD1-201ENST00000300413 DNMT3AQ9Y6K1 912 aaPredicted RBP8.19□□□□□ -1.1
SNRPD1-201ENST00000300413 SIPA1L1O43166 1804 aa8.19□□□□□ -1.1
SNRPD1-201ENST00000300413 HOXC11O43248 304 aaPredicted RBP8.19□□□□□ -1.1
SNRPD1-201ENST00000300413 GRID2O43424 1007 aa8.19□□□□□ -1.1
SNRPD1-201ENST00000300413 HS6ST1O60243 411 aa8.19□□□□□ -1.1
SNRPD1-201ENST00000300413 CACNG3O60359 315 aa8.19□□□□□ -1.1
SNRPD1-201ENST00000300413 POP7O75817 140 aaKnown RBP8.19□□□□□ -1.1
SNRPD1-201ENST00000300413 CYTH1Q15438 398 aa8.19□□□□□ -1.1
SNRPD1-201ENST00000300413 LAYNQ6UX15 382 aa8.19□□□□□ -1.1
SNRPD1-201ENST00000300413 GPR180Q86V85 440 aa8.19□□□□□ -1.1
SNRPD1-201ENST00000300413 SIDT2Q8NBJ9 832 aaKnown RBP8.19□□□□□ -1.1
SNRPD1-201ENST00000300413 OR10G6Q8NH81 332 aa8.19□□□□□ -1.1
SNRPD1-201ENST00000300413 USP7Q93009 1102 aa8.19□□□□□ -1.1
SNRPD1-201ENST00000300413 ITCHQ96J02 903 aa8.19□□□□□ -1.1
SNRPD1-201ENST00000300413 BTBD10Q9BSF8 475 aa8.19□□□□□ -1.1
SNRPD1-201ENST00000300413 UGT2B28Q9BY64 529 aa8.19□□□□□ -1.1
SNRPD1-201ENST00000300413 ADPRHL2Q9NX46 363 aa8.19□□□□□ -1.1
SNRPD1-201ENST00000300413 PCDHGA2Q9Y5H1 932 aa8.19□□□□□ -1.1
SNRPD1-201ENST00000300413 MYO1CO00159 1063 aa8.18□□□□□ -1.1
SNRPD1-201ENST00000300413 HMGA1P17096 107 aaKnown RBP8.18□□□□□ -1.1
SNRPD1-201ENST00000300413 IMPDH1P20839 514 aa8.18□□□□□ -1.1
SNRPD1-201ENST00000300413 TARSP26639 723 aaKnown RBP8.18□□□□□ -1.1
SNRPD1-201ENST00000300413 SERPINB3P29508 390 aa8.18□□□□□ -1.1
SNRPD1-201ENST00000300413 MAT2AP31153 395 aaKnown RBP8.18□□□□□ -1.1
SNRPD1-201ENST00000300413 DHPSP49366 369 aaPredicted RBP8.18□□□□□ -1.1
SNRPD1-201ENST00000300413 GTF2A1P52655 376 aaPredicted RBP8.18□□□□□ -1.1
SNRPD1-201ENST00000300413 CPSF6Q16630 551 aaKnown RBP eCLIP8.18□□□□□ -1.1
SNRPD1-201ENST00000300413 NEK5Q6P3R8 708 aa8.18□□□□□ -1.1
SNRPD1-201ENST00000300413 TRIM40Q6P9F5 258 aa8.18□□□□□ -1.1
SNRPD1-201ENST00000300413 TMPRSS11BQ86T26 416 aa8.18□□□□□ -1.1
SNRPD1-201ENST00000300413 APCDD1Q8J025 514 aa8.18□□□□□ -1.1
SNRPD1-201ENST00000300413 GLB1L3Q8NCI6 653 aaPredicted RBP8.18□□□□□ -1.1
SNRPD1-201ENST00000300413 KIAA1191Q96A73 305 aa8.18□□□□□ -1.1
SNRPD1-201ENST00000300413 NSMCE2Q96MF7 247 aa8.18□□□□□ -1.1
SNRPD1-201ENST00000300413 OR2M4Q96R27 311 aa8.18□□□□□ -1.1
SNRPD1-201ENST00000300413 AGAP2Q99490 1192 aa8.18□□□□□ -1.1
SNRPD1-201ENST00000300413 PREBQ9HCU5 417 aa8.18□□□□□ -1.1
SNRPD1-201ENST00000300413 SEMA3GQ9NS98 782 aa8.18□□□□□ -1.1
SNRPD1-201ENST00000300413 MTMR10Q9NXD2 777 aa8.18□□□□□ -1.1
SNRPD1-201ENST00000300413 LIMD1Q9UGP4 676 aa8.18□□□□□ -1.1
SNRPD1-201ENST00000300413 HS3ST2Q9Y278 367 aa8.18□□□□□ -1.1
SNRPD1-201ENST00000300413 PCDHGB3Q9Y5G1 929 aa8.18□□□□□ -1.1
SNRPD1-201ENST00000300413 SNX5Q9Y5X3 404 aa8.18□□□□□ -1.1
SNRPD1-201ENST00000300413 KIAA0100Q14667 2235 aaKnown RBP8.18□□□□□ -1.1
SNRPD1-201ENST00000300413 GRXCR1A8MXD5 290 aa8.18□□□□□ -1.1
SNRPD1-201ENST00000300413 KLF11O14901 512 aa8.18□□□□□ -1.1
SNRPD1-201ENST00000300413 FFAR2O15552 330 aa8.18□□□□□ -1.1
SNRPD1-201ENST00000300413 DNAJA2O60884 412 aa8.18□□□□□ -1.1
SNRPD1-201ENST00000300413 RNGTTO60942 597 aaKnown RBP8.18□□□□□ -1.1
SNRPD1-201ENST00000300413 LYPLA1O75608 230 aaPredicted RBP8.18□□□□□ -1.1
SNRPD1-201ENST00000300413 RECQL5O94762 991 aaPredicted RBP8.18□□□□□ -1.1
SNRPD1-201ENST00000300413 HLA-EP13747 358 aa8.18□□□□□ -1.1
SNRPD1-201ENST00000300413 NQO1P15559 274 aaKnown RBP8.18□□□□□ -1.1
SNRPD1-201ENST00000300413 CDH3P22223 829 aa8.18□□□□□ -1.1
SNRPD1-201ENST00000300413 PRDX6P30041 224 aa8.18□□□□□ -1.1
SNRPD1-201ENST00000300413 RRM2P31350 389 aa8.18□□□□□ -1.1
SNRPD1-201ENST00000300413 SSR2P43308 183 aa8.18□□□□□ -1.1
SNRPD1-201ENST00000300413 HERVK_113P63132 956 aa8.18□□□□□ -1.1
SNRPD1-201ENST00000300413 SLC18A2Q05940 514 aa8.18□□□□□ -1.1
SNRPD1-201ENST00000300413 FAM78AQ5JUQ0 283 aa8.18□□□□□ -1.1
SNRPD1-201ENST00000300413 ST13P4Q8IZP2 240 aaPredicted RBP8.18□□□□□ -1.1
SNRPD1-201ENST00000300413 RMDN2Q96LZ7 410 aa8.18□□□□□ -1.1
SNRPD1-201ENST00000300413 ERVK-6Q9BXR3 956 aa8.18□□□□□ -1.1
SNRPD1-201ENST00000300413 MVB12BQ9H7P6 319 aa8.18□□□□□ -1.1
SNRPD1-201ENST00000300413 IL1RL2Q9HB29 575 aa8.18□□□□□ -1.1
SNRPD1-201ENST00000300413 LRTM1Q9HBL6 345 aa8.18□□□□□ -1.1
SNRPD1-201ENST00000300413 HCSTQ9UBK5 93 aa8.18□□□□□ -1.1
SNRPD1-201ENST00000300413 GPN3Q9UHW5 284 aaPredicted RBP8.18□□□□□ -1.1
SNRPD1-201ENST00000300413 MRTO4Q9UKD2 239 aaKnown RBP8.18□□□□□ -1.1
SNRPD1-201ENST00000300413 VPS4AQ9UN37 437 aa8.18□□□□□ -1.1
SNRPD1-201ENST00000300413 CDC14AQ9UNH5 594 aa8.18□□□□□ -1.1
SNRPD1-201ENST00000300413 SNX7Q9UNH6 387 aa8.18□□□□□ -1.1
SNRPD1-201ENST00000300413 DHRS7Q9Y394 339 aa8.18□□□□□ -1.1
SNRPD1-201ENST00000300413 ZNF780BQ9Y6R6 833 aa8.18□□□□□ -1.1
SNRPD1-201ENST00000300413 TRPM7Q96QT4 1865 aa8.18□□□□□ -1.1
SNRPD1-201ENST00000300413 PDE9AO76083 593 aa8.18□□□□□ -1.1
SNRPD1-201ENST00000300413 ME2P23368 584 aa8.18□□□□□ -1.1
SNRPD1-201ENST00000300413 RPS3P23396 243 aaKnown RBP eCLIP8.18□□□□□ -1.1
SNRPD1-201ENST00000300413 VARSP26640 1264 aaKnown RBP8.18□□□□□ -1.1
SNRPD1-201ENST00000300413 GCKP35557 465 aa8.18□□□□□ -1.1
SNRPD1-201ENST00000300413 BUD31P41223 144 aaPredicted RBP8.18□□□□□ -1.1
SNRPD1-201ENST00000300413 STK19P49842 368 aaPredicted RBP8.18□□□□□ -1.1
SNRPD1-201ENST00000300413 RPL38P63173 70 aaKnown RBP8.18□□□□□ -1.1
SNRPD1-201ENST00000300413 TRAF2Q12933 501 aa8.18□□□□□ -1.1
SNRPD1-201ENST00000300413 BNIP2Q12982 314 aa8.18□□□□□ -1.1
SNRPD1-201ENST00000300413 RPA4Q13156 261 aa8.18□□□□□ -1.1
SNRPD1-201ENST00000300413 TSNQ15631 228 aaKnown RBP8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 85.3 ms