RNA–Protein interactions for RNA: ENST00000287936.8

HMGCR-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA reductase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCR, Length 4,585 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCR-201ENST00000287936 MTHFRP42898 656 aa9.91□□□□□ -0.82
HMGCR-201ENST00000287936 AGTR2P50052 363 aa9.91□□□□□ -0.82
HMGCR-201ENST00000287936 CDKL1Q00532 357 aa9.91□□□□□ -0.82
HMGCR-201ENST00000287936 MYLK3Q32MK0 819 aa9.91□□□□□ -0.82
HMGCR-201ENST00000287936 RABL3Q5HYI8 236 aa9.91□□□□□ -0.82
HMGCR-201ENST00000287936 GCNT7Q6ZNI0 430 aa9.91□□□□□ -0.82
HMGCR-201ENST00000287936 GOLGA7Q7Z5G4 137 aa9.91□□□□□ -0.82
HMGCR-201ENST00000287936 THAP5Q7Z6K1 395 aa9.91□□□□□ -0.82
HMGCR-201ENST00000287936 DEFB128Q7Z7B8 93 aa9.91□□□□□ -0.82
HMGCR-201ENST00000287936 PATL1Q86TB9 770 aaKnown RBP9.91□□□□□ -0.82
HMGCR-201ENST00000287936 TMEM151AQ8N4L1 468 aa9.91□□□□□ -0.82
HMGCR-201ENST00000287936 ZNF557Q8N988 423 aaPredicted RBP9.91□□□□□ -0.82
HMGCR-201ENST00000287936 ANKRD60Q9BZ19 345 aa9.91□□□□□ -0.82
HMGCR-201ENST00000287936 FAM8A1Q9UBU6 413 aa9.91□□□□□ -0.82
HMGCR-201ENST00000287936 SPO11Q9Y5K1 396 aa9.91□□□□□ -0.82
HMGCR-201ENST00000287936 OTOFQ9HC10 1997 aa9.91□□□□□ -0.82
HMGCR-201ENST00000287936 H3BSA7 217 aa9.9□□□□□ -0.82
HMGCR-201ENST00000287936 K7EPI3 171 aa9.9□□□□□ -0.82
HMGCR-201ENST00000287936 PDLIM1O00151 329 aa9.9□□□□□ -0.82
HMGCR-201ENST00000287936 PQBP1O60828 265 aaKnown RBP9.9□□□□□ -0.82
HMGCR-201ENST00000287936 BMP10O95393 424 aa9.9□□□□□ -0.82
HMGCR-201ENST00000287936 PARNO95453 639 aaKnown RBP9.9□□□□□ -0.82
HMGCR-201ENST00000287936 CLDN9O95484 217 aa9.9□□□□□ -0.82
HMGCR-201ENST00000287936 MYCP01106 439 aaPredicted RBP9.9□□□□□ -0.82
HMGCR-201ENST00000287936 MMP2P08253 660 aa9.9□□□□□ -0.82
HMGCR-201ENST00000287936 ECT2LQ008S8 904 aa9.9□□□□□ -0.82
HMGCR-201ENST00000287936 C16orf72Q14CZ0 275 aa9.9□□□□□ -0.82
HMGCR-201ENST00000287936 ATP6AP1Q15904 470 aa9.9□□□□□ -0.82
HMGCR-201ENST00000287936 MPPE1Q53F39 396 aa9.9□□□□□ -0.82
HMGCR-201ENST00000287936 BORAQ6PGQ7 559 aa9.9□□□□□ -0.82
HMGCR-201ENST00000287936 SPESP1Q6UW49 350 aa9.9□□□□□ -0.82
HMGCR-201ENST00000287936 FAM81AQ8TBF8 368 aa9.9□□□□□ -0.82
HMGCR-201ENST00000287936 MYRFLQ96LU7 910 aa9.9□□□□□ -0.82
HMGCR-201ENST00000287936 C3orf30Q96M34 536 aa9.9□□□□□ -0.82
HMGCR-201ENST00000287936 GKN1Q9NS71 199 aa9.9□□□□□ -0.82
HMGCR-201ENST00000287936 LRRC37A2A6NM11 1700 aa9.9□□□□□ -0.82
HMGCR-201ENST00000287936 RASAL1O95294 804 aa9.9□□□□□ -0.82
HMGCR-201ENST00000287936 ALDOCP09972 364 aaKnown RBP9.9□□□□□ -0.82
HMGCR-201ENST00000287936 PCNAP12004 261 aa9.9□□□□□ -0.82
HMGCR-201ENST00000287936 SLC6A2P23975 617 aa9.9□□□□□ -0.82
HMGCR-201ENST00000287936 SUOXP51687 545 aa9.9□□□□□ -0.82
HMGCR-201ENST00000287936 BOP1Q14137 746 aaKnown RBP9.9□□□□□ -0.82
HMGCR-201ENST00000287936 ZNF284Q2VY69 593 aa9.9□□□□□ -0.82
HMGCR-201ENST00000287936 INO80DQ53TQ3 878 aaPredicted RBP9.9□□□□□ -0.82
HMGCR-201ENST00000287936 FAM117BQ6P1L5 589 aa9.9□□□□□ -0.82
HMGCR-201ENST00000287936 LYSMD3Q7Z3D4 306 aa9.9□□□□□ -0.82
HMGCR-201ENST00000287936 OR4F6Q8NGB9 312 aa9.9□□□□□ -0.82
HMGCR-201ENST00000287936 NELL1Q92832 810 aa9.9□□□□□ -0.82
HMGCR-201ENST00000287936 TRIB3Q96RU7 358 aa9.9□□□□□ -0.82
HMGCR-201ENST00000287936 RBM4BQ9BQ04 359 aaKnown RBP9.9□□□□□ -0.82
HMGCR-201ENST00000287936 RBM4Q9BWF3 364 aaKnown RBP9.9□□□□□ -0.82
HMGCR-201ENST00000287936 RAD18Q9NS91 495 aa9.9□□□□□ -0.82
HMGCR-201ENST00000287936 M0R3G1 203 aa9.9□□□□□ -0.82
HMGCR-201ENST00000287936 PRPS2P11908 318 aa9.9□□□□□ -0.82
HMGCR-201ENST00000287936 DDX5P17844 614 aaKnown RBP9.9□□□□□ -0.82
HMGCR-201ENST00000287936 RPL17P18621 184 aaKnown RBP9.9□□□□□ -0.82
HMGCR-201ENST00000287936 DPP6P42658 865 aa9.9□□□□□ -0.82
HMGCR-201ENST00000287936 IL5RAQ01344 420 aa9.9□□□□□ -0.82
HMGCR-201ENST00000287936 CREMQ03060 361 aa9.9□□□□□ -0.82
HMGCR-201ENST00000287936 CYP4F3Q08477 520 aa9.9□□□□□ -0.82
HMGCR-201ENST00000287936 NOGQ13253 232 aa9.9□□□□□ -0.82
HMGCR-201ENST00000287936 DAG1Q14118 895 aa9.9□□□□□ -0.82
HMGCR-201ENST00000287936 ATXN7L2Q5T6C5 722 aaPredicted RBP9.9□□□□□ -0.82
HMGCR-201ENST00000287936 GPR107Q5VW38 600 aa9.9□□□□□ -0.82
HMGCR-201ENST00000287936 NANOGP8Q6NSW7 305 aa9.9□□□□□ -0.82
HMGCR-201ENST00000287936 PSAPL1Q6NUJ1 521 aa9.9□□□□□ -0.82
HMGCR-201ENST00000287936 TTC23LQ6PF05 361 aa9.9□□□□□ -0.82
HMGCR-201ENST00000287936 GPR180Q86V85 440 aa9.9□□□□□ -0.82
HMGCR-201ENST00000287936 PNPLA1Q8N8W4 532 aa9.9□□□□□ -0.82
HMGCR-201ENST00000287936 ACDQ96AP0 544 aa9.9□□□□□ -0.82
HMGCR-201ENST00000287936 BIRC7Q96CA5 298 aa9.9□□□□□ -0.82
HMGCR-201ENST00000287936 CDK15Q96Q40 435 aa9.9□□□□□ -0.82
HMGCR-201ENST00000287936 NANOGQ9H9S0 305 aa9.9□□□□□ -0.82
HMGCR-201ENST00000287936 CXorf21Q9HAI6 301 aa9.9□□□□□ -0.82
HMGCR-201ENST00000287936 MAGEE1Q9HCI5 957 aa9.9□□□□□ -0.82
HMGCR-201ENST00000287936 C1orf109Q9NX04 203 aa9.9□□□□□ -0.82
HMGCR-201ENST00000287936 CMTM6Q9NX76 183 aa9.9□□□□□ -0.82
HMGCR-201ENST00000287936 UBAP1Q9NZ09 502 aa9.9□□□□□ -0.82
HMGCR-201ENST00000287936 DNAJB9Q9UBS3 223 aa9.9□□□□□ -0.82
HMGCR-201ENST00000287936 CD300AQ9UGN4 299 aa9.9□□□□□ -0.82
HMGCR-201ENST00000287936 RPS6KA6Q9UK32 745 aa9.9□□□□□ -0.82
HMGCR-201ENST00000287936 TPRKBQ9Y3C4 175 aa9.9□□□□□ -0.82
HMGCR-201ENST00000287936 NUP205Q92621 2012 aa9.9□□□□□ -0.82
HMGCR-201ENST00000287936 COCHO43405 550 aa9.9□□□□□ -0.83
HMGCR-201ENST00000287936 EPN2O95208 641 aa9.9□□□□□ -0.83
HMGCR-201ENST00000287936 GALTP07902 379 aa9.9□□□□□ -0.83
HMGCR-201ENST00000287936 RXRGP48443 463 aa9.9□□□□□ -0.83
HMGCR-201ENST00000287936 MTPNP58546 118 aa9.9□□□□□ -0.83
HMGCR-201ENST00000287936 TRIM32Q13049 653 aa9.9□□□□□ -0.83
HMGCR-201ENST00000287936 CPSF6Q16630 551 aaKnown RBP eCLIP9.9□□□□□ -0.83
HMGCR-201ENST00000287936 SLC2A7Q6PXP3 512 aa9.9□□□□□ -0.83
HMGCR-201ENST00000287936 SYT12Q8IV01 421 aa9.9□□□□□ -0.83
HMGCR-201ENST00000287936 CHERPQ8IWX8 916 aaKnown RBP9.9□□□□□ -0.83
HMGCR-201ENST00000287936 DCAF4L2Q8NA75 395 aa9.9□□□□□ -0.83
HMGCR-201ENST00000287936 OR6K2Q8NGY2 324 aa9.9□□□□□ -0.83
HMGCR-201ENST00000287936 SLC29A3Q9BZD2 475 aa9.9□□□□□ -0.83
HMGCR-201ENST00000287936 CIDEBQ9UHD4 219 aa9.9□□□□□ -0.83
HMGCR-201ENST00000287936 YIPF1Q9Y548 306 aa9.9□□□□□ -0.83
HMGCR-201ENST00000287936 SHROOM3Q8TF72 1996 aa9.9□□□□□ -0.83
HMGCR-201ENST00000287936 TRAV19A0A0A6YYK7 116 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms