RNA–Protein interactions for RNA: ENST00000265896.9

SQLE-201, Transcript of squalene epoxidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SQLE, Length 2,961 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-201ENST00000265896 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.57■□□□□ 0.241e-6■□□□□ 10.8
SQLE-201ENST00000265896 TFB2MQ9H5Q4 396 aaKnown RBP16.57■□□□□ 0.24
SQLE-201ENST00000265896 HACD3Q9P035 362 aa16.57■□□□□ 0.24
SQLE-201ENST00000265896 PAPSS2O95340 614 aaPredicted RBP16.57■□□□□ 0.24
SQLE-201ENST00000265896 MLYCDO95822 493 aa16.57■□□□□ 0.24
SQLE-201ENST00000265896 GPIP06744 558 aa16.57■□□□□ 0.24
SQLE-201ENST00000265896 SPIDRQ14159 915 aa16.57■□□□□ 0.24
SQLE-201ENST00000265896 TAF1CQ15572 869 aaPredicted RBP16.57■□□□□ 0.24
SQLE-201ENST00000265896 CTXN3Q4LDR2 81 aa16.57■□□□□ 0.24
SQLE-201ENST00000265896 CTSL3PQ5NE16 218 aa16.57■□□□□ 0.24
SQLE-201ENST00000265896 CYP20A1Q6UW02 462 aa16.57■□□□□ 0.24
SQLE-201ENST00000265896 RSPO2Q6UXX9 243 aaPredicted RBP16.57■□□□□ 0.24
SQLE-201ENST00000265896 RNF175Q8N4F7 328 aa16.57■□□□□ 0.24
SQLE-201ENST00000265896 DDHD1Q8NEL9 900 aa16.57■□□□□ 0.24
SQLE-201ENST00000265896 EGFL8Q99944 293 aa16.57■□□□□ 0.24
SQLE-201ENST00000265896 BEGAINQ9BUH8 593 aa16.57■□□□□ 0.24
SQLE-201ENST00000265896 BDH2Q9BUT1 245 aa16.57■□□□□ 0.24
SQLE-201ENST00000265896 CINPQ9BW66 212 aaPredicted RBP16.57■□□□□ 0.24
SQLE-201ENST00000265896 TRIM54Q9BYV2 358 aa16.57■□□□□ 0.24
SQLE-201ENST00000265896 ARHGAP39Q9C0H5 1083 aa16.57■□□□□ 0.24
SQLE-201ENST00000265896 ADGRE2Q9UHX3 823 aa16.57■□□□□ 0.24
SQLE-201ENST00000265896 PNMA8BQ9ULN7 279 aaPredicted RBP16.57■□□□□ 0.24
SQLE-201ENST00000265896 COQ6Q9Y2Z9 468 aa16.57■□□□□ 0.24
SQLE-201ENST00000265896 UPK1AO00322 258 aa16.56■□□□□ 0.24
SQLE-201ENST00000265896 E2F3O00716 465 aa16.56■□□□□ 0.24
SQLE-201ENST00000265896 BCL10O95999 233 aa16.56■□□□□ 0.24
SQLE-201ENST00000265896 MYCLP1P12525 358 aaPredicted RBP16.56■□□□□ 0.24
SQLE-201ENST00000265896 DNAJB1P25685 340 aa16.56■□□□□ 0.24
SQLE-201ENST00000265896 PLA2G16P53816 162 aa16.56■□□□□ 0.24
SQLE-201ENST00000265896 AQP6Q13520 282 aa16.56■□□□□ 0.24
SQLE-201ENST00000265896 SPANXN4Q5MJ08 99 aa16.56■□□□□ 0.24
SQLE-201ENST00000265896 ATXN7L2Q5T6C5 722 aaPredicted RBP16.56■□□□□ 0.24
SQLE-201ENST00000265896 PRMT9Q6P2P2 845 aa16.56■□□□□ 0.24
SQLE-201ENST00000265896 FAM151BQ6UXP7 276 aa16.56■□□□□ 0.24
SQLE-201ENST00000265896 DLEU7Q6UYE1 221 aa16.56■□□□□ 0.24
SQLE-201ENST00000265896 Q6ZNX1 250 aa16.56■□□□□ 0.24
SQLE-201ENST00000265896 TBC1D21Q8IYX1 336 aa16.56■□□□□ 0.24
SQLE-201ENST00000265896 ITFG2Q969R8 447 aa16.56■□□□□ 0.24
SQLE-201ENST00000265896 AMBRA1Q9C0C7 1298 aa16.56■□□□□ 0.24
SQLE-201ENST00000265896 FBXO10Q9UK96 956 aa16.56■□□□□ 0.24
SQLE-201ENST00000265896 SLC30A1Q9Y6M5 507 aa16.56■□□□□ 0.24
SQLE-201ENST00000265896 GJB5O95377 273 aa16.56■□□□□ 0.24
SQLE-201ENST00000265896 MATN4O95460 622 aa16.56■□□□□ 0.24
SQLE-201ENST00000265896 TSPAN12O95859 305 aa16.56■□□□□ 0.24
SQLE-201ENST00000265896 THRBP10828 461 aa16.56■□□□□ 0.24
SQLE-201ENST00000265896 MAGP20916 626 aa16.56■□□□□ 0.24
SQLE-201ENST00000265896 ATP4BP51164 291 aa16.56■□□□□ 0.24
SQLE-201ENST00000265896 RAD23AP54725 363 aa16.56■□□□□ 0.24
SQLE-201ENST00000265896 NFKB2Q00653 900 aa16.56■□□□□ 0.24
SQLE-201ENST00000265896 CCNYL2Q5T2Q4 361 aa16.56■□□□□ 0.24
SQLE-201ENST00000265896 TMCO5AQ8N6Q1 288 aa16.56■□□□□ 0.24
SQLE-201ENST00000265896 CDC26Q8NHZ8 85 aa16.56■□□□□ 0.24
SQLE-201ENST00000265896 FAIMQ9NVQ4 179 aa16.56■□□□□ 0.24
SQLE-201ENST00000265896 KLQ9UEF7 1012 aa16.56■□□□□ 0.24
SQLE-201ENST00000265896 RBMX2Q9Y388 322 aaKnown RBP16.56■□□□□ 0.24
SQLE-201ENST00000265896 G3V2T6 193 aa16.56■□□□□ 0.24
SQLE-201ENST00000265896 FGF1P05230 155 aa16.56■□□□□ 0.24
SQLE-201ENST00000265896 RPS17P08708 135 aaKnown RBP16.56■□□□□ 0.24
SQLE-201ENST00000265896 FMO3P31513 532 aa16.56■□□□□ 0.24
SQLE-201ENST00000265896 MAP2K4P45985 399 aa16.56■□□□□ 0.24
SQLE-201ENST00000265896 IL2P60568 153 aa16.56■□□□□ 0.24
SQLE-201ENST00000265896 ADARB1P78563 741 aaKnown RBP16.56■□□□□ 0.24
SQLE-201ENST00000265896 FAM189BP81408 668 aa16.56■□□□□ 0.24
SQLE-201ENST00000265896 CHRNB3Q05901 458 aa16.56■□□□□ 0.24
SQLE-201ENST00000265896 VARS2Q5ST30 1063 aaKnown RBP16.56■□□□□ 0.24
SQLE-201ENST00000265896 ZDHHC13Q8IUH4 622 aa16.56■□□□□ 0.24
SQLE-201ENST00000265896 ATP6V0D2Q8N8Y2 350 aa16.56■□□□□ 0.24
SQLE-201ENST00000265896 UBE2FQ969M7 185 aa16.56■□□□□ 0.24
SQLE-201ENST00000265896 FAM162AQ96A26 154 aa16.56■□□□□ 0.24
SQLE-201ENST00000265896 BTN2A3PQ96KV6 586 aa16.56■□□□□ 0.24
SQLE-201ENST00000265896 CGREF1Q99674 301 aa16.56■□□□□ 0.24
SQLE-201ENST00000265896 KATNAL1Q9BW62 490 aa16.56■□□□□ 0.24
SQLE-201ENST00000265896 LRRC3Q9BY71 257 aa16.56■□□□□ 0.24
SQLE-201ENST00000265896 SYTL2Q9HCH5 934 aa16.56■□□□□ 0.24
SQLE-201ENST00000265896 INTS10Q9NVR2 710 aaKnown RBP16.56■□□□□ 0.24
SQLE-201ENST00000265896 PCDHB9Q9Y5E1 797 aa16.56■□□□□ 0.24
SQLE-201ENST00000265896 A0A0U1RQF3 1178 aa16.55■□□□□ 0.24
SQLE-201ENST00000265896 M0QZQ0 153 aa16.55■□□□□ 0.24
SQLE-201ENST00000265896 EEDO75530 441 aaKnown RBP16.55■□□□□ 0.24
SQLE-201ENST00000265896 FTH1P02794 183 aa16.55■□□□□ 0.24
SQLE-201ENST00000265896 UROSP10746 265 aa16.55■□□□□ 0.24
SQLE-201ENST00000265896 PKMP14618 531 aaKnown RBP16.55■□□□□ 0.24
SQLE-201ENST00000265896 PFKLP17858 780 aa16.55■□□□□ 0.24
SQLE-201ENST00000265896 NEK2P51955 445 aa16.55■□□□□ 0.24
SQLE-201ENST00000265896 ERVK-8P63133 956 aa16.55■□□□□ 0.24
SQLE-201ENST00000265896 KCNAB2Q13303 367 aa16.55■□□□□ 0.24
SQLE-201ENST00000265896 XAF1Q6GPH4 301 aa16.55■□□□□ 0.24
SQLE-201ENST00000265896 FAM117BQ6P1L5 589 aa16.55■□□□□ 0.24
SQLE-201ENST00000265896 DET1Q7L5Y6 550 aa16.55■□□□□ 0.24
SQLE-201ENST00000265896 HID1Q8IV36 788 aa16.55■□□□□ 0.24
SQLE-201ENST00000265896 CCDC117Q8IWD4 279 aaPredicted RBP16.55■□□□□ 0.24
SQLE-201ENST00000265896 OR56A4Q8NGH8 313 aa16.55■□□□□ 0.24
SQLE-201ENST00000265896 CD200R1Q8TD46 325 aa16.55■□□□□ 0.24
SQLE-201ENST00000265896 ZC3H15Q8WU90 426 aaKnown RBP16.55■□□□□ 0.24
SQLE-201ENST00000265896 SUSD3Q96L08 255 aa16.55■□□□□ 0.24
SQLE-201ENST00000265896 GPR62Q9BZJ7 368 aa16.55■□□□□ 0.24
SQLE-201ENST00000265896 IPPKQ9H8X2 491 aa16.55■□□□□ 0.24
SQLE-201ENST00000265896 LCHNA4D1U4 455 aa16.55■□□□□ 0.24
SQLE-201ENST00000265896 TNPO2O14787 897 aaKnown RBP16.55■□□□□ 0.24
SQLE-201ENST00000265896 STX7O15400 261 aaKnown RBP16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms