RNA–Protein interactions for RNA: ENST00000265044.6

SSR3-201, Transcript of signal sequence receptor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSR3, Length 3,716 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-201ENST00000265044 SFSWAPQ12872 951 aaKnown RBP9.18□□□□□ -0.94
SSR3-201ENST00000265044 LDLRAP1Q5SW96 308 aa9.18□□□□□ -0.94
SSR3-201ENST00000265044 ZNF678Q5SXM1 525 aa9.18□□□□□ -0.94
SSR3-201ENST00000265044 NAIF1Q69YI7 327 aaPredicted RBP9.18□□□□□ -0.94
SSR3-201ENST00000265044 FAM217AQ8IXS0 508 aa9.18□□□□□ -0.94
SSR3-201ENST00000265044 C2orf73Q8N5S3 287 aaPredicted RBP9.18□□□□□ -0.94
SSR3-201ENST00000265044 PCYOX1LQ8NBM8 494 aa9.18□□□□□ -0.94
SSR3-201ENST00000265044 CD200R1Q8TD46 325 aa9.18□□□□□ -0.94
SSR3-201ENST00000265044 SELENOMQ8WWX9 145 aa9.18□□□□□ -0.94
SSR3-201ENST00000265044 PRR11Q96HE9 360 aaPredicted RBP9.18□□□□□ -0.94
SSR3-201ENST00000265044 NSMCE3Q96MG7 304 aa9.18□□□□□ -0.94
SSR3-201ENST00000265044 LENG8Q96PV6 779 aaPredicted RBP9.18□□□□□ -0.94
SSR3-201ENST00000265044 KCNA7Q96RP8 456 aa9.18□□□□□ -0.94
SSR3-201ENST00000265044 ACAT2Q9BWD1 397 aa9.18□□□□□ -0.94
SSR3-201ENST00000265044 POPDC3Q9HBV1 291 aa9.18□□□□□ -0.94
SSR3-201ENST00000265044 NUDT4Q9NZJ9 180 aa9.18□□□□□ -0.94
SSR3-201ENST00000265044 PSMD13Q9UNM6 376 aa9.18□□□□□ -0.94
SSR3-201ENST00000265044 NUMBLQ9Y6R0 609 aa9.18□□□□□ -0.94
SSR3-201ENST00000265044 MATN2O00339 956 aa9.18□□□□□ -0.94
SSR3-201ENST00000265044 MID1O15344 667 aa9.18□□□□□ -0.94
SSR3-201ENST00000265044 SEC22BO75396 215 aa9.18□□□□□ -0.94
SSR3-201ENST00000265044 COX4I1P13073 169 aa9.18□□□□□ -0.94
SSR3-201ENST00000265044 IL12RB1P42701 662 aa9.18□□□□□ -0.94
SSR3-201ENST00000265044 KLF10Q13118 480 aa9.18□□□□□ -0.94
SSR3-201ENST00000265044 C16orf89Q6UX73 402 aa9.18□□□□□ -0.94
SSR3-201ENST00000265044 ZSWIM9Q86XI8 627 aa9.18□□□□□ -0.94
SSR3-201ENST00000265044 KYQ8NBH2 561 aa9.18□□□□□ -0.94
SSR3-201ENST00000265044 FGF14Q92915 247 aa9.18□□□□□ -0.94
SSR3-201ENST00000265044 GLYATL1Q969I3 302 aa9.18□□□□□ -0.94
SSR3-201ENST00000265044 PPWD1Q96BP3 646 aaKnown RBP9.18□□□□□ -0.94
SSR3-201ENST00000265044 SIPA1Q96FS4 1042 aa9.18□□□□□ -0.94
SSR3-201ENST00000265044 SLC30A3Q99726 388 aa9.18□□□□□ -0.94
SSR3-201ENST00000265044 C1QTNF7Q9BXJ2 289 aa9.18□□□□□ -0.94
SSR3-201ENST00000265044 PRSS21Q9Y6M0 314 aa9.18□□□□□ -0.94
SSR3-201ENST00000265044 WASF2Q9Y6W5 498 aa9.18□□□□□ -0.94
SSR3-201ENST00000265044 C9JVG2 144 aa9.17□□□□□ -0.94
SSR3-201ENST00000265044 PIP5K1BO14986 540 aa9.17□□□□□ -0.94
SSR3-201ENST00000265044 HOXC11O43248 304 aaPredicted RBP9.17□□□□□ -0.94
SSR3-201ENST00000265044 FZD6O60353 706 aa9.17□□□□□ -0.94
SSR3-201ENST00000265044 SNUPNO95149 360 aaKnown RBP9.17□□□□□ -0.94
SSR3-201ENST00000265044 CAPN1P07384 714 aa9.17□□□□□ -0.94
SSR3-201ENST00000265044 ADRB3P13945 408 aa9.17□□□□□ -0.94
SSR3-201ENST00000265044 PREPP48147 710 aa9.17□□□□□ -0.94
SSR3-201ENST00000265044 ACVR1Q04771 509 aa9.17□□□□□ -0.94
SSR3-201ENST00000265044 GTF2H2Q13888 395 aa9.17□□□□□ -0.94
SSR3-201ENST00000265044 MUM1Q2TAK8 710 aa9.17□□□□□ -0.94
SSR3-201ENST00000265044 GTF2H2CQ6P1K8 395 aa9.17□□□□□ -0.94
SSR3-201ENST00000265044 TMEM207Q6UWW9 146 aa9.17□□□□□ -0.94
SSR3-201ENST00000265044 CHST15Q7LFX5 561 aaPredicted RBP9.17□□□□□ -0.94
SSR3-201ENST00000265044 SPATA24Q86W54 205 aa9.17□□□□□ -0.94
SSR3-201ENST00000265044 PHACTR4Q8IZ21 702 aa9.17□□□□□ -0.94
SSR3-201ENST00000265044 RAB42Q8N4Z0 105 aa9.17□□□□□ -0.94
SSR3-201ENST00000265044 RBM15BQ8NDT2 890 aaKnown RBP9.17□□□□□ -0.94
SSR3-201ENST00000265044 RHEBL1Q8TAI7 183 aa9.17□□□□□ -0.94
SSR3-201ENST00000265044 RSPRY1Q96DX4 576 aa9.17□□□□□ -0.94
SSR3-201ENST00000265044 UBXN10Q96LJ8 280 aa9.17□□□□□ -0.94
SSR3-201ENST00000265044 C1QTNF1Q9BXJ1 281 aa9.17□□□□□ -0.94
SSR3-201ENST00000265044 MRGBPQ9NV56 204 aa9.17□□□□□ -0.94
SSR3-201ENST00000265044 NDE1Q9NXR1 346 aa9.17□□□□□ -0.94
SSR3-201ENST00000265044 TMEM98Q9Y2Y6 226 aa9.17□□□□□ -0.94
SSR3-201ENST00000265044 GPSM3Q9Y4H4 160 aa9.17□□□□□ -0.94
SSR3-201ENST00000265044 PTPRDP23468 1912 aa9.17□□□□□ -0.94
SSR3-201ENST00000265044 ANP32DO95626 131 aa9.17□□□□□ -0.94
SSR3-201ENST00000265044 LINC00271P0C7V0 271 aa9.17□□□□□ -0.94
SSR3-201ENST00000265044 PCNAP12004 261 aa9.17□□□□□ -0.94
SSR3-201ENST00000265044 C6P13671 934 aa9.17□□□□□ -0.94
SSR3-201ENST00000265044 CD72P21854 359 aa9.17□□□□□ -0.94
SSR3-201ENST00000265044 PIK3R1P27986 724 aa9.17□□□□□ -0.94
SSR3-201ENST00000265044 KCNC1P48547 511 aa9.17□□□□□ -0.94
SSR3-201ENST00000265044 GALK1P51570 392 aa9.17□□□□□ -0.94
SSR3-201ENST00000265044 THOP1P52888 689 aa9.17□□□□□ -0.94
SSR3-201ENST00000265044 TBL3Q12788 808 aaKnown RBP9.17□□□□□ -0.94
SSR3-201ENST00000265044 PRKG2Q13237 762 aa9.17□□□□□ -0.94
SSR3-201ENST00000265044 CAMK2GQ13555 558 aaPredicted RBP9.17□□□□□ -0.94
SSR3-201ENST00000265044 NAE1Q13564 534 aa9.17□□□□□ -0.94
SSR3-201ENST00000265044 PON2Q15165 354 aa9.17□□□□□ -0.94
SSR3-201ENST00000265044 CTSL3PQ5NE16 218 aa9.17□□□□□ -0.94
SSR3-201ENST00000265044 COL13A1Q5TAT6 717 aaPredicted RBP9.17□□□□□ -0.94
SSR3-201ENST00000265044 LIPIQ6XZB0 460 aa9.17□□□□□ -0.94
SSR3-201ENST00000265044 FRMD7Q6ZUT3 714 aa9.17□□□□□ -0.94
SSR3-201ENST00000265044 UBE2Q1Q7Z7E8 422 aa9.17□□□□□ -0.94
SSR3-201ENST00000265044 CBARPQ8N350 705 aaPredicted RBP9.17□□□□□ -0.94
SSR3-201ENST00000265044 FUBP1Q96AE4 644 aaKnown RBP9.17□□□□□ -0.94
SSR3-201ENST00000265044 RSRC1Q96IZ7 334 aaKnown RBP9.17□□□□□ -0.94
SSR3-201ENST00000265044 PLEKHG4BQ96PX9 1271 aa9.17□□□□□ -0.94
SSR3-201ENST00000265044 SORT1Q99523 831 aa9.17□□□□□ -0.94
SSR3-201ENST00000265044 RPP25Q9BUL9 199 aaKnown RBP9.17□□□□□ -0.94
SSR3-201ENST00000265044 RGSL1A5PLK6 1076 aa9.17□□□□□ -0.94
SSR3-201ENST00000265044 TSPAN6O43657 245 aa9.17□□□□□ -0.94
SSR3-201ENST00000265044 MYO1DO94832 1006 aa9.17□□□□□ -0.94
SSR3-201ENST00000265044 HK2P52789 917 aa9.17□□□□□ -0.94
SSR3-201ENST00000265044 PTPN5P54829 565 aa9.17□□□□□ -0.94
SSR3-201ENST00000265044 ELF3P78545 371 aaPredicted RBP9.17□□□□□ -0.94
SSR3-201ENST00000265044 XIAPP98170 497 aa9.17□□□□□ -0.94
SSR3-201ENST00000265044 TCHHL1Q5QJ38 904 aaPredicted RBP9.17□□□□□ -0.94
SSR3-201ENST00000265044 METTL21CQ5VZV1 264 aa9.17□□□□□ -0.94
SSR3-201ENST00000265044 PHTF2Q8N3S3 785 aa9.17□□□□□ -0.94
SSR3-201ENST00000265044 MAPK15Q8TD08 544 aa9.17□□□□□ -0.94
SSR3-201ENST00000265044 ISL2Q96A47 359 aa9.17□□□□□ -0.94
SSR3-201ENST00000265044 BIRC8Q96P09 236 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms