RNA–Protein interactions for RNA: ENST00000274071.6

PDGFC-201, Transcript of platelet derived growth factor C, humanhuman

TSL 1 (best)

Gene PDGFC, Length 2,987 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-201ENST00000274071 PCDHA11Q9Y5I1 949 aa9.11□□□□□ -0.95
PDGFC-201ENST00000274071 PEX16Q9Y5Y5 336 aa9.11□□□□□ -0.95
PDGFC-201ENST00000274071 UPK1AO00322 258 aa9.11□□□□□ -0.95
PDGFC-201ENST00000274071 SDHDO14521 159 aa9.11□□□□□ -0.95
PDGFC-201ENST00000274071 PMM2O15305 246 aa9.11□□□□□ -0.95
PDGFC-201ENST00000274071 TBC1D4O60343 1298 aa9.11□□□□□ -0.95
PDGFC-201ENST00000274071 PMPCBO75439 489 aa9.11□□□□□ -0.95
PDGFC-201ENST00000274071 WDPCPO95876 746 aa9.11□□□□□ -0.95
PDGFC-201ENST00000274071 NPPAP01160 153 aa9.11□□□□□ -0.95
PDGFC-201ENST00000274071 SUPT20HL2P0C7V6 817 aa9.11□□□□□ -0.95
PDGFC-201ENST00000274071 ZNF3P17036 446 aa9.11□□□□□ -0.95
PDGFC-201ENST00000274071 SOX11P35716 441 aa9.11□□□□□ -0.95
PDGFC-201ENST00000274071 FLI1Q01543 452 aaPredicted RBP9.11□□□□□ -0.95
PDGFC-201ENST00000274071 SMAD1Q15797 465 aaKnown RBP9.11□□□□□ -0.95
PDGFC-201ENST00000274071 EML3Q32P44 896 aa9.11□□□□□ -0.95
PDGFC-201ENST00000274071 CYP27C1Q4G0S4 372 aa9.11□□□□□ -0.95
PDGFC-201ENST00000274071 ODR4Q5SWX8 454 aa9.11□□□□□ -0.95
PDGFC-201ENST00000274071 ILDR2Q71H61 639 aa9.11□□□□□ -0.95
PDGFC-201ENST00000274071 CLEC10AQ8IUN9 316 aa9.11□□□□□ -0.95
PDGFC-201ENST00000274071 DNERQ8NFT8 737 aa9.11□□□□□ -0.95
PDGFC-201ENST00000274071 OR9I1Q8NGQ6 314 aa9.11□□□□□ -0.95
PDGFC-201ENST00000274071 RBPMSQ93062 196 aaKnown RBP9.11□□□□□ -0.95
PDGFC-201ENST00000274071 ZDHHC15Q96MV8 337 aa9.11□□□□□ -0.95
PDGFC-201ENST00000274071 SEPHS2Q99611 448 aa9.11□□□□□ -0.95
PDGFC-201ENST00000274071 PPIL3Q9H2H8 161 aaKnown RBP9.11□□□□□ -0.95
PDGFC-201ENST00000274071 MUTYHQ9UIF7 546 aa9.11□□□□□ -0.95
PDGFC-201ENST00000274071 LYVE1Q9Y5Y7 322 aa9.11□□□□□ -0.95
PDGFC-201ENST00000274071 QSER1Q2KHR3 1735 aa9.1□□□□□ -0.95
PDGFC-201ENST00000274071 ADAMTSL1Q8N6G6 1762 aa9.1□□□□□ -0.95
PDGFC-201ENST00000274071 RPS10-NUDT3A0A1W2PQS6 291 aa9.1□□□□□ -0.95
PDGFC-201ENST00000274071 TCRBV5S2A0A599 114 aa9.1□□□□□ -0.95
PDGFC-201ENST00000274071 OR6C65A6NJZ3 312 aa9.1□□□□□ -0.95
PDGFC-201ENST00000274071 SLCO1B7G3V0H7 640 aa9.1□□□□□ -0.95
PDGFC-201ENST00000274071 HLA-DOAP06340 250 aa9.1□□□□□ -0.95
PDGFC-201ENST00000274071 CHMP24386 653 aa9.1□□□□□ -0.95
PDGFC-201ENST00000274071 POU1F1P28069 291 aa9.1□□□□□ -0.95
PDGFC-201ENST00000274071 NAGLUP54802 743 aa9.1□□□□□ -0.95
PDGFC-201ENST00000274071 NOMO3P69849 1222 aa9.1□□□□□ -0.95
PDGFC-201ENST00000274071 ZNF169Q14929 603 aaPredicted RBP9.1□□□□□ -0.95
PDGFC-201ENST00000274071 HKDC1Q2TB90 917 aa9.1□□□□□ -0.95
PDGFC-201ENST00000274071 ALKBH2Q6NS38 261 aa9.1□□□□□ -0.95
PDGFC-201ENST00000274071 HACD2Q6Y1H2 254 aa9.1□□□□□ -0.95
PDGFC-201ENST00000274071 HTR3DQ70Z44 454 aa9.1□□□□□ -0.95
PDGFC-201ENST00000274071 LIMS2Q7Z4I7 341 aa9.1□□□□□ -0.95
PDGFC-201ENST00000274071 C9orf62Q8N4C0 152 aa9.1□□□□□ -0.95
PDGFC-201ENST00000274071 OR4D10Q8NGI6 311 aa9.1□□□□□ -0.95
PDGFC-201ENST00000274071 CNIH3Q8TBE1 160 aa9.1□□□□□ -0.95
PDGFC-201ENST00000274071 FRS2Q8WU20 508 aa9.1□□□□□ -0.95
PDGFC-201ENST00000274071 STON2Q8WXE9 905 aa9.1□□□□□ -0.95
PDGFC-201ENST00000274071 C18orf25Q96B23 403 aaPredicted RBP9.1□□□□□ -0.95
PDGFC-201ENST00000274071 LINC00052Q96N35 136 aa9.1□□□□□ -0.95
PDGFC-201ENST00000274071 FRMD6Q96NE9 622 aa9.1□□□□□ -0.95
PDGFC-201ENST00000274071 MBOAT4Q96T53 435 aa9.1□□□□□ -0.95
PDGFC-201ENST00000274071 SLC25A23Q9BV35 468 aa9.1□□□□□ -0.95
PDGFC-201ENST00000274071 ELOVL6Q9H5J4 265 aa9.1□□□□□ -0.95
PDGFC-201ENST00000274071 KIF17Q9P2E2 1029 aa9.1□□□□□ -0.95
PDGFC-201ENST00000274071 SRRDQ9UH36 339 aa9.1□□□□□ -0.95
PDGFC-201ENST00000274071 RAB23Q9ULC3 237 aa9.1□□□□□ -0.95
PDGFC-201ENST00000274071 TNPO3Q9Y5L0 923 aaKnown RBP9.1□□□□□ -0.95
PDGFC-201ENST00000274071 SH3D21A4FU49 640 aa9.1□□□□□ -0.95
PDGFC-201ENST00000274071 B4DXG7 233 aa9.1□□□□□ -0.95
PDGFC-201ENST00000274071 PRMT5O14744 637 aaPredicted RBP9.1□□□□□ -0.95
PDGFC-201ENST00000274071 APOL1O14791 398 aa9.1□□□□□ -0.95
PDGFC-201ENST00000274071 AIREO43918 545 aa9.1□□□□□ -0.95
PDGFC-201ENST00000274071 DFNA5O60443 496 aa9.1□□□□□ -0.95
PDGFC-201ENST00000274071 CYP7B1O75881 506 aa9.1□□□□□ -0.95
PDGFC-201ENST00000274071 NDUFB10O96000 172 aa9.1□□□□□ -0.95
PDGFC-201ENST00000274071 SLURP2P0DP57 97 aa9.1□□□□□ -0.95
PDGFC-201ENST00000274071 HSD17B1P14061 328 aa9.1□□□□□ -0.95
PDGFC-201ENST00000274071 HLA-DMAP28067 261 aa9.1□□□□□ -0.95
PDGFC-201ENST00000274071 GPC1P35052 558 aa9.1□□□□□ -0.95
PDGFC-201ENST00000274071 GLUD2P49448 558 aa9.1□□□□□ -0.95
PDGFC-201ENST00000274071 MEOX2P50222 304 aa9.1□□□□□ -0.95
PDGFC-201ENST00000274071 PRELPP51888 382 aa9.1□□□□□ -0.95
PDGFC-201ENST00000274071 TCP10Q12799 353 aa9.1□□□□□ -0.95
PDGFC-201ENST00000274071 CDK5R2Q13319 367 aa9.1□□□□□ -0.95
PDGFC-201ENST00000274071 BAK1Q16611 211 aa9.1□□□□□ -0.95
PDGFC-201ENST00000274071 SYT16Q17RD7 645 aa9.1□□□□□ -0.95
PDGFC-201ENST00000274071 KIF19Q2TAC6 998 aa9.1□□□□□ -0.95
PDGFC-201ENST00000274071 FLYWCH1Q4VC44 716 aa9.1□□□□□ -0.95
PDGFC-201ENST00000274071 DACT2Q5SW24 774 aa9.1□□□□□ -0.95
PDGFC-201ENST00000274071 FCRLBQ6BAA4 426 aa9.1□□□□□ -0.95
PDGFC-201ENST00000274071 KDELC1Q6UW63 502 aa9.1□□□□□ -0.95
PDGFC-201ENST00000274071 ZNF782Q6ZMW2 699 aaPredicted RBP9.1□□□□□ -0.95
PDGFC-201ENST00000274071 BNIPLQ7Z465 357 aa9.1□□□□□ -0.95
PDGFC-201ENST00000274071 JAZF1Q86VZ6 243 aa9.1□□□□□ -0.95
PDGFC-201ENST00000274071 RASAL3Q86YV0 1011 aa9.1□□□□□ -0.95
PDGFC-201ENST00000274071 ARL6IP6Q8N6S5 226 aa9.1□□□□□ -0.95
PDGFC-201ENST00000274071 ATAD1Q8NBU5 361 aa9.1□□□□□ -0.95
PDGFC-201ENST00000274071 OR6M1Q8NGM8 313 aa9.1□□□□□ -0.95
PDGFC-201ENST00000274071 UTP15Q8TED0 518 aaKnown RBP9.1□□□□□ -0.95
PDGFC-201ENST00000274071 REPS1Q96D71 796 aa9.1□□□□□ -0.95
PDGFC-201ENST00000274071 MCEEQ96PE7 176 aa9.1□□□□□ -0.95
PDGFC-201ENST00000274071 NPAS1Q99742 590 aa9.1□□□□□ -0.95
PDGFC-201ENST00000274071 FEM1AQ9BSK4 669 aa9.1□□□□□ -0.95
PDGFC-201ENST00000274071 LDAHQ9H6V9 325 aa9.1□□□□□ -0.95
PDGFC-201ENST00000274071 SMURF2Q9HAU4 748 aa9.1□□□□□ -0.95
PDGFC-201ENST00000274071 RC3H2Q9HBD1 1191 aaKnown RBP9.1□□□□□ -0.95
PDGFC-201ENST00000274071 ABCD2Q9UBJ2 740 aa9.1□□□□□ -0.95
PDGFC-201ENST00000274071 TRAPPC4Q9Y296 219 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms