RNA–Protein interactions for RNA: ENST00000283131.3

SMARCA5-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCA5, Length 7,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5-201ENST00000283131 EGFLAMQ63HQ2 1017 aa13.08□□□□□ -0.32
SMARCA5-201ENST00000283131 NXNL1Q96CM4 212 aa13.08□□□□□ -0.32
SMARCA5-201ENST00000283131 TREX2Q9BQ50 279 aaPredicted RBP13.08□□□□□ -0.32
SMARCA5-201ENST00000283131 POLR3BQ9NW08 1133 aaPredicted RBP13.08□□□□□ -0.32
SMARCA5-201ENST00000283131 KIAA1522Q9P206 1035 aaPredicted RBP13.08□□□□□ -0.32
SMARCA5-201ENST00000283131 HDAC3O15379 428 aa13.07□□□□□ -0.32
SMARCA5-201ENST00000283131 ABCG1P45844 678 aa13.07□□□□□ -0.32
SMARCA5-201ENST00000283131 RORCP51449 518 aa13.07□□□□□ -0.32
SMARCA5-201ENST00000283131 ERVK-21P61565 698 aa13.07□□□□□ -0.32
SMARCA5-201ENST00000283131 EML3Q32P44 896 aa13.07□□□□□ -0.32
SMARCA5-201ENST00000283131 INTS6LQ5JSJ4 861 aaKnown RBP13.07□□□□□ -0.32
SMARCA5-201ENST00000283131 PAMR1Q6UXH9 720 aa13.07□□□□□ -0.32
SMARCA5-201ENST00000283131 NAT16Q8N8M0 369 aa13.07□□□□□ -0.32
SMARCA5-201ENST00000283131 CENPMQ9NSP4 180 aa13.07□□□□□ -0.32
SMARCA5-201ENST00000283131 NOP16Q9Y3C1 178 aaKnown RBP13.07□□□□□ -0.32
SMARCA5-201ENST00000283131 KCNJ13O60928 360 aa13.07□□□□□ -0.32
SMARCA5-201ENST00000283131 GABBR2O75899 941 aa13.07□□□□□ -0.32
SMARCA5-201ENST00000283131 BNIP3Q12983 259 aa13.07□□□□□ -0.32
SMARCA5-201ENST00000283131 SNTA1Q13424 505 aa13.07□□□□□ -0.32
SMARCA5-201ENST00000283131 ARSHQ5FYA8 562 aa13.07□□□□□ -0.32
SMARCA5-201ENST00000283131 GALNT11Q8NCW6 608 aa13.07□□□□□ -0.32
SMARCA5-201ENST00000283131 GORASP1Q9BQQ3 440 aa13.07□□□□□ -0.32
SMARCA5-201ENST00000283131 ZDHHC4Q9NPG8 344 aa13.07□□□□□ -0.32
SMARCA5-201ENST00000283131 FARSBQ9NSD9 589 aaKnown RBP13.07□□□□□ -0.32
SMARCA5-201ENST00000283131 DUSP10Q9Y6W6 482 aa13.07□□□□□ -0.32
SMARCA5-201ENST00000283131 DAPL1A0PJW8 107 aa13.07□□□□□ -0.32
SMARCA5-201ENST00000283131 FAM86B1E9PN63 330 aa13.07□□□□□ -0.32
SMARCA5-201ENST00000283131 TLL1O43897 1013 aa13.07□□□□□ -0.32
SMARCA5-201ENST00000283131 ANXA3P12429 323 aa13.07□□□□□ -0.32
SMARCA5-201ENST00000283131 CRADDP78560 199 aa13.07□□□□□ -0.32
SMARCA5-201ENST00000283131 VASH1Q7L8A9 365 aaPredicted RBP13.07□□□□□ -0.32
SMARCA5-201ENST00000283131 FAM47BQ8NA70 645 aa13.07□□□□□ -0.32
SMARCA5-201ENST00000283131 IGDCC4Q8TDY8 1250 aa13.07□□□□□ -0.32
SMARCA5-201ENST00000283131 TBL1XR1Q9BZK7 514 aa13.07□□□□□ -0.32
SMARCA5-201ENST00000283131 MUC13Q9H3R2 512 aa13.07□□□□□ -0.32
SMARCA5-201ENST00000283131 FADS3Q9Y5Q0 445 aa13.07□□□□□ -0.32
SMARCA5-201ENST00000283131 SERPINA6P08185 405 aa13.07□□□□□ -0.32
SMARCA5-201ENST00000283131 LTKP29376 864 aa13.07□□□□□ -0.32
SMARCA5-201ENST00000283131 AARDQ4LEZ3 155 aa13.07□□□□□ -0.32
SMARCA5-201ENST00000283131 ZC3H12AQ5D1E8 599 aaKnown RBP13.07□□□□□ -0.32
SMARCA5-201ENST00000283131 TMPRSS4Q9NRS4 437 aa13.07□□□□□ -0.32
SMARCA5-201ENST00000283131 AGO1Q9UL18 857 aaKnown RBP13.07□□□□□ -0.32
SMARCA5-201ENST00000283131 MRPS17Q9Y2R5 130 aaKnown RBP13.07□□□□□ -0.32
SMARCA5-201ENST00000283131 MANSC4A6NHS7 340 aaPredicted RBP13.07□□□□□ -0.32
SMARCA5-201ENST00000283131 LACTBL1A8MY62 500 aa13.07□□□□□ -0.32
SMARCA5-201ENST00000283131 RNASEH2AO75792 299 aaKnown RBP13.07□□□□□ -0.32
SMARCA5-201ENST00000283131 HCKP08631 526 aa13.07□□□□□ -0.32
SMARCA5-201ENST00000283131 PDSS1Q5T2R2 415 aa13.07□□□□□ -0.32
SMARCA5-201ENST00000283131 TIGD4Q8IY51 512 aa13.07□□□□□ -0.32
SMARCA5-201ENST00000283131 ANKRD7Q92527 254 aa13.07□□□□□ -0.32
SMARCA5-201ENST00000283131 KCTD5Q9NXV2 234 aa13.07□□□□□ -0.32
SMARCA5-201ENST00000283131 TBC1D14Q9P2M4 693 aa13.07□□□□□ -0.32
SMARCA5-201ENST00000283131 A0A1W2PRQ8 180 aa13.07□□□□□ -0.32
SMARCA5-201ENST00000283131 IFI30P13284 250 aa13.07□□□□□ -0.32
SMARCA5-201ENST00000283131 AGXTP21549 392 aa13.07□□□□□ -0.32
SMARCA5-201ENST00000283131 TXNRD3Q86VQ6 643 aa13.07□□□□□ -0.32
SMARCA5-201ENST00000283131 OR52J3Q8NH60 311 aa13.07□□□□□ -0.32
SMARCA5-201ENST00000283131 OR14C36Q8NHC7 312 aa13.07□□□□□ -0.32
SMARCA5-201ENST00000283131 SEC14L1Q92503 715 aa13.07□□□□□ -0.32
SMARCA5-201ENST00000283131 RCN3Q96D15 328 aa13.07□□□□□ -0.32
SMARCA5-201ENST00000283131 AGO4Q9HCK5 861 aaKnown RBP13.07□□□□□ -0.32
SMARCA5-201ENST00000283131 WASF2Q9Y6W5 498 aa13.07□□□□□ -0.32
SMARCA5-201ENST00000283131 LRRC72A6NJI9 287 aa13.06□□□□□ -0.32
SMARCA5-201ENST00000283131 ELOA3DA6NLF2 546 aaPredicted RBP13.06□□□□□ -0.32
SMARCA5-201ENST00000283131 PPP1R3GB7ZBB8 358 aa13.06□□□□□ -0.32
SMARCA5-201ENST00000283131 NEDD8-MDP1E9PL57 170 aa13.06□□□□□ -0.32
SMARCA5-201ENST00000283131 TBX1O43435 398 aa13.06□□□□□ -0.32
SMARCA5-201ENST00000283131 BCKDHAP12694 445 aa13.06□□□□□ -0.32
SMARCA5-201ENST00000283131 CD47Q08722 323 aa13.06□□□□□ -0.32
SMARCA5-201ENST00000283131 UBAP2LQ14157 1087 aaKnown RBP13.06□□□□□ -0.32
SMARCA5-201ENST00000283131 HEPACAMQ14CZ8 416 aa13.06□□□□□ -0.32
SMARCA5-201ENST00000283131 CARTPTQ16568 116 aa13.06□□□□□ -0.32
SMARCA5-201ENST00000283131 ELOA3BQ3SY89 546 aa13.06□□□□□ -0.32
SMARCA5-201ENST00000283131 OXR1Q8N573 874 aa13.06□□□□□ -0.32
SMARCA5-201ENST00000283131 AGBL3Q8NEM8 1001 aa13.06□□□□□ -0.32
SMARCA5-201ENST00000283131 ELOA3Q8NG57 546 aa13.06□□□□□ -0.32
SMARCA5-201ENST00000283131 EBNA1BP2Q99848 306 aaKnown RBP13.06□□□□□ -0.32
SMARCA5-201ENST00000283131 SEC61A2Q9H9S3 476 aa13.06□□□□□ -0.32
SMARCA5-201ENST00000283131 C1orf109Q9NX04 203 aa13.06□□□□□ -0.32
SMARCA5-201ENST00000283131 GSKIPQ9P0R6 139 aa13.06□□□□□ -0.32
SMARCA5-201ENST00000283131 A0A0J9YYE9 177 aa13.06□□□□□ -0.32
SMARCA5-201ENST00000283131 FAM237BA0A1B0GVD1 139 aa13.06□□□□□ -0.32
SMARCA5-201ENST00000283131 ATP6AP2A0A1C7CYW4 349 aa13.06□□□□□ -0.32
SMARCA5-201ENST00000283131 E5RJQ4 531 aa13.06□□□□□ -0.32
SMARCA5-201ENST00000283131 ATP6AP2O75787 350 aa13.06□□□□□ -0.32
SMARCA5-201ENST00000283131 ZNF35P13682 527 aa13.06□□□□□ -0.32
SMARCA5-201ENST00000283131 CCNOP22674 350 aa13.06□□□□□ -0.32
SMARCA5-201ENST00000283131 MSX1P28360 303 aa13.06□□□□□ -0.32
SMARCA5-201ENST00000283131 EPHX2P34913 555 aa13.06□□□□□ -0.32
SMARCA5-201ENST00000283131 ITGA7Q13683 1181 aa13.06□□□□□ -0.32
SMARCA5-201ENST00000283131 ZNF398Q8TD17 642 aa13.06□□□□□ -0.32
SMARCA5-201ENST00000283131 NIFKQ9BYG3 293 aaKnown RBP13.06□□□□□ -0.32
SMARCA5-201ENST00000283131 IRF2BPLQ9H1B7 796 aa13.06□□□□□ -0.32
SMARCA5-201ENST00000283131 MKKSQ9NPJ1 570 aaPredicted RBP13.06□□□□□ -0.32
SMARCA5-201ENST00000283131 CAPN6Q9Y6Q1 641 aa13.06□□□□□ -0.32
SMARCA5-201ENST00000283131 TMEM2Q9UHN6 1383 aa13.06□□□□□ -0.32
SMARCA5-201ENST00000283131 FGF1P05230 155 aa13.06□□□□□ -0.32
SMARCA5-201ENST00000283131 PEPDP12955 493 aa13.06□□□□□ -0.32
SMARCA5-201ENST00000283131 OR12D2P58182 307 aa13.06□□□□□ -0.32
SMARCA5-201ENST00000283131 NRG1Q02297 640 aaPredicted RBP13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms