RNA–Protein interactions for RNA: ENST00000288022.1

PDF-201, Transcript of peptide deformylase, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDF, Length 1,158 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDF-201ENST00000288022 PPARGP37231 505 aaPredicted RBP24.63■■□□□ 1.53
PDF-201ENST00000288022 EIF3IQ13347 325 aaKnown RBP24.63■■□□□ 1.53
PDF-201ENST00000288022 SQSTM1Q13501 440 aa24.63■■□□□ 1.53
PDF-201ENST00000288022 RPE65Q16518 533 aa24.63■■□□□ 1.53
PDF-201ENST00000288022 AARS2Q5JTZ9 985 aaKnown RBP24.63■■□□□ 1.53
PDF-201ENST00000288022 CES3Q6UWW8 571 aa24.63■■□□□ 1.53
PDF-201ENST00000288022 CERS6Q6ZMG9 384 aa24.63■■□□□ 1.53
PDF-201ENST00000288022 PPIL6Q8IXY8 311 aa24.63■■□□□ 1.53
PDF-201ENST00000288022 FBXO39Q8N4B4 442 aa24.63■■□□□ 1.53
PDF-201ENST00000288022 MCUQ8NE86 351 aa24.63■■□□□ 1.53
PDF-201ENST00000288022 OR4D9Q8NGE8 314 aa24.63■■□□□ 1.53
PDF-201ENST00000288022 NCSTNQ92542 709 aa24.63■■□□□ 1.53
PDF-201ENST00000288022 CCDC74BQ96LY2 380 aa24.63■■□□□ 1.53
PDF-201ENST00000288022 KIFC1Q9BW19 673 aa24.63■■□□□ 1.53
PDF-201ENST00000288022 UCK1Q9HA47 277 aa24.63■■□□□ 1.53
PDF-201ENST00000288022 MRM3Q9HC36 420 aaKnown RBP24.63■■□□□ 1.53
PDF-201ENST00000288022 XAB2Q9HCS7 855 aaKnown RBP24.63■■□□□ 1.53
PDF-201ENST00000288022 SLC40A1Q9NP59 571 aa24.63■■□□□ 1.53
PDF-201ENST00000288022 TREX1Q9NSU2 369 aa24.63■■□□□ 1.53
PDF-201ENST00000288022 PCYOX1Q9UHG3 505 aa24.63■■□□□ 1.53
PDF-201ENST00000288022 RAXQ9Y2V3 346 aa24.63■■□□□ 1.53
PDF-201ENST00000288022 UNC13CQ8NB66 2214 aa24.62■■□□□ 1.53
PDF-201ENST00000288022 PRAMEF33A0A0G2JMD5 474 aa24.62■■□□□ 1.53
PDF-201ENST00000288022 IGHV5-10-1A0A0J9YXX1 117 aa24.62■■□□□ 1.53
PDF-201ENST00000288022 MLNP12872 115 aa24.62■■□□□ 1.53
PDF-201ENST00000288022 HOXB3P14651 431 aaPredicted RBP24.62■■□□□ 1.53
PDF-201ENST00000288022 PTK6Q13882 451 aa24.62■■□□□ 1.53
PDF-201ENST00000288022 PACS1Q6VY07 963 aa24.62■■□□□ 1.53
PDF-201ENST00000288022 ZNF574Q6ZN55 896 aaPredicted RBP24.62■■□□□ 1.53
PDF-201ENST00000288022 CAND1Q86VP6 1230 aaKnown RBP24.62■■□□□ 1.53
PDF-201ENST00000288022 RBM12BQ8IXT5 1001 aaKnown RBP24.62■■□□□ 1.53
PDF-201ENST00000288022 MPP5Q8N3R9 675 aa24.62■■□□□ 1.53
PDF-201ENST00000288022 LILRA3Q8N6C8 439 aaPredicted RBP24.62■■□□□ 1.53
PDF-201ENST00000288022 OTUD6BQ8N6M0 293 aa24.62■■□□□ 1.53
PDF-201ENST00000288022 SLCO2A1Q92959 643 aa24.62■■□□□ 1.53
PDF-201ENST00000288022 MFSD3Q96ES6 412 aa24.62■■□□□ 1.53
PDF-201ENST00000288022 SGSM3Q96HU1 749 aa24.62■■□□□ 1.53
PDF-201ENST00000288022 C12orf66Q96MD2 445 aa24.62■■□□□ 1.53
PDF-201ENST00000288022 RUNDC3BQ96NL0 473 aa24.62■■□□□ 1.53
PDF-201ENST00000288022 AKAP7Q9P0M2 348 aaPredicted RBP24.62■■□□□ 1.53
PDF-201ENST00000288022 TMEM9Q9P0T7 183 aa24.62■■□□□ 1.53
PDF-201ENST00000288022 RNF14Q9UBS8 474 aa24.62■■□□□ 1.53
PDF-201ENST00000288022 SOX13Q9UN79 622 aa24.62■■□□□ 1.53
PDF-201ENST00000288022 LOXL2Q9Y4K0 774 aa24.62■■□□□ 1.53
PDF-201ENST00000288022 PCDHGA8Q9Y5G5 932 aa24.62■■□□□ 1.53
PDF-201ENST00000288022 CFAP20Q9Y6A4 193 aaKnown RBP24.62■■□□□ 1.53
PDF-201ENST00000288022 PRSS21Q9Y6M0 314 aa24.62■■□□□ 1.53
PDF-201ENST00000288022 MAP1BP46821 2468 aaKnown RBP24.61■■□□□ 1.53
PDF-201ENST00000288022 C17orf113A0A1B0GUU1 675 aa24.61■■□□□ 1.53
PDF-201ENST00000288022 SRRM3A6NNA2 597 aaPredicted RBP24.61■■□□□ 1.53
PDF-201ENST00000288022 QSOX1O00391 747 aa24.61■■□□□ 1.53
PDF-201ENST00000288022 PLD2O14939 933 aa24.61■■□□□ 1.53
PDF-201ENST00000288022 CD3EAPO15446 510 aaKnown RBP24.61■■□□□ 1.53
PDF-201ENST00000288022 OR1I1O60431 355 aa24.61■■□□□ 1.53
PDF-201ENST00000288022 JMJD7P0C870 316 aa24.61■■□□□ 1.53
PDF-201ENST00000288022 LIMK2P53671 638 aa24.61■■□□□ 1.53
PDF-201ENST00000288022 CFHR1Q03591 330 aa24.61■■□□□ 1.53
PDF-201ENST00000288022 GPR18Q14330 331 aa24.61■■□□□ 1.53
PDF-201ENST00000288022 SEMA3AQ14563 771 aa24.61■■□□□ 1.53
PDF-201ENST00000288022 TBC1D25Q3MII6 688 aa24.61■■□□□ 1.53
PDF-201ENST00000288022 TMEM71Q6P5X7 295 aa24.61■■□□□ 1.53
PDF-201ENST00000288022 ZNF449Q6P9G9 518 aa24.61■■□□□ 1.53
PDF-201ENST00000288022 LDB1Q86U70 411 aaPredicted RBP24.61■■□□□ 1.53
PDF-201ENST00000288022 RCBTB1Q8NDN9 531 aa24.61■■□□□ 1.53
PDF-201ENST00000288022 SERPINB12Q96P63 405 aa24.61■■□□□ 1.53
PDF-201ENST00000288022 CMKLR1Q99788 373 aa24.61■■□□□ 1.53
PDF-201ENST00000288022 EPB41L1Q9H4G0 881 aa24.61■■□□□ 1.53
PDF-201ENST00000288022 COG4Q9H9E3 785 aa24.61■■□□□ 1.53
PDF-201ENST00000288022 SDR42E2A6NKP2 422 aa24.6■■□□□ 1.53
PDF-201ENST00000288022 F8W8V4 182 aa24.6■■□□□ 1.53
PDF-201ENST00000288022 CCDC188H7C350 402 aa24.6■■□□□ 1.53
PDF-201ENST00000288022 TNFSF15O95150 251 aa24.6■■□□□ 1.53
PDF-201ENST00000288022 VAPBO95292 243 aa24.6■■□□□ 1.53
PDF-201ENST00000288022 FTH1P02794 183 aa24.6■■□□□ 1.53
PDF-201ENST00000288022 OR56A5P0C7T3 313 aa24.6■■□□□ 1.53
PDF-201ENST00000288022 MTHFD1P11586 935 aaKnown RBP24.6■■□□□ 1.53
PDF-201ENST00000288022 HGFP14210 728 aa24.6■■□□□ 1.53
PDF-201ENST00000288022 TYRP1P17643 537 aa24.6■■□□□ 1.53
PDF-201ENST00000288022 AMD1P17707 334 aa24.6■■□□□ 1.53
PDF-201ENST00000288022 PTGIRP43119 386 aa24.6■■□□□ 1.53
PDF-201ENST00000288022 ETF1P62495 437 aaKnown RBP24.6■■□□□ 1.53
PDF-201ENST00000288022 DR1Q01658 176 aa24.6■■□□□ 1.53
PDF-201ENST00000288022 SNAP47Q5SQN1 464 aa24.6■■□□□ 1.53
PDF-201ENST00000288022 SYT10Q6XYQ8 523 aa24.6■■□□□ 1.53
PDF-201ENST00000288022 NAT8LQ8N9F0 302 aa24.6■■□□□ 1.53
PDF-201ENST00000288022 SPDYE1Q8NFV5 336 aaPredicted RBP24.6■■□□□ 1.53
PDF-201ENST00000288022 GPR150Q8NGU9 434 aa24.6■■□□□ 1.53
PDF-201ENST00000288022 TMEM159Q96B96 161 aa24.6■■□□□ 1.53
PDF-201ENST00000288022 INSM2Q96T92 566 aaPredicted RBP24.6■■□□□ 1.53
PDF-201ENST00000288022 THSD1Q9NS62 852 aa24.6■■□□□ 1.53
PDF-201ENST00000288022 MARCH4Q9P2E8 410 aaPredicted RBP24.6■■□□□ 1.53
PDF-201ENST00000288022 PISDQ9UG56 409 aa24.6■■□□□ 1.53
PDF-201ENST00000288022 IGF2RP11717 2491 aa24.6■■□□□ 1.53
PDF-201ENST00000288022 DXOO77932 396 aaKnown RBP24.59■■□□□ 1.53
PDF-201ENST00000288022 UBXN7O94888 489 aa24.59■■□□□ 1.53
PDF-201ENST00000288022 GSTM1P09488 218 aa24.59■■□□□ 1.53
PDF-201ENST00000288022 GSTM4Q03013 218 aa24.59■■□□□ 1.53
PDF-201ENST00000288022 TRA2AQ13595 282 aaKnown RBP eCLIP24.59■■□□□ 1.53
PDF-201ENST00000288022 KRT33BQ14525 404 aa24.59■■□□□ 1.53
PDF-201ENST00000288022 C16orf72Q14CZ0 275 aa24.59■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms