RNA–Protein interactions for RNA: ENST00000264555.9

PHRF1-201, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,523 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-201ENST00000264555 LDLRAP1Q5SW96 308 aa16.51■□□□□ 0.23
PHRF1-201ENST00000264555 DPP10Q8N608 796 aa16.51■□□□□ 0.23
PHRF1-201ENST00000264555 CENPIQ92674 756 aaPredicted RBP16.51■□□□□ 0.23
PHRF1-201ENST00000264555 SKA1Q96BD8 255 aa16.51■□□□□ 0.23
PHRF1-201ENST00000264555 FCRL3Q96P31 734 aaPredicted RBP16.51■□□□□ 0.23
PHRF1-201ENST00000264555 WRAP53Q9BUR4 548 aaKnown RBP16.51■□□□□ 0.23
PHRF1-201ENST00000264555 SUCOQ9UBS9 1254 aaKnown RBP16.51■□□□□ 0.23
PHRF1-201ENST00000264555 A0A1W2PRU2 124 aa16.51■□□□□ 0.23
PHRF1-201ENST00000264555 FAM149AA5PLN7 773 aa16.51■□□□□ 0.23
PHRF1-201ENST00000264555 IQCF5A8MTL0 148 aa16.51■□□□□ 0.23
PHRF1-201ENST00000264555 BHMG1C9JSJ3 638 aaPredicted RBP16.51■□□□□ 0.23
PHRF1-201ENST00000264555 STC1P52823 247 aa16.51■□□□□ 0.23
PHRF1-201ENST00000264555 AQP4P55087 323 aa16.51■□□□□ 0.23
PHRF1-201ENST00000264555 MOGSQ13724 837 aa16.51■□□□□ 0.23
PHRF1-201ENST00000264555 PLEKHG4Q58EX7 1191 aa16.51■□□□□ 0.23
PHRF1-201ENST00000264555 GPR107Q5VW38 600 aa16.51■□□□□ 0.23
PHRF1-201ENST00000264555 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16.51■□□□□ 0.23
PHRF1-201ENST00000264555 C16orf62Q7Z3J2 963 aa16.51■□□□□ 0.23
PHRF1-201ENST00000264555 DNAJB8Q8NHS0 232 aa16.51■□□□□ 0.23
PHRF1-201ENST00000264555 TMEM40Q8WWA1 233 aa16.51■□□□□ 0.23
PHRF1-201ENST00000264555 OVCA2Q8WZ82 227 aa16.51■□□□□ 0.23
PHRF1-201ENST00000264555 ASB9Q96DX5 294 aa16.51■□□□□ 0.23
PHRF1-201ENST00000264555 IMP3Q9NV31 184 aaKnown RBP16.51■□□□□ 0.23
PHRF1-201ENST00000264555 U3KQV3 271 aa16.51■□□□□ 0.23
PHRF1-201ENST00000264555 TALDO1P37837 337 aa16.5■□□□□ 0.23
PHRF1-201ENST00000264555 CAPZA2P47755 286 aa16.5■□□□□ 0.23
PHRF1-201ENST00000264555 LYSMD3Q7Z3D4 306 aa16.5■□□□□ 0.23
PHRF1-201ENST00000264555 PIM3Q86V86 326 aa16.5■□□□□ 0.23
PHRF1-201ENST00000264555 UMODL1-AS1Q8N2C9 162 aa16.5■□□□□ 0.23
PHRF1-201ENST00000264555 DENND1AQ8TEH3 1009 aa16.5■□□□□ 0.23
PHRF1-201ENST00000264555 NWD2Q9ULI1 1742 aa16.5■□□□□ 0.23
PHRF1-201ENST00000264555 ZW10O43264 779 aa16.5■□□□□ 0.23
PHRF1-201ENST00000264555 ALDOAP04075 364 aaKnown RBP16.5■□□□□ 0.23
PHRF1-201ENST00000264555 EPHX1P07099 455 aa16.5■□□□□ 0.23
PHRF1-201ENST00000264555 PLA2G4EQ3MJ16 856 aa16.5■□□□□ 0.23
PHRF1-201ENST00000264555 LIN52Q52LA3 116 aa16.5■□□□□ 0.23
PHRF1-201ENST00000264555 SPANXN2Q5MJ10 180 aa16.5■□□□□ 0.23
PHRF1-201ENST00000264555 CCNYL2Q5T2Q4 361 aa16.5■□□□□ 0.23
PHRF1-201ENST00000264555 EPHX4Q8IUS5 362 aa16.5■□□□□ 0.23
PHRF1-201ENST00000264555 CYP2S1Q96SQ9 504 aa16.5■□□□□ 0.23
PHRF1-201ENST00000264555 ZDHHC3Q9NYG2 299 aa16.5■□□□□ 0.23
PHRF1-201ENST00000264555 KCTD3Q9Y597 815 aa16.5■□□□□ 0.23
PHRF1-201ENST00000264555 ABHD14A-ACY1A0A1B0GW23 586 aa16.5■□□□□ 0.23
PHRF1-201ENST00000264555 EFCAB10A6NFE3 127 aa16.5■□□□□ 0.23
PHRF1-201ENST00000264555 TMEM233B4DJY2 109 aa16.5■□□□□ 0.23
PHRF1-201ENST00000264555 MATN2O00339 956 aa16.5■□□□□ 0.23
PHRF1-201ENST00000264555 CCNDBP1O95273 360 aa16.5■□□□□ 0.23
PHRF1-201ENST00000264555 RAB6CQ53S08 254 aa16.5■□□□□ 0.23
PHRF1-201ENST00000264555 ARMC3Q5W041 872 aa16.5■□□□□ 0.23
PHRF1-201ENST00000264555 FRMD7Q6ZUT3 714 aa16.5■□□□□ 0.23
PHRF1-201ENST00000264555 TRIB2Q92519 343 aa16.5■□□□□ 0.23
PHRF1-201ENST00000264555 RAB6CQ9H0N0 254 aa16.5■□□□□ 0.23
PHRF1-201ENST00000264555 DPPA5A6NC42 116 aa16.5■□□□□ 0.23
PHRF1-201ENST00000264555 PRKCGP05129 697 aa16.5■□□□□ 0.23
PHRF1-201ENST00000264555 ALPIP09923 528 aa16.5■□□□□ 0.23
PHRF1-201ENST00000264555 CCNA2P20248 432 aa16.5■□□□□ 0.23
PHRF1-201ENST00000264555 KELP23276 732 aa16.5■□□□□ 0.23
PHRF1-201ENST00000264555 PSMD8P48556 350 aa16.5■□□□□ 0.23
PHRF1-201ENST00000264555 DNAJB13P59910 316 aa16.5■□□□□ 0.23
PHRF1-201ENST00000264555 STEAP4Q687X5 459 aa16.5■□□□□ 0.23
PHRF1-201ENST00000264555 TXNDC8Q6A555 127 aa16.5■□□□□ 0.23
PHRF1-201ENST00000264555 PAWRQ96IZ0 340 aaKnown RBP16.5■□□□□ 0.23
PHRF1-201ENST00000264555 DERL2Q9GZP9 239 aa16.5■□□□□ 0.23
PHRF1-201ENST00000264555 IFT80Q9P2H3 777 aaPredicted RBP16.5■□□□□ 0.23
PHRF1-201ENST00000264555 PTGESO14684 152 aa16.5■□□□□ 0.23
PHRF1-201ENST00000264555 EDN1P05305 212 aa16.5■□□□□ 0.23
PHRF1-201ENST00000264555 SSR2P43308 183 aa16.5■□□□□ 0.23
PHRF1-201ENST00000264555 RPS14P62263 151 aaKnown RBP16.5■□□□□ 0.23
PHRF1-201ENST00000264555 RING1Q06587 406 aa16.5■□□□□ 0.23
PHRF1-201ENST00000264555 DLG1Q12959 904 aa16.5■□□□□ 0.23
PHRF1-201ENST00000264555 THAP5Q7Z6K1 395 aa16.5■□□□□ 0.23
PHRF1-201ENST00000264555 PLD6Q8N2A8 252 aaKnown RBP16.5■□□□□ 0.23
PHRF1-201ENST00000264555 OR10T2Q8NGX3 314 aa16.5■□□□□ 0.23
PHRF1-201ENST00000264555 EBF3Q9H4W6 596 aa16.5■□□□□ 0.23
PHRF1-201ENST00000264555 CCDC177Q9NQR7 707 aaPredicted RBP16.5■□□□□ 0.23
PHRF1-201ENST00000264555 PCDHGA11Q9Y5H2 935 aa16.5■□□□□ 0.23
PHRF1-201ENST00000264555 LINC00854A0A1B0GVQ3 168 aa16.49■□□□□ 0.23
PHRF1-201ENST00000264555 MBLAC1A4D2B0 266 aaPredicted RBP16.49■□□□□ 0.23
PHRF1-201ENST00000264555 UGT1A6P19224 532 aa16.49■□□□□ 0.23
PHRF1-201ENST00000264555 UGT1A1P22309 533 aa16.49■□□□□ 0.23
PHRF1-201ENST00000264555 UGT1A4P22310 534 aa16.49■□□□□ 0.23
PHRF1-201ENST00000264555 UGT1A3P35503 534 aa16.49■□□□□ 0.23
PHRF1-201ENST00000264555 UGT1A5P35504 534 aa16.49■□□□□ 0.23
PHRF1-201ENST00000264555 FAM174BQ3ZCQ3 159 aa16.49■□□□□ 0.23
PHRF1-201ENST00000264555 RNF220Q5VTB9 566 aa16.49■□□□□ 0.23
PHRF1-201ENST00000264555 TMEM220Q6QAJ8 160 aa16.49■□□□□ 0.23
PHRF1-201ENST00000264555 PHTF2Q8N3S3 785 aa16.49■□□□□ 0.23
PHRF1-201ENST00000264555 OR2AP1Q8NGE2 309 aa16.49■□□□□ 0.23
PHRF1-201ENST00000264555 ING5Q8WYH8 240 aa16.49■□□□□ 0.23
PHRF1-201ENST00000264555 H3BNX3 289 aa16.49■□□□□ 0.23
PHRF1-201ENST00000264555 THRBP10828 461 aa16.49■□□□□ 0.23
PHRF1-201ENST00000264555 SLC7A1P30825 629 aa16.49■□□□□ 0.23
PHRF1-201ENST00000264555 UGT2B15P54855 530 aa16.49■□□□□ 0.23
PHRF1-201ENST00000264555 ECT2LQ008S8 904 aa16.49■□□□□ 0.23
PHRF1-201ENST00000264555 ALFQ53S48 1182 aa16.49■□□□□ 0.23
PHRF1-201ENST00000264555 PITRM1Q5JRX3 1037 aa16.49■□□□□ 0.23
PHRF1-201ENST00000264555 ARHGAP22Q7Z5H3 698 aa16.49■□□□□ 0.23
PHRF1-201ENST00000264555 TMEM135Q86UB9 458 aa16.49■□□□□ 0.23
PHRF1-201ENST00000264555 OR10A6Q8NH74 314 aa16.49■□□□□ 0.23
PHRF1-201ENST00000264555 LCHNA4D1U4 455 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms