RNA–Protein interactions for RNA: ENST00000296271.3

RHO-201, Transcript of rhodopsin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHO, Length 2,592 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHO-201ENST00000296271 GTF2H2CQ6P1K8 395 aa11.6□□□□□ -0.55
RHO-201ENST00000296271 DDX53Q86TM3 631 aaKnown RBP11.6□□□□□ -0.55
RHO-201ENST00000296271 PCYOX1LQ8NBM8 494 aa11.6□□□□□ -0.55
RHO-201ENST00000296271 CLHC1Q8NHS4 586 aa11.6□□□□□ -0.55
RHO-201ENST00000296271 TMEM125Q96AQ2 219 aa11.6□□□□□ -0.55
RHO-201ENST00000296271 ERLEC1Q96DZ1 483 aa11.6□□□□□ -0.55
RHO-201ENST00000296271 PPM1MQ96MI6 270 aa11.6□□□□□ -0.55
RHO-201ENST00000296271 TSC22D3Q99576 134 aa11.6□□□□□ -0.55
RHO-201ENST00000296271 EGFL8Q99944 293 aa11.6□□□□□ -0.55
RHO-201ENST00000296271 TMEM79Q9BSE2 394 aa11.6□□□□□ -0.55
RHO-201ENST00000296271 CRLS1Q9UJA2 301 aa11.6□□□□□ -0.55
RHO-201ENST00000296271 RNF11Q9Y3C5 154 aa11.6□□□□□ -0.55
RHO-201ENST00000296271 POLR3HQ9Y535 204 aaPredicted RBP11.6□□□□□ -0.55
RHO-201ENST00000296271 PCDHA9Q9Y5H5 950 aa11.6□□□□□ -0.55
RHO-201ENST00000296271 TYW5A2RUC4 315 aaKnown RBP11.59□□□□□ -0.55
RHO-201ENST00000296271 ARPC2O15144 300 aa11.59□□□□□ -0.55
RHO-201ENST00000296271 HTRA2O43464 458 aaPredicted RBP11.59□□□□□ -0.55
RHO-201ENST00000296271 SLC22A3O75751 556 aa11.59□□□□□ -0.55
RHO-201ENST00000296271 UGT2B4P06133 528 aa11.59□□□□□ -0.55
RHO-201ENST00000296271 C8AP07357 584 aa11.59□□□□□ -0.55
RHO-201ENST00000296271 IDO1P14902 403 aa11.59□□□□□ -0.55
RHO-201ENST00000296271 WEE1P30291 646 aa11.59□□□□□ -0.55
RHO-201ENST00000296271 GSK3BP49841 420 aa11.59□□□□□ -0.55
RHO-201ENST00000296271 MTPNP58546 118 aa11.59□□□□□ -0.55
RHO-201ENST00000296271 TRAF3Q13114 568 aa11.59□□□□□ -0.55
RHO-201ENST00000296271 GRM2Q14416 872 aa11.59□□□□□ -0.55
RHO-201ENST00000296271 VRK3Q8IV63 474 aa11.59□□□□□ -0.55
RHO-201ENST00000296271 SLC22A15Q8IZD6 547 aa11.59□□□□□ -0.55
RHO-201ENST00000296271 METTL25Q8N6Q8 603 aa11.59□□□□□ -0.55
RHO-201ENST00000296271 ZNF366Q8N895 744 aa11.59□□□□□ -0.55
RHO-201ENST00000296271 NAT16Q8N8M0 369 aa11.59□□□□□ -0.55
RHO-201ENST00000296271 ADCY4Q8NFM4 1077 aa11.59□□□□□ -0.55
RHO-201ENST00000296271 SPDYE1Q8NFV5 336 aaPredicted RBP11.59□□□□□ -0.55
RHO-201ENST00000296271 MRPS31Q92665 395 aaKnown RBP11.59□□□□□ -0.55
RHO-201ENST00000296271 FOXJ1Q92949 421 aa11.59□□□□□ -0.55
RHO-201ENST00000296271 BTBD9Q96Q07 612 aa11.59□□□□□ -0.55
RHO-201ENST00000296271 PRPF18Q99633 342 aaKnown RBP11.59□□□□□ -0.55
RHO-201ENST00000296271 C1QTNF3Q9BXJ4 246 aa11.59□□□□□ -0.55
RHO-201ENST00000296271 ZDHHC6Q9H6R6 413 aa11.59□□□□□ -0.55
RHO-201ENST00000296271 ZFP14Q9HCL3 533 aa11.59□□□□□ -0.55
RHO-201ENST00000296271 PDP2Q9P2J9 529 aa11.59□□□□□ -0.55
RHO-201ENST00000296271 ABCD2Q9UBJ2 740 aa11.59□□□□□ -0.55
RHO-201ENST00000296271 NOTCH4Q99466 2003 aa11.59□□□□□ -0.55
RHO-201ENST00000296271 A0A1W2PP18 115 aa11.59□□□□□ -0.55
RHO-201ENST00000296271 DENRO43583 198 aaKnown RBP11.59□□□□□ -0.55
RHO-201ENST00000296271 MATN4O95460 622 aa11.59□□□□□ -0.55
RHO-201ENST00000296271 CLIC3O95833 236 aa11.59□□□□□ -0.55
RHO-201ENST00000296271 GNAO1P09471 354 aa11.59□□□□□ -0.55
RHO-201ENST00000296271 ACRV1P26436 265 aa11.59□□□□□ -0.55
RHO-201ENST00000296271 POLR2JP52435 117 aaKnown RBP11.59□□□□□ -0.55
RHO-201ENST00000296271 KCNK10P57789 538 aa11.59□□□□□ -0.55
RHO-201ENST00000296271 AP1S1P61966 158 aa11.59□□□□□ -0.55
RHO-201ENST00000296271 NTHL1P78549 312 aa11.59□□□□□ -0.55
RHO-201ENST00000296271 PTSQ03393 145 aa11.59□□□□□ -0.55
RHO-201ENST00000296271 RCAN2Q14206 197 aa11.59□□□□□ -0.55
RHO-201ENST00000296271 NR6A1Q15406 480 aa11.59□□□□□ -0.55
RHO-201ENST00000296271 LIN52Q52LA3 116 aa11.59□□□□□ -0.55
RHO-201ENST00000296271 PYCR3Q53H96 274 aa11.59□□□□□ -0.55
RHO-201ENST00000296271 RETSATQ6NUM9 610 aa11.59□□□□□ -0.55
RHO-201ENST00000296271 SERPINA13PQ6UXR4 307 aa11.59□□□□□ -0.55
RHO-201ENST00000296271 DPY19L3Q6ZPD9 716 aa11.59□□□□□ -0.55
RHO-201ENST00000296271 Q6ZVU0 165 aa11.59□□□□□ -0.55
RHO-201ENST00000296271 SNX20Q7Z614 316 aa11.59□□□□□ -0.55
RHO-201ENST00000296271 RNF175Q8N4F7 328 aa11.59□□□□□ -0.55
RHO-201ENST00000296271 MARVELD2Q8N4S9 558 aa11.59□□□□□ -0.55
RHO-201ENST00000296271 OR2T34Q8NGX1 318 aa11.59□□□□□ -0.55
RHO-201ENST00000296271 OR2T3Q8NH03 318 aa11.59□□□□□ -0.55
RHO-201ENST00000296271 PYCR2Q96C36 320 aa11.59□□□□□ -0.55
RHO-201ENST00000296271 CEP295NLQ96MC4 621 aa11.59□□□□□ -0.55
RHO-201ENST00000296271 SOX17Q9H6I2 414 aaPredicted RBP11.59□□□□□ -0.55
RHO-201ENST00000296271 LATS2Q9NRM7 1088 aa11.59□□□□□ -0.55
RHO-201ENST00000296271 HACD3Q9P035 362 aa11.59□□□□□ -0.55
RHO-201ENST00000296271 TMPRSS11EQ9UL52 423 aa11.59□□□□□ -0.55
RHO-201ENST00000296271 LZTS1Q9Y250 596 aa11.59□□□□□ -0.55
RHO-201ENST00000296271 ST14Q9Y5Y6 855 aa11.59□□□□□ -0.55
RHO-201ENST00000296271 DENND4CQ5VZ89 1909 aa11.58□□□□□ -0.56
RHO-201ENST00000296271 CCDC154A6NI56 674 aa11.58□□□□□ -0.56
RHO-201ENST00000296271 NEDD8-MDP1E9PL57 170 aa11.58□□□□□ -0.56
RHO-201ENST00000296271 GIPC1O14908 333 aa11.58□□□□□ -0.56
RHO-201ENST00000296271 INPP4BO15327 924 aa11.58□□□□□ -0.56
RHO-201ENST00000296271 MLYCDO95822 493 aa11.58□□□□□ -0.56
RHO-201ENST00000296271 C1QCP02747 245 aa11.58□□□□□ -0.56
RHO-201ENST00000296271 ZNF7P17097 686 aaPredicted RBP11.58□□□□□ -0.56
RHO-201ENST00000296271 SLC7A1P30825 629 aa11.58□□□□□ -0.56
RHO-201ENST00000296271 OR4D2P58180 307 aa11.58□□□□□ -0.56
RHO-201ENST00000296271 ERVFC1P60507 584 aa11.58□□□□□ -0.56
RHO-201ENST00000296271 PRKCQQ04759 706 aa11.58□□□□□ -0.56
RHO-201ENST00000296271 LIPEQ05469 1076 aa11.58□□□□□ -0.56
RHO-201ENST00000296271 CNPY1Q3B7I2 92 aa11.58□□□□□ -0.56
RHO-201ENST00000296271 AARS2Q5JTZ9 985 aaKnown RBP11.58□□□□□ -0.56
RHO-201ENST00000296271 TBCELQ5QJ74 424 aa11.58□□□□□ -0.56
RHO-201ENST00000296271 NANOGP8Q6NSW7 305 aa11.58□□□□□ -0.56
RHO-201ENST00000296271 HACD2Q6Y1H2 254 aa11.58□□□□□ -0.56
RHO-201ENST00000296271 DNAJC14Q6Y2X3 702 aaPredicted RBP11.58□□□□□ -0.56
RHO-201ENST00000296271 EPHX4Q8IUS5 362 aa11.58□□□□□ -0.56
RHO-201ENST00000296271 KLHL23Q8NBE8 558 aa11.58□□□□□ -0.56
RHO-201ENST00000296271 SCAMP4Q969E2 229 aa11.58□□□□□ -0.56
RHO-201ENST00000296271 ROPN1LQ96C74 230 aa11.58□□□□□ -0.56
RHO-201ENST00000296271 ZNF382Q96SR6 550 aa11.58□□□□□ -0.56
RHO-201ENST00000296271 NANOGQ9H9S0 305 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms