RNA–Protein interactions for RNA: ENST00000266679.8

CPSF6-201, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 1 (best) BASIC

Gene CPSF6, Length 2,229 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-201ENST00000266679 CLPBQ9H078 707 aa12.72□□□□□ -0.37
CPSF6-201ENST00000266679 ARMC1Q9NVT9 282 aa12.72□□□□□ -0.37
CPSF6-201ENST00000266679 STOML2Q9UJZ1 356 aa12.72□□□□□ -0.37
CPSF6-201ENST00000266679 RNF11Q9Y3C5 154 aa12.72□□□□□ -0.37
CPSF6-201ENST00000266679 TTC28Q96AY4 2481 aa12.72□□□□□ -0.37
CPSF6-201ENST00000266679 ZFC3H1O60293 1989 aaKnown RBP12.72□□□□□ -0.37
CPSF6-201ENST00000266679 C1orf232A0A0U1RR37 186 aa12.72□□□□□ -0.37
CPSF6-201ENST00000266679 SMIM31A0A1B0GVY4 71 aa12.72□□□□□ -0.37
CPSF6-201ENST00000266679 FAM149AA5PLN7 773 aa12.72□□□□□ -0.37
CPSF6-201ENST00000266679 AQP12BA6NM10 295 aa12.72□□□□□ -0.37
CPSF6-201ENST00000266679 KATNA1O75449 491 aa12.72□□□□□ -0.37
CPSF6-201ENST00000266679 EEDO75530 441 aaKnown RBP12.72□□□□□ -0.37
CPSF6-201ENST00000266679 CXCL10P02778 98 aa12.72□□□□□ -0.37
CPSF6-201ENST00000266679 TFAP2AP05549 437 aa12.72□□□□□ -0.37
CPSF6-201ENST00000266679 CAPN1P07384 714 aa12.72□□□□□ -0.37
CPSF6-201ENST00000266679 CNPP09543 421 aaKnown RBP12.72□□□□□ -0.37
CPSF6-201ENST00000266679 NCK1P16333 377 aa12.72□□□□□ -0.37
CPSF6-201ENST00000266679 GSK3BP49841 420 aa12.72□□□□□ -0.37
CPSF6-201ENST00000266679 POLR2JP52435 117 aaKnown RBP12.72□□□□□ -0.37
CPSF6-201ENST00000266679 ADARP55265 1226 aaKnown RBP12.72□□□□□ -0.37
CPSF6-201ENST00000266679 AP1S1P61966 158 aa12.72□□□□□ -0.37
CPSF6-201ENST00000266679 ATP6AP1LQ52LC2 224 aa12.72□□□□□ -0.37
CPSF6-201ENST00000266679 C6orf136Q5SQH8 315 aa12.72□□□□□ -0.37
CPSF6-201ENST00000266679 LCN8Q6JVE9 175 aa12.72□□□□□ -0.37
CPSF6-201ENST00000266679 IL27RAQ6UWB1 636 aa12.72□□□□□ -0.37
CPSF6-201ENST00000266679 SBSNQ6UWP8 590 aa12.72□□□□□ -0.37
CPSF6-201ENST00000266679 ZBTB49Q6ZSB9 765 aa12.72□□□□□ -0.37
CPSF6-201ENST00000266679 AQP12AQ8IXF9 295 aa12.72□□□□□ -0.37
CPSF6-201ENST00000266679 METTL25Q8N6Q8 603 aa12.72□□□□□ -0.37
CPSF6-201ENST00000266679 DCAF4L2Q8NA75 395 aa12.72□□□□□ -0.37
CPSF6-201ENST00000266679 TMEM74Q96NL1 305 aa12.72□□□□□ -0.37
CPSF6-201ENST00000266679 TMEM79Q9BSE2 394 aa12.72□□□□□ -0.37
CPSF6-201ENST00000266679 MAGEE1Q9HCI5 957 aa12.72□□□□□ -0.37
CPSF6-201ENST00000266679 PFDN4Q9NQP4 134 aa12.72□□□□□ -0.37
CPSF6-201ENST00000266679 CCM2LQ9NUG4 571 aaPredicted RBP12.72□□□□□ -0.37
CPSF6-201ENST00000266679 SUN2Q9UH99 717 aa12.72□□□□□ -0.37
CPSF6-201ENST00000266679 LEF1Q9UJU2 399 aaPredicted RBP12.72□□□□□ -0.37
CPSF6-201ENST00000266679 PCDHB1Q9Y5F3 818 aa12.72□□□□□ -0.37
CPSF6-201ENST00000266679 PRSS21Q9Y6M0 314 aa12.72□□□□□ -0.37
CPSF6-201ENST00000266679 A8MX80 341 aa12.71□□□□□ -0.37
CPSF6-201ENST00000266679 H0YJX3 145 aa12.71□□□□□ -0.37
CPSF6-201ENST00000266679 GAPDHSO14556 408 aaPredicted RBP12.71□□□□□ -0.37
CPSF6-201ENST00000266679 OR7A17O14581 309 aa12.71□□□□□ -0.37
CPSF6-201ENST00000266679 GREM1O60565 184 aa12.71□□□□□ -0.37
CPSF6-201ENST00000266679 ARHGEF15O94989 841 aa12.71□□□□□ -0.37
CPSF6-201ENST00000266679 GUCA1CO95843 209 aa12.71□□□□□ -0.37
CPSF6-201ENST00000266679 PSMA4P25789 261 aaKnown RBP12.71□□□□□ -0.37
CPSF6-201ENST00000266679 OXTRP30559 389 aa12.71□□□□□ -0.37
CPSF6-201ENST00000266679 HMGCLP35914 325 aa12.71□□□□□ -0.37
CPSF6-201ENST00000266679 RPL5P46777 297 aaKnown RBP12.71□□□□□ -0.37
CPSF6-201ENST00000266679 EPHB3P54753 998 aa12.71□□□□□ -0.37
CPSF6-201ENST00000266679 CYP4F8P98187 520 aa12.71□□□□□ -0.37
CPSF6-201ENST00000266679 PRKCQQ04759 706 aa12.71□□□□□ -0.37
CPSF6-201ENST00000266679 LIPEQ05469 1076 aa12.71□□□□□ -0.37
CPSF6-201ENST00000266679 NADK2Q4G0N4 442 aa12.71□□□□□ -0.37
CPSF6-201ENST00000266679 IRAK1BP1Q5VVH5 260 aa12.71□□□□□ -0.37
CPSF6-201ENST00000266679 SPRED2Q7Z698 418 aa12.71□□□□□ -0.37
CPSF6-201ENST00000266679 ADAMTSL2Q86TH1 951 aa12.71□□□□□ -0.37
CPSF6-201ENST00000266679 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.71□□□□□ -0.37
CPSF6-201ENST00000266679 SFRP1Q8N474 314 aa12.71□□□□□ -0.37
CPSF6-201ENST00000266679 METTL6Q8TCB7 284 aa12.71□□□□□ -0.37
CPSF6-201ENST00000266679 ALG14Q96F25 216 aa12.71□□□□□ -0.37
CPSF6-201ENST00000266679 KCTD14Q9BQ13 255 aaPredicted RBP12.71□□□□□ -0.37
CPSF6-201ENST00000266679 APOL5Q9BWW9 433 aa12.71□□□□□ -0.37
CPSF6-201ENST00000266679 OSBPL11Q9BXB4 747 aa12.71□□□□□ -0.37
CPSF6-201ENST00000266679 CIPCQ9C0C6 399 aa12.71□□□□□ -0.37
CPSF6-201ENST00000266679 MTIF3Q9H2K0 278 aaKnown RBP12.71□□□□□ -0.37
CPSF6-201ENST00000266679 ASB8Q9H765 288 aa12.71□□□□□ -0.37
CPSF6-201ENST00000266679 CERS4Q9HA82 394 aa12.71□□□□□ -0.37
CPSF6-201ENST00000266679 PLK2Q9NYY3 685 aa12.71□□□□□ -0.37
CPSF6-201ENST00000266679 ACTR3BQ9P1U1 418 aa12.71□□□□□ -0.37
CPSF6-201ENST00000266679 HSFX1Q9UBD0 423 aa12.71□□□□□ -0.37
CPSF6-201ENST00000266679 INSL5Q9Y5Q6 135 aa12.71□□□□□ -0.37
CPSF6-201ENST00000266679 PRRC2BQ5JSZ5 2229 aaKnown RBP12.71□□□□□ -0.38
CPSF6-201ENST00000266679 DLL1O00548 723 aa12.7□□□□□ -0.38
CPSF6-201ENST00000266679 HTRA2O43464 458 aaPredicted RBP12.7□□□□□ -0.38
CPSF6-201ENST00000266679 TRIM16O95361 564 aa12.7□□□□□ -0.38
CPSF6-201ENST00000266679 LATS1O95835 1130 aa12.7□□□□□ -0.38
CPSF6-201ENST00000266679 SPATA31D3P0C874 917 aa12.7□□□□□ -0.38
CPSF6-201ENST00000266679 ZNF7P17097 686 aaPredicted RBP12.7□□□□□ -0.38
CPSF6-201ENST00000266679 PPP3CCP48454 512 aa12.7□□□□□ -0.38
CPSF6-201ENST00000266679 HSPA7P48741 367 aa12.7□□□□□ -0.38
CPSF6-201ENST00000266679 MRPL19P49406 292 aaKnown RBP12.7□□□□□ -0.38
CPSF6-201ENST00000266679 PLOD1Q02809 727 aaPredicted RBP12.7□□□□□ -0.38
CPSF6-201ENST00000266679 APOFQ13790 326 aa12.7□□□□□ -0.38
CPSF6-201ENST00000266679 GTF2H2Q13888 395 aa12.7□□□□□ -0.38
CPSF6-201ENST00000266679 NR6A1Q15406 480 aa12.7□□□□□ -0.38
CPSF6-201ENST00000266679 GTF2H2CQ6P1K8 395 aa12.7□□□□□ -0.38
CPSF6-201ENST00000266679 SLC2A7Q6PXP3 512 aa12.7□□□□□ -0.38
CPSF6-201ENST00000266679 Q6ZNB5 142 aa12.7□□□□□ -0.38
CPSF6-201ENST00000266679 RBM44Q6ZP01 1051 aaKnown RBP12.7□□□□□ -0.38
CPSF6-201ENST00000266679 Q6ZSR9 355 aa12.7□□□□□ -0.38
CPSF6-201ENST00000266679 SPATA31D4Q6ZUB0 917 aa12.7□□□□□ -0.38
CPSF6-201ENST00000266679 ADGRG5Q8IZF4 528 aa12.7□□□□□ -0.38
CPSF6-201ENST00000266679 OR4F6Q8NGB9 312 aa12.7□□□□□ -0.38
CPSF6-201ENST00000266679 DDI1Q8WTU0 396 aa12.7□□□□□ -0.38
CPSF6-201ENST00000266679 TSPEARQ8WU66 669 aa12.7□□□□□ -0.38
CPSF6-201ENST00000266679 ZFAND2BQ8WV99 257 aa12.7□□□□□ -0.38
CPSF6-201ENST00000266679 NCSTNQ92542 709 aa12.7□□□□□ -0.38
CPSF6-201ENST00000266679 TMEM169Q96HH4 297 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms