RNA–Protein interactions for RNA: ENST00000279452.10

CD44-204, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-204ENST00000279452 SH3KBP1Q96B97 665 aa6.41□□□□□ -1.38
CD44-204ENST00000279452 FAM136AQ96C01 138 aa6.41□□□□□ -1.38
CD44-204ENST00000279452 C12orf66Q96MD2 445 aa6.41□□□□□ -1.38
CD44-204ENST00000279452 CCM2Q9BSQ5 444 aa6.41□□□□□ -1.38
CD44-204ENST00000279452 FAM167BQ9BTA0 163 aa6.41□□□□□ -1.38
CD44-204ENST00000279452 LDHAL6BQ9BYZ2 381 aaPredicted RBP6.41□□□□□ -1.38
CD44-204ENST00000279452 FOXP3Q9BZS1 431 aa6.41□□□□□ -1.38
CD44-204ENST00000279452 CCDC68Q9H2F9 335 aa6.41□□□□□ -1.38
CD44-204ENST00000279452 COG4Q9H9E3 785 aa6.41□□□□□ -1.38
CD44-204ENST00000279452 RDH14Q9HBH5 336 aa6.41□□□□□ -1.38
CD44-204ENST00000279452 SARS2Q9NP81 518 aaKnown RBP6.41□□□□□ -1.38
CD44-204ENST00000279452 POT1Q9NUX5 634 aa6.41□□□□□ -1.38
CD44-204ENST00000279452 SCHIP1Q9P0W5 487 aaPredicted RBP6.41□□□□□ -1.38
CD44-204ENST00000279452 CPNE7Q9UBL6 633 aa6.41□□□□□ -1.38
CD44-204ENST00000279452 ZC3H7BQ9UGR2 993 aaKnown RBP6.41□□□□□ -1.38
CD44-204ENST00000279452 KLHL3Q9UH77 587 aa6.41□□□□□ -1.38
CD44-204ENST00000279452 GNPTGQ9UJJ9 305 aa6.41□□□□□ -1.38
CD44-204ENST00000279452 WDR37Q9Y2I8 494 aa6.41□□□□□ -1.38
CD44-204ENST00000279452 CRYL1Q9Y2S2 319 aa6.41□□□□□ -1.38
CD44-204ENST00000279452 NEUROG3Q9Y4Z2 214 aa6.41□□□□□ -1.38
CD44-204ENST00000279452 PCDHB1Q9Y5F3 818 aa6.41□□□□□ -1.38
CD44-204ENST00000279452 DNMT3AQ9Y6K1 912 aaPredicted RBP6.41□□□□□ -1.38
CD44-204ENST00000279452 AK5Q9Y6K8 562 aa6.41□□□□□ -1.38
CD44-204ENST00000279452 PRSS21Q9Y6M0 314 aa6.41□□□□□ -1.38
CD44-204ENST00000279452 EP300Q09472 2414 aaPredicted RBP6.41□□□□□ -1.38
CD44-204ENST00000279452 VPS13AQ96RL7 3174 aa6.41□□□□□ -1.38
CD44-204ENST00000279452 DOCK9Q9BZ29 2069 aa6.41□□□□□ -1.38
CD44-204ENST00000279452 MYLKQ15746 1914 aa6.4□□□□□ -1.38
CD44-204ENST00000279452 FAM186AA6NE01 2351 aa6.4□□□□□ -1.38
CD44-204ENST00000279452 DMDP11532 3685 aa6.4□□□□□ -1.38
CD44-204ENST00000279452 GVINP1Q7Z2Y8 2422 aa6.4□□□□□ -1.38
CD44-204ENST00000279452 IGLV3-16A0A075B6K0 115 aa6.4□□□□□ -1.38
CD44-204ENST00000279452 PRAMEF33A0A0G2JMD5 474 aa6.4□□□□□ -1.38
CD44-204ENST00000279452 A0A1W2PQM1 296 aa6.4□□□□□ -1.38
CD44-204ENST00000279452 ESYT3A0FGR9 886 aa6.4□□□□□ -1.38
CD44-204ENST00000279452 KLHL33A6NCF5 533 aa6.4□□□□□ -1.38
CD44-204ENST00000279452 A6NCN8 305 aa6.4□□□□□ -1.38
CD44-204ENST00000279452 AGAP14A8MT82 685 aa6.4□□□□□ -1.38
CD44-204ENST00000279452 IQCF5A8MTL0 148 aa6.4□□□□□ -1.38
CD44-204ENST00000279452 PRMT5O14744 637 aaPredicted RBP6.4□□□□□ -1.38
CD44-204ENST00000279452 TCEA3O75764 348 aa6.4□□□□□ -1.38
CD44-204ENST00000279452 USP1O94782 785 aa6.4□□□□□ -1.38
CD44-204ENST00000279452 DKK1O94907 266 aa6.4□□□□□ -1.38
CD44-204ENST00000279452 APOA4P06727 396 aa6.4□□□□□ -1.38
CD44-204ENST00000279452 MTHFD1P11586 935 aaKnown RBP6.4□□□□□ -1.38
CD44-204ENST00000279452 PNLIPP16233 465 aa6.4□□□□□ -1.38
CD44-204ENST00000279452 TYRP1P17643 537 aa6.4□□□□□ -1.38
CD44-204ENST00000279452 CHRM3P20309 590 aa6.4□□□□□ -1.38
CD44-204ENST00000279452 OGNP20774 298 aaKnown RBP6.4□□□□□ -1.38
CD44-204ENST00000279452 FMO4P31512 558 aa6.4□□□□□ -1.38
CD44-204ENST00000279452 ELK3P41970 407 aa6.4□□□□□ -1.38
CD44-204ENST00000279452 PLTPP55058 493 aa6.4□□□□□ -1.38
CD44-204ENST00000279452 INHBCP55103 352 aa6.4□□□□□ -1.38
CD44-204ENST00000279452 SLC7A5Q01650 507 aa6.4□□□□□ -1.38
CD44-204ENST00000279452 DMPKQ09013 629 aa6.4□□□□□ -1.38
CD44-204ENST00000279452 HSPA14Q0VDF9 509 aa6.4□□□□□ -1.38
CD44-204ENST00000279452 CTBP1Q13363 440 aa6.4□□□□□ -1.38
CD44-204ENST00000279452 GPR18Q14330 331 aa6.4□□□□□ -1.38
CD44-204ENST00000279452 CLCA4Q14CN2 919 aa6.4□□□□□ -1.38
CD44-204ENST00000279452 RPE65Q16518 533 aa6.4□□□□□ -1.38
CD44-204ENST00000279452 MSS51Q4VC12 460 aa6.4□□□□□ -1.38
CD44-204ENST00000279452 HSP90AA5PQ58FG0 334 aa6.4□□□□□ -1.38
CD44-204ENST00000279452 C3orf38Q5JPI3 329 aa6.4□□□□□ -1.38
CD44-204ENST00000279452 SPANXN3Q5MJ09 141 aa6.4□□□□□ -1.38
CD44-204ENST00000279452 AGAP9Q5VTM2 703 aa6.4□□□□□ -1.38
CD44-204ENST00000279452 NEPROQ6NW34 567 aa6.4□□□□□ -1.38
CD44-204ENST00000279452 ARMC6Q6NXE6 501 aa6.4□□□□□ -1.38
CD44-204ENST00000279452 PACS1Q6VY07 963 aa6.4□□□□□ -1.38
CD44-204ENST00000279452 CENPUQ71F23 418 aa6.4□□□□□ -1.38
CD44-204ENST00000279452 PIM3Q86V86 326 aa6.4□□□□□ -1.38
CD44-204ENST00000279452 KCNMB4Q86W47 210 aa6.4□□□□□ -1.38
CD44-204ENST00000279452 DENND6AQ8IWF6 608 aa6.4□□□□□ -1.38
CD44-204ENST00000279452 HOMEZQ8IX15 550 aa6.4□□□□□ -1.38
CD44-204ENST00000279452 UNC5BQ8IZJ1 945 aa6.4□□□□□ -1.38
CD44-204ENST00000279452 KRT222Q8N1A0 295 aa6.4□□□□□ -1.38
CD44-204ENST00000279452 CEP112Q8N8E3 955 aa6.4□□□□□ -1.38
CD44-204ENST00000279452 FBXO36Q8NEA4 188 aa6.4□□□□□ -1.38
CD44-204ENST00000279452 GPR150Q8NGU9 434 aa6.4□□□□□ -1.38
CD44-204ENST00000279452 CFAP61Q8NHU2 1237 aa6.4□□□□□ -1.38
CD44-204ENST00000279452 CALML6Q8TD86 181 aa6.4□□□□□ -1.38
CD44-204ENST00000279452 NCSTNQ92542 709 aa6.4□□□□□ -1.38
CD44-204ENST00000279452 ATXN7L3BQ96GX2 97 aa6.4□□□□□ -1.38
CD44-204ENST00000279452 TMEM74Q96NL1 305 aa6.4□□□□□ -1.38
CD44-204ENST00000279452 FCRL3Q96P31 734 aaPredicted RBP6.4□□□□□ -1.38
CD44-204ENST00000279452 PANX3Q96QZ0 392 aa6.4□□□□□ -1.38
CD44-204ENST00000279452 FERD3LQ96RJ6 166 aa6.4□□□□□ -1.38
CD44-204ENST00000279452 EBNA1BP2Q99848 306 aaKnown RBP6.4□□□□□ -1.38
CD44-204ENST00000279452 ERP44Q9BS26 406 aa6.4□□□□□ -1.38
CD44-204ENST00000279452 HGH1Q9BTY7 390 aa6.4□□□□□ -1.38
CD44-204ENST00000279452 TBC1D10AQ9BXI6 508 aa6.4□□□□□ -1.38
CD44-204ENST00000279452 STRADBQ9C0K7 418 aa6.4□□□□□ -1.38
CD44-204ENST00000279452 SAYSD1Q9NPB0 183 aa6.4□□□□□ -1.38
CD44-204ENST00000279452 FBXO6Q9NRD1 293 aaPredicted RBP6.4□□□□□ -1.38
CD44-204ENST00000279452 IARS2Q9NSE4 1012 aaKnown RBP6.4□□□□□ -1.38
CD44-204ENST00000279452 AKAP7Q9P0M2 348 aaPredicted RBP6.4□□□□□ -1.38
CD44-204ENST00000279452 ACSL5Q9ULC5 683 aa6.4□□□□□ -1.38
CD44-204ENST00000279452 VPS9D1Q9Y2B5 631 aa6.4□□□□□ -1.38
CD44-204ENST00000279452 MSRB2Q9Y3D2 182 aa6.4□□□□□ -1.38
CD44-204ENST00000279452 MRFAP1Q9Y605 127 aa6.4□□□□□ -1.38
CD44-204ENST00000279452 ZNF106Q9H2Y7 1883 aaKnown RBP6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms