RNA–Protein interactions for RNA: ENST00000299162.9

FOXN4-201, Transcript of forkhead box N4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXN4, Length 3,350 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN4-201ENST00000299162 TUBB1Q9H4B7 451 aa9.98□□□□□ -0.81
FOXN4-201ENST00000299162 MTG2Q9H4K7 406 aa9.98□□□□□ -0.81
FOXN4-201ENST00000299162 NOL11Q9H8H0 719 aaKnown RBP9.98□□□□□ -0.81
FOXN4-201ENST00000299162 MED16Q9Y2X0 877 aa9.98□□□□□ -0.81
FOXN4-201ENST00000299162 RNF103-CHMP3A0A140T963 221 aa9.97□□□□□ -0.81
FOXN4-201ENST00000299162 ILVBLA1L0T0 632 aa9.97□□□□□ -0.81
FOXN4-201ENST00000299162 K7EPI3 171 aa9.97□□□□□ -0.81
FOXN4-201ENST00000299162 PLOD2O00469 737 aa9.97□□□□□ -0.81
FOXN4-201ENST00000299162 NRP2O60462 931 aa9.97□□□□□ -0.81
FOXN4-201ENST00000299162 CCL5P13501 91 aa9.97□□□□□ -0.81
FOXN4-201ENST00000299162 HSPA7P48741 367 aa9.97□□□□□ -0.81
FOXN4-201ENST00000299162 NKX3-2P78367 333 aa9.97□□□□□ -0.81
FOXN4-201ENST00000299162 RETREG3Q86VR2 466 aa9.97□□□□□ -0.81
FOXN4-201ENST00000299162 OFCC1Q8IZS5 231 aa9.97□□□□□ -0.81
FOXN4-201ENST00000299162 FNDC5Q8NAU1 212 aa9.97□□□□□ -0.81
FOXN4-201ENST00000299162 DDHD1Q8NEL9 900 aa9.97□□□□□ -0.81
FOXN4-201ENST00000299162 TEX37Q96LM6 180 aa9.97□□□□□ -0.81
FOXN4-201ENST00000299162 RANBP9Q96S59 729 aa9.97□□□□□ -0.81
FOXN4-201ENST00000299162 CWH43Q9H720 699 aa9.97□□□□□ -0.81
FOXN4-201ENST00000299162 ELAC1Q9H777 363 aaKnown RBP9.97□□□□□ -0.81
FOXN4-201ENST00000299162 NLE1Q9NVX2 485 aaPredicted RBP9.97□□□□□ -0.81
FOXN4-201ENST00000299162 SLAMF8Q9P0V8 285 aa9.97□□□□□ -0.81
FOXN4-201ENST00000299162 CRLS1Q9UJA2 301 aa9.97□□□□□ -0.81
FOXN4-201ENST00000299162 USP22Q9UPT9 525 aa9.97□□□□□ -0.81
FOXN4-201ENST00000299162 RNASEH2AO75792 299 aaKnown RBP9.97□□□□□ -0.81
FOXN4-201ENST00000299162 CD160O95971 181 aa9.97□□□□□ -0.81
FOXN4-201ENST00000299162 CD70P32970 193 aa9.97□□□□□ -0.81
FOXN4-201ENST00000299162 STX5Q13190 355 aa9.97□□□□□ -0.81
FOXN4-201ENST00000299162 TSTA3Q13630 321 aaPredicted RBP9.97□□□□□ -0.81
FOXN4-201ENST00000299162 CBX2Q14781 532 aaPredicted RBP9.97□□□□□ -0.81
FOXN4-201ENST00000299162 TAF1AQ15573 450 aaPredicted RBP9.97□□□□□ -0.81
FOXN4-201ENST00000299162 RABL3Q5HYI8 236 aa9.97□□□□□ -0.81
FOXN4-201ENST00000299162 CTSL3PQ5NE16 218 aa9.97□□□□□ -0.81
FOXN4-201ENST00000299162 TTC33Q6PID6 262 aaPredicted RBP9.97□□□□□ -0.81
FOXN4-201ENST00000299162 KBTBD6Q86V97 674 aa9.97□□□□□ -0.81
FOXN4-201ENST00000299162 CLHC1Q8NHS4 586 aa9.97□□□□□ -0.81
FOXN4-201ENST00000299162 SORCS1Q8WY21 1168 aa9.97□□□□□ -0.81
FOXN4-201ENST00000299162 FUBP1Q96AE4 644 aaKnown RBP9.97□□□□□ -0.81
FOXN4-201ENST00000299162 TMEM74Q96NL1 305 aa9.97□□□□□ -0.81
FOXN4-201ENST00000299162 BTBD9Q96Q07 612 aa9.97□□□□□ -0.81
FOXN4-201ENST00000299162 ATOH8Q96SQ7 321 aa9.97□□□□□ -0.81
FOXN4-201ENST00000299162 NSUN3Q9H649 340 aaKnown RBP9.97□□□□□ -0.81
FOXN4-201ENST00000299162 SYTL2Q9HCH5 934 aa9.97□□□□□ -0.81
FOXN4-201ENST00000299162 ZFP14Q9HCL3 533 aa9.97□□□□□ -0.81
FOXN4-201ENST00000299162 SACM1LQ9NTJ5 587 aa9.97□□□□□ -0.81
FOXN4-201ENST00000299162 POLG2Q9UHN1 485 aa9.97□□□□□ -0.81
FOXN4-201ENST00000299162 ANGPTL3Q9Y5C1 460 aa9.97□□□□□ -0.81
FOXN4-201ENST00000299162 PCDHGA7Q9Y5G6 932 aa9.97□□□□□ -0.81
FOXN4-201ENST00000299162 FADS3Q9Y5Q0 445 aa9.97□□□□□ -0.81
FOXN4-201ENST00000299162 INSL5Q9Y5Q6 135 aa9.97□□□□□ -0.81
FOXN4-201ENST00000299162 GON4LQ3T8J9 2241 aa9.97□□□□□ -0.81
FOXN4-201ENST00000299162 RFPL2O75678 378 aa9.97□□□□□ -0.81
FOXN4-201ENST00000299162 MTHFD1P11586 935 aaKnown RBP9.97□□□□□ -0.81
FOXN4-201ENST00000299162 ITGB8P26012 769 aa9.97□□□□□ -0.81
FOXN4-201ENST00000299162 HTR6P50406 440 aa9.97□□□□□ -0.81
FOXN4-201ENST00000299162 DNAJB13P59910 316 aa9.97□□□□□ -0.81
FOXN4-201ENST00000299162 ADGRE1Q14246 886 aa9.97□□□□□ -0.81
FOXN4-201ENST00000299162 SQLEQ14534 574 aa9.97□□□□□ -0.81
FOXN4-201ENST00000299162 INAQ16352 499 aa9.97□□□□□ -0.81
FOXN4-201ENST00000299162 SETMARQ53H47 684 aaPredicted RBP9.97□□□□□ -0.81
FOXN4-201ENST00000299162 IL27RAQ6UWB1 636 aa9.97□□□□□ -0.81
FOXN4-201ENST00000299162 SYVN1Q86TM6 617 aa9.97□□□□□ -0.81
FOXN4-201ENST00000299162 SERPINA9Q86WD7 417 aa9.97□□□□□ -0.81
FOXN4-201ENST00000299162 SPPL2CQ8IUH8 684 aa9.97□□□□□ -0.81
FOXN4-201ENST00000299162 KLHDC8BQ8IXV7 354 aa9.97□□□□□ -0.81
FOXN4-201ENST00000299162 MARVELD2Q8N4S9 558 aa9.97□□□□□ -0.81
FOXN4-201ENST00000299162 METTL6Q8TCB7 284 aa9.97□□□□□ -0.81
FOXN4-201ENST00000299162 LKAAEAR1Q8TD35 194 aa9.97□□□□□ -0.81
FOXN4-201ENST00000299162 BIRC8Q96P09 236 aa9.97□□□□□ -0.81
FOXN4-201ENST00000299162 CLPBQ9H078 707 aa9.97□□□□□ -0.81
FOXN4-201ENST00000299162 SOX17Q9H6I2 414 aaPredicted RBP9.97□□□□□ -0.81
FOXN4-201ENST00000299162 ZDHHC6Q9H6R6 413 aa9.97□□□□□ -0.81
FOXN4-201ENST00000299162 PLGRKTQ9HBL7 147 aa9.97□□□□□ -0.81
FOXN4-201ENST00000299162 PCDH12Q9NPG4 1184 aa9.97□□□□□ -0.81
FOXN4-201ENST00000299162 MRPL17Q9NRX2 175 aaKnown RBP9.97□□□□□ -0.81
FOXN4-201ENST00000299162 ABCB8Q9NUT2 735 aa9.97□□□□□ -0.81
FOXN4-201ENST00000299162 ZDHHC7Q9NXF8 308 aa9.97□□□□□ -0.81
FOXN4-201ENST00000299162 CCL26Q9Y258 94 aa9.97□□□□□ -0.81
FOXN4-201ENST00000299162 THSD7BQ9C0I4 1608 aa9.97□□□□□ -0.81
FOXN4-201ENST00000299162 KDM1AO60341 852 aa9.96□□□□□ -0.81
FOXN4-201ENST00000299162 KCNH1O95259 989 aa9.96□□□□□ -0.81
FOXN4-201ENST00000299162 CAPN3P20807 821 aa9.96□□□□□ -0.81
FOXN4-201ENST00000299162 HK3P52790 923 aa9.96□□□□□ -0.81
FOXN4-201ENST00000299162 BCL2L1Q07817 233 aa9.96□□□□□ -0.81
FOXN4-201ENST00000299162 OGFRL1Q5TC84 451 aaPredicted RBP9.96□□□□□ -0.81
FOXN4-201ENST00000299162 EGFLAMQ63HQ2 1017 aa9.96□□□□□ -0.81
FOXN4-201ENST00000299162 MILR1Q7Z6M3 343 aa9.96□□□□□ -0.81
FOXN4-201ENST00000299162 FUNDC1Q8IVP5 155 aa9.96□□□□□ -0.81
FOXN4-201ENST00000299162 REM2Q8IYK8 340 aaPredicted RBP9.96□□□□□ -0.81
FOXN4-201ENST00000299162 PDZD8Q8NEN9 1154 aa9.96□□□□□ -0.81
FOXN4-201ENST00000299162 C12orf43Q96C57 262 aaKnown RBP9.96□□□□□ -0.81
FOXN4-201ENST00000299162 MYO19Q96H55 970 aa9.96□□□□□ -0.81
FOXN4-201ENST00000299162 KLF16Q9BXK1 252 aaPredicted RBP9.96□□□□□ -0.81
FOXN4-201ENST00000299162 NAA50Q9GZZ1 169 aaKnown RBP9.96□□□□□ -0.81
FOXN4-201ENST00000299162 MEAF6Q9HAF1 191 aa9.96□□□□□ -0.81
FOXN4-201ENST00000299162 MYRFQ9Y2G1 1151 aa9.96□□□□□ -0.81
FOXN4-201ENST00000299162 CARD8Q9Y2G2 431 aa9.96□□□□□ -0.81
FOXN4-201ENST00000299162 PRSS21Q9Y6M0 314 aa9.96□□□□□ -0.81
FOXN4-201ENST00000299162 SLC25A14O95258 325 aaPredicted RBP9.96□□□□□ -0.82
FOXN4-201ENST00000299162 LRG1P02750 347 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms