RNA–Protein interactions for RNA: ENST00000296302.11

PBRM1-201, Transcript of polybromo 1, humanhuman

TSL 1 (best) BASIC

Gene PBRM1, Length 5,145 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-201ENST00000296302 STON2Q8WXE9 905 aa10.9□□□□□ -0.66
PBRM1-201ENST00000296302 SLC38A4Q969I6 547 aa10.9□□□□□ -0.66
PBRM1-201ENST00000296302 NTPCRQ9BSD7 190 aaKnown RBP10.9□□□□□ -0.66
PBRM1-201ENST00000296302 C1QTNF7Q9BXJ2 289 aa10.9□□□□□ -0.66
PBRM1-201ENST00000296302 PDGFDQ9GZP0 370 aaPredicted RBP10.9□□□□□ -0.66
PBRM1-201ENST00000296302 C1orf109Q9NX04 203 aa10.9□□□□□ -0.66
PBRM1-201ENST00000296302 ACTR3BQ9P1U1 418 aa10.9□□□□□ -0.66
PBRM1-201ENST00000296302 FZD10Q9ULW2 581 aa10.9□□□□□ -0.66
PBRM1-201ENST00000296302 J3QRK9 145 aa10.9□□□□□ -0.66
PBRM1-201ENST00000296302 HERVK_113P63132 956 aa10.9□□□□□ -0.66
PBRM1-201ENST00000296302 TCEA2Q15560 299 aa10.9□□□□□ -0.66
PBRM1-201ENST00000296302 RPTNQ6XPR3 784 aa10.9□□□□□ -0.66
PBRM1-201ENST00000296302 CHST15Q7LFX5 561 aaPredicted RBP10.9□□□□□ -0.66
PBRM1-201ENST00000296302 FBXL8Q96CD0 374 aa10.9□□□□□ -0.66
PBRM1-201ENST00000296302 FEM1CQ96JP0 617 aa10.9□□□□□ -0.66
PBRM1-201ENST00000296302 ERVK-6Q9BXR3 956 aa10.9□□□□□ -0.66
PBRM1-201ENST00000296302 GLIS2Q9BZE0 524 aaPredicted RBP10.9□□□□□ -0.66
PBRM1-201ENST00000296302 HMGXB4Q9UGU5 601 aa10.9□□□□□ -0.66
PBRM1-201ENST00000296302 COL5A2P05997 1499 aaPredicted RBP10.9□□□□□ -0.66
PBRM1-201ENST00000296302 ZNF536O15090 1300 aa10.9□□□□□ -0.66
PBRM1-201ENST00000296302 URADA6NGE7 173 aa10.9□□□□□ -0.66
PBRM1-201ENST00000296302 CELF2O95319 508 aaKnown RBP10.9□□□□□ -0.66
PBRM1-201ENST00000296302 PABPC4LP0CB38 370 aaKnown RBP10.9□□□□□ -0.66
PBRM1-201ENST00000296302 MTHFD1P11586 935 aaKnown RBP10.9□□□□□ -0.66
PBRM1-201ENST00000296302 ATF4P18848 351 aaPredicted RBP10.9□□□□□ -0.66
PBRM1-201ENST00000296302 HSPA7P48741 367 aa10.9□□□□□ -0.66
PBRM1-201ENST00000296302 CRYBB1P53674 252 aaPredicted RBP10.9□□□□□ -0.66
PBRM1-201ENST00000296302 SMCO1Q147U7 214 aa10.9□□□□□ -0.66
PBRM1-201ENST00000296302 FAM174BQ3ZCQ3 159 aa10.9□□□□□ -0.66
PBRM1-201ENST00000296302 KLHL22Q53GT1 634 aa10.9□□□□□ -0.66
PBRM1-201ENST00000296302 PRR23CQ6ZRP0 262 aa10.9□□□□□ -0.66
PBRM1-201ENST00000296302 LDB1Q86U70 411 aaPredicted RBP10.9□□□□□ -0.66
PBRM1-201ENST00000296302 CENPSQ8N2Z9 138 aa10.9□□□□□ -0.66
PBRM1-201ENST00000296302 MPP5Q8N3R9 675 aa10.9□□□□□ -0.66
PBRM1-201ENST00000296302 GRIN3AQ8TCU5 1115 aa10.9□□□□□ -0.66
PBRM1-201ENST00000296302 MAF1Q9H063 256 aa10.9□□□□□ -0.66
PBRM1-201ENST00000296302 ZFYVE1Q9HBF4 777 aa10.9□□□□□ -0.66
PBRM1-201ENST00000296302 STARD7Q9NQZ5 370 aa10.9□□□□□ -0.66
PBRM1-201ENST00000296302 SNTG1Q9NSN8 517 aa10.9□□□□□ -0.66
PBRM1-201ENST00000296302 TESMINQ9Y4I5 508 aa10.9□□□□□ -0.66
PBRM1-201ENST00000296302 TCRBV7S3A2A0A539 114 aa10.9□□□□□ -0.67
PBRM1-201ENST00000296302 CXorf49A8MYA2 514 aaPredicted RBP10.9□□□□□ -0.67
PBRM1-201ENST00000296302 E9PAM4 449 aa10.9□□□□□ -0.67
PBRM1-201ENST00000296302 TSPAN4O14817 238 aa10.9□□□□□ -0.67
PBRM1-201ENST00000296302 ACOX3O15254 700 aa10.9□□□□□ -0.67
PBRM1-201ENST00000296302 GJB1P08034 283 aa10.9□□□□□ -0.67
PBRM1-201ENST00000296302 ANXA4P09525 319 aaPredicted RBP10.9□□□□□ -0.67
PBRM1-201ENST00000296302 DLDP09622 509 aaKnown RBP10.9□□□□□ -0.67
PBRM1-201ENST00000296302 ITPKAP23677 461 aa10.9□□□□□ -0.67
PBRM1-201ENST00000296302 FMO3P31513 532 aa10.9□□□□□ -0.67
PBRM1-201ENST00000296302 MRPS6P82932 125 aaKnown RBP10.9□□□□□ -0.67
PBRM1-201ENST00000296302 MBTD1Q05BQ5 628 aa10.9□□□□□ -0.67
PBRM1-201ENST00000296302 HNRNPDQ14103 355 aaKnown RBP10.9□□□□□ -0.67
PBRM1-201ENST00000296302 ZNF460Q14592 562 aa10.9□□□□□ -0.67
PBRM1-201ENST00000296302 TMEM44Q2T9K0 475 aa10.9□□□□□ -0.67
PBRM1-201ENST00000296302 ZNF773Q6PK81 442 aa10.9□□□□□ -0.67
PBRM1-201ENST00000296302 AGMOQ6ZNB7 445 aa10.9□□□□□ -0.67
PBRM1-201ENST00000296302 TPGS1Q6ZTW0 290 aa10.9□□□□□ -0.67
PBRM1-201ENST00000296302 PYROXD2Q8N2H3 581 aa10.9□□□□□ -0.67
PBRM1-201ENST00000296302 FAM98AQ8NCA5 519 aaKnown RBP10.9□□□□□ -0.67
PBRM1-201ENST00000296302 UFD1Q92890 307 aa10.9□□□□□ -0.67
PBRM1-201ENST00000296302 TEX264Q9Y6I9 313 aa10.9□□□□□ -0.67
PBRM1-201ENST00000296302 GLYATL1P3A0A0U1RQE8 302 aa10.89□□□□□ -0.67
PBRM1-201ENST00000296302 FAM25EA8MYX2 175 aa10.89□□□□□ -0.67
PBRM1-201ENST00000296302 TLR5O60602 858 aa10.89□□□□□ -0.67
PBRM1-201ENST00000296302 ESR1P03372 595 aa10.89□□□□□ -0.67
PBRM1-201ENST00000296302 SLC6A4P31645 630 aa10.89□□□□□ -0.67
PBRM1-201ENST00000296302 PBX3P40426 434 aa10.89□□□□□ -0.67
PBRM1-201ENST00000296302 SLC1A2P43004 574 aa10.89□□□□□ -0.67
PBRM1-201ENST00000296302 SLC15A1P46059 708 aa10.89□□□□□ -0.67
PBRM1-201ENST00000296302 GPR1P46091 355 aa10.89□□□□□ -0.67
PBRM1-201ENST00000296302 RPS14P62263 151 aaKnown RBP10.89□□□□□ -0.67
PBRM1-201ENST00000296302 IRF9Q00978 393 aa10.89□□□□□ -0.67
PBRM1-201ENST00000296302 TPRG1LQ5T0D9 272 aa10.89□□□□□ -0.67
PBRM1-201ENST00000296302 CXorf57Q6NSI4 855 aaKnown RBP10.89□□□□□ -0.67
PBRM1-201ENST00000296302 ZBTB26Q9HCK0 441 aa10.89□□□□□ -0.67
PBRM1-201ENST00000296302 MKLN1Q9UL63 735 aa10.89□□□□□ -0.67
PBRM1-201ENST00000296302 RPL36Q9Y3U8 105 aaKnown RBP10.89□□□□□ -0.67
PBRM1-201ENST00000296302 ZNF780BQ9Y6R6 833 aa10.89□□□□□ -0.67
PBRM1-201ENST00000296302 A0A0X1KG70 313 aa10.89□□□□□ -0.67
PBRM1-201ENST00000296302 OR14I1A6ND48 311 aa10.89□□□□□ -0.67
PBRM1-201ENST00000296302 TCEAL1Q15170 157 aa10.89□□□□□ -0.67
PBRM1-201ENST00000296302 IQCCQ4KMZ1 466 aa10.89□□□□□ -0.67
PBRM1-201ENST00000296302 CRTC2Q53ET0 693 aaPredicted RBP10.89□□□□□ -0.67
PBRM1-201ENST00000296302 DDX59Q5T1V6 619 aaKnown RBP eCLIP10.89□□□□□ -0.67
PBRM1-201ENST00000296302 FAM43BQ6ZT52 329 aaPredicted RBP10.89□□□□□ -0.67
PBRM1-201ENST00000296302 NCCRP1Q6ZVX7 275 aaPredicted RBP10.89□□□□□ -0.67
PBRM1-201ENST00000296302 SLC22A16Q86VW1 577 aa10.89□□□□□ -0.67
PBRM1-201ENST00000296302 TMEM209Q96SK2 561 aa10.89□□□□□ -0.67
PBRM1-201ENST00000296302 HNRNPABQ99729 332 aaKnown RBP10.89□□□□□ -0.67
PBRM1-201ENST00000296302 ITPAQ9BY32 194 aa10.89□□□□□ -0.67
PBRM1-201ENST00000296302 ZNF358Q9NW07 568 aa10.89□□□□□ -0.67
PBRM1-201ENST00000296302 EIF2B4Q9UI10 523 aaKnown RBP10.89□□□□□ -0.67
PBRM1-201ENST00000296302 TYROBPO43914 113 aa10.89□□□□□ -0.67
PBRM1-201ENST00000296302 GOT2P00505 430 aaKnown RBP10.89□□□□□ -0.67
PBRM1-201ENST00000296302 PNLIPRP1P54315 467 aa10.89□□□□□ -0.67
PBRM1-201ENST00000296302 DSC2Q02487 901 aa10.89□□□□□ -0.67
PBRM1-201ENST00000296302 KLHL24Q6TFL4 600 aa10.89□□□□□ -0.67
PBRM1-201ENST00000296302 DNAJB7Q7Z6W7 309 aaPredicted RBP10.89□□□□□ -0.67
PBRM1-201ENST00000296302 OR8H3Q8N146 312 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms