RNA–Protein interactions for RNA: ENST00000264951.8

XRN1-201, Transcript of 5'-3' exoribonuclease 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene XRN1, Length 10,143 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-201ENST00000264951 CHAC2Q8WUX2 184 aa5.4□□□□□ -1.54
XRN1-201ENST00000264951 ASB9Q96DX5 294 aa5.4□□□□□ -1.54
XRN1-201ENST00000264951 EPYCQ99645 322 aa5.4□□□□□ -1.54
XRN1-201ENST00000264951 USP29Q9HBJ7 922 aa5.4□□□□□ -1.54
XRN1-201ENST00000264951 TSPAN16Q9UKR8 245 aa5.4□□□□□ -1.54
XRN1-201ENST00000264951 PCDHGA11Q9Y5H2 935 aa5.4□□□□□ -1.54
XRN1-201ENST00000264951 LRRN3E7EW58 273 aa5.4□□□□□ -1.54
XRN1-201ENST00000264951 NME6O75414 186 aaPredicted RBP5.4□□□□□ -1.54
XRN1-201ENST00000264951 OAZ2O95190 189 aa5.4□□□□□ -1.54
XRN1-201ENST00000264951 GRK6P43250 576 aa5.4□□□□□ -1.54
XRN1-201ENST00000264951 CYP4F2P78329 520 aa5.4□□□□□ -1.54
XRN1-201ENST00000264951 POU5F1Q01860 360 aaKnown RBP5.4□□□□□ -1.54
XRN1-201ENST00000264951 CYP4F3Q08477 520 aa5.4□□□□□ -1.54
XRN1-201ENST00000264951 PTP4A2Q12974 167 aa5.4□□□□□ -1.54
XRN1-201ENST00000264951 BAATQ14032 418 aaPredicted RBP5.4□□□□□ -1.54
XRN1-201ENST00000264951 TIGD6Q17RP2 521 aa5.4□□□□□ -1.54
XRN1-201ENST00000264951 UPF1Q92900 1129 aaKnown RBP eCLIP5.4□□□□□ -1.54
XRN1-201ENST00000264951 CXorf40BQ96DE9 158 aa5.4□□□□□ -1.54
XRN1-201ENST00000264951 MTMR8Q96EF0 704 aa5.4□□□□□ -1.54
XRN1-201ENST00000264951 ZNF514Q96K75 400 aaPredicted RBP5.4□□□□□ -1.54
XRN1-201ENST00000264951 FUZQ9BT04 418 aa5.4□□□□□ -1.54
XRN1-201ENST00000264951 ZYG11BQ9C0D3 744 aa5.4□□□□□ -1.54
XRN1-201ENST00000264951 LRRN3Q9H3W5 708 aa5.4□□□□□ -1.54
XRN1-201ENST00000264951 ELAC1Q9H777 363 aaKnown RBP5.4□□□□□ -1.54
XRN1-201ENST00000264951 DCDC2CA8MYV0 355 aa5.4□□□□□ -1.55
XRN1-201ENST00000264951 ACKR2O00590 384 aa5.4□□□□□ -1.55
XRN1-201ENST00000264951 MRPS14O60783 128 aaKnown RBP5.4□□□□□ -1.55
XRN1-201ENST00000264951 RCBTB2O95199 551 aa5.4□□□□□ -1.55
XRN1-201ENST00000264951 UGT1A3P35503 534 aa5.4□□□□□ -1.55
XRN1-201ENST00000264951 CEBPAP49715 358 aaPredicted RBP5.4□□□□□ -1.55
XRN1-201ENST00000264951 CCNHP51946 323 aaPredicted RBP5.4□□□□□ -1.55
XRN1-201ENST00000264951 CEBPGP53567 150 aa5.4□□□□□ -1.55
XRN1-201ENST00000264951 CDH13P55290 713 aa5.4□□□□□ -1.55
XRN1-201ENST00000264951 MTM1Q13496 603 aa5.4□□□□□ -1.55
XRN1-201ENST00000264951 GIT2Q14161 759 aa5.4□□□□□ -1.55
XRN1-201ENST00000264951 ZNF423Q2M1K9 1284 aa5.4□□□□□ -1.55
XRN1-201ENST00000264951 C16orf46Q6P387 395 aa5.4□□□□□ -1.55
XRN1-201ENST00000264951 PHF13Q86YI8 300 aaPredicted RBP5.4□□□□□ -1.55
XRN1-201ENST00000264951 PDZD9Q8IXQ8 264 aa5.4□□□□□ -1.55
XRN1-201ENST00000264951 IQCKQ8N0W5 287 aa5.4□□□□□ -1.55
XRN1-201ENST00000264951 ZNF563Q8TA94 476 aa5.4□□□□□ -1.55
XRN1-201ENST00000264951 C5orf34Q96MH7 638 aa5.4□□□□□ -1.55
XRN1-201ENST00000264951 COL21A1Q96P44 957 aa5.4□□□□□ -1.55
XRN1-201ENST00000264951 GFM1Q96RP9 751 aaKnown RBP5.4□□□□□ -1.55
XRN1-201ENST00000264951 EIF2B3Q9NR50 452 aaKnown RBP5.4□□□□□ -1.55
XRN1-201ENST00000264951 CYTH4Q9UIA0 394 aa5.4□□□□□ -1.55
XRN1-201ENST00000264951 CFAP65Q6ZU64 1925 aaKnown RBP5.4□□□□□ -1.55
XRN1-201ENST00000264951 TTC34A8MYJ7 566 aa5.4□□□□□ -1.55
XRN1-201ENST00000264951 MT-CO2P00403 227 aa5.4□□□□□ -1.55
XRN1-201ENST00000264951 ARHGAP12Q8IWW6 846 aa5.4□□□□□ -1.55
XRN1-201ENST00000264951 SEPT12Q8IYM1 358 aa5.4□□□□□ -1.55
XRN1-201ENST00000264951 SCGB1C1Q8TD33 95 aa5.4□□□□□ -1.55
XRN1-201ENST00000264951 PNPLA2Q96AD5 504 aa5.4□□□□□ -1.55
XRN1-201ENST00000264951 BORCS7Q96B45 105 aa5.4□□□□□ -1.55
XRN1-201ENST00000264951 ZBED6CLQ96FA7 236 aaPredicted RBP5.4□□□□□ -1.55
XRN1-201ENST00000264951 BIRC8Q96P09 236 aa5.4□□□□□ -1.55
XRN1-201ENST00000264951 OR10A4Q9H209 315 aa5.4□□□□□ -1.55
XRN1-201ENST00000264951 BIN3Q9NQY0 253 aa5.4□□□□□ -1.55
XRN1-201ENST00000264951 TBC1D14Q9P2M4 693 aa5.4□□□□□ -1.55
XRN1-201ENST00000264951 PADI2Q9Y2J8 665 aa5.4□□□□□ -1.55
XRN1-201ENST00000264951 ST14Q9Y5Y6 855 aa5.4□□□□□ -1.55
XRN1-201ENST00000264951 TRIM64A6NGJ6 449 aa5.4□□□□□ -1.55
XRN1-201ENST00000264951 CSTF2P33240 577 aaKnown RBP eCLIP5.4□□□□□ -1.55
XRN1-201ENST00000264951 CRISP1P54107 249 aa5.4□□□□□ -1.55
XRN1-201ENST00000264951 DSG2Q14126 1118 aa5.4□□□□□ -1.55
XRN1-201ENST00000264951 C3orf33Q6P1S2 294 aa5.4□□□□□ -1.55
XRN1-201ENST00000264951 TPGS1Q6ZTW0 290 aa5.4□□□□□ -1.55
XRN1-201ENST00000264951 NCCRP1Q6ZVX7 275 aaPredicted RBP5.4□□□□□ -1.55
XRN1-201ENST00000264951 KCTD8Q6ZWB6 473 aa5.4□□□□□ -1.55
XRN1-201ENST00000264951 LINGO2Q7L985 606 aa5.4□□□□□ -1.55
XRN1-201ENST00000264951 NAT16Q8N8M0 369 aa5.4□□□□□ -1.55
XRN1-201ENST00000264951 SUSD6Q92537 303 aa5.4□□□□□ -1.55
XRN1-201ENST00000264951 ELMO3Q96BJ8 720 aa5.4□□□□□ -1.55
XRN1-201ENST00000264951 MFSD14AQ96MC6 490 aa5.4□□□□□ -1.55
XRN1-201ENST00000264951 NDC1Q9BTX1 674 aa5.4□□□□□ -1.55
XRN1-201ENST00000264951 ZNF717Q9BY31 904 aaPredicted RBP5.4□□□□□ -1.55
XRN1-201ENST00000264951 RPH3AQ9Y2J0 694 aaPredicted RBP5.4□□□□□ -1.55
XRN1-201ENST00000264951 A0A0J9YVX5 310 aa5.4□□□□□ -1.55
XRN1-201ENST00000264951 CAPN8A6NHC0 703 aa5.4□□□□□ -1.55
XRN1-201ENST00000264951 SLITRK5O94991 958 aa5.4□□□□□ -1.55
XRN1-201ENST00000264951 IFNA5P01569 189 aa5.4□□□□□ -1.55
XRN1-201ENST00000264951 PRDX5P30044 214 aa5.4□□□□□ -1.55
XRN1-201ENST00000264951 NDST1P52848 882 aa5.4□□□□□ -1.55
XRN1-201ENST00000264951 ZNF800Q2TB10 664 aaPredicted RBP eCLIP5.4□□□□□ -1.55
XRN1-201ENST00000264951 TPRG1LQ5T0D9 272 aa5.4□□□□□ -1.55
XRN1-201ENST00000264951 SLC27A1Q6PCB7 646 aa5.4□□□□□ -1.55
XRN1-201ENST00000264951 TRAPPC5Q8IUR0 188 aa5.4□□□□□ -1.55
XRN1-201ENST00000264951 CCDC24Q8N4L8 307 aa5.4□□□□□ -1.55
XRN1-201ENST00000264951 EFCAB3Q8N7B9 438 aa5.4□□□□□ -1.55
XRN1-201ENST00000264951 ZNF565Q8N9K5 539 aa5.4□□□□□ -1.55
XRN1-201ENST00000264951 VANGL1Q8TAA9 524 aaPredicted RBP5.4□□□□□ -1.55
XRN1-201ENST00000264951 SLC44A1Q8WWI5 657 aa5.4□□□□□ -1.55
XRN1-201ENST00000264951 ISCA1Q9BUE6 129 aa5.4□□□□□ -1.55
XRN1-201ENST00000264951 DCSTAMPQ9H295 470 aa5.4□□□□□ -1.55
XRN1-201ENST00000264951 CPNE5Q9HCH3 593 aa5.4□□□□□ -1.55
XRN1-201ENST00000264951 FBXL21Q9UKT6 434 aa5.4□□□□□ -1.55
XRN1-201ENST00000264951 SPIN1Q9Y657 262 aaPredicted RBP5.4□□□□□ -1.55
XRN1-201ENST00000264951 TRIM64BA6NI03 449 aa5.39□□□□□ -1.55
XRN1-201ENST00000264951 TBX1O43435 398 aa5.39□□□□□ -1.55
XRN1-201ENST00000264951 HOXD8P13378 290 aaPredicted RBP5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms