RNA–Protein interactions for RNA: ENST00000261726.10

CUX2-201, Transcript of cut like homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUX2, Length 6,844 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2-201ENST00000261726 ANKFN1Q8N957 763 aa14.13□□□□□ -0.15
CUX2-201ENST00000261726 DEC1Q9P2X7 70 aa14.13□□□□□ -0.15
CUX2-201ENST00000261726 CAPN8A6NHC0 703 aa14.13□□□□□ -0.15
CUX2-201ENST00000261726 A8MUI8 341 aa14.13□□□□□ -0.15
CUX2-201ENST00000261726 TSPAN4O14817 238 aa14.13□□□□□ -0.15
CUX2-201ENST00000261726 BPGMP07738 259 aa14.13□□□□□ -0.15
CUX2-201ENST00000261726 ZNF234Q14588 700 aa14.13□□□□□ -0.15
CUX2-201ENST00000261726 ABCA11PQ4W5N1 156 aa14.13□□□□□ -0.15
CUX2-201ENST00000261726 C1orf189Q5VU69 101 aa14.13□□□□□ -0.15
CUX2-201ENST00000261726 IL23RQ5VWK5 629 aa14.13□□□□□ -0.15
CUX2-201ENST00000261726 MED27Q6P2C8 311 aa14.13□□□□□ -0.15
CUX2-201ENST00000261726 ZNF627Q7L945 461 aa14.13□□□□□ -0.15
CUX2-201ENST00000261726 OR4C6Q8NH72 309 aa14.13□□□□□ -0.15
CUX2-201ENST00000261726 DGCR14Q96DF8 476 aaKnown RBP14.13□□□□□ -0.15
CUX2-201ENST00000261726 IPPKQ9H8X2 491 aa14.13□□□□□ -0.15
CUX2-201ENST00000261726 ZNF639Q9UID6 485 aa14.13□□□□□ -0.15
CUX2-201ENST00000261726 MAT2AP31153 395 aaKnown RBP14.13□□□□□ -0.15
CUX2-201ENST00000261726 ASMTP46597 345 aa14.13□□□□□ -0.15
CUX2-201ENST00000261726 CDH4P55283 916 aa14.13□□□□□ -0.15
CUX2-201ENST00000261726 ADAM8P78325 824 aa14.13□□□□□ -0.15
CUX2-201ENST00000261726 GTF2H2Q13888 395 aa14.13□□□□□ -0.15
CUX2-201ENST00000261726 ZDHHC20Q5W0Z9 365 aa14.13□□□□□ -0.15
CUX2-201ENST00000261726 GTF2H2CQ6P1K8 395 aa14.13□□□□□ -0.15
CUX2-201ENST00000261726 RBM18Q96H35 190 aaKnown RBP14.13□□□□□ -0.15
CUX2-201ENST00000261726 UPB1Q9UBR1 384 aa14.13□□□□□ -0.15
CUX2-201ENST00000261726 C5orf51A6NDU8 294 aa14.13□□□□□ -0.15
CUX2-201ENST00000261726 IPO13O94829 963 aaKnown RBP14.13□□□□□ -0.15
CUX2-201ENST00000261726 PKMP14618 531 aaKnown RBP14.13□□□□□ -0.15
CUX2-201ENST00000261726 MAN2A2P49641 1150 aa14.13□□□□□ -0.15
CUX2-201ENST00000261726 C9orf57Q5W0N0 161 aa14.13□□□□□ -0.15
CUX2-201ENST00000261726 RANBP3LQ86VV4 465 aaPredicted RBP14.13□□□□□ -0.15
CUX2-201ENST00000261726 JOSD2Q8TAC2 188 aa14.13□□□□□ -0.15
CUX2-201ENST00000261726 SLC38A4Q969I6 547 aa14.13□□□□□ -0.15
CUX2-201ENST00000261726 ARMC5Q96C12 935 aa14.13□□□□□ -0.15
CUX2-201ENST00000261726 HTATIP2Q9BUP3 242 aa14.13□□□□□ -0.15
CUX2-201ENST00000261726 FAM105AQ9NUU6 356 aa14.13□□□□□ -0.15
CUX2-201ENST00000261726 PCDHB1Q9Y5F3 818 aa14.13□□□□□ -0.15
CUX2-201ENST00000261726 PTCH2Q9Y6C5 1203 aa14.13□□□□□ -0.15
CUX2-201ENST00000261726 XRN1Q8IZH2 1706 aaKnown RBP14.13□□□□□ -0.15
CUX2-201ENST00000261726 ANGPTL1O95841 491 aa14.13□□□□□ -0.15
CUX2-201ENST00000261726 RB1P06400 928 aa14.13□□□□□ -0.15
CUX2-201ENST00000261726 ERVK-21P61565 698 aa14.13□□□□□ -0.15
CUX2-201ENST00000261726 CA9Q16790 459 aa14.13□□□□□ -0.15
CUX2-201ENST00000261726 AAGABQ6PD74 315 aa14.13□□□□□ -0.15
CUX2-201ENST00000261726 MON1AQ86VX9 555 aa14.13□□□□□ -0.15
CUX2-201ENST00000261726 AIFM2Q9BRQ8 373 aa14.13□□□□□ -0.15
CUX2-201ENST00000261726 RHOJQ9H4E5 214 aa14.13□□□□□ -0.15
CUX2-201ENST00000261726 PCDH18Q9HCL0 1135 aa14.13□□□□□ -0.15
CUX2-201ENST00000261726 S100A14Q9HCY8 104 aa14.13□□□□□ -0.15
CUX2-201ENST00000261726 NME6O75414 186 aaPredicted RBP14.12□□□□□ -0.15
CUX2-201ENST00000261726 TNFRSF8P28908 595 aa14.12□□□□□ -0.15
CUX2-201ENST00000261726 SLC25A52Q3SY17 297 aa14.12□□□□□ -0.15
CUX2-201ENST00000261726 ARSJQ5FYB0 599 aaPredicted RBP14.12□□□□□ -0.15
CUX2-201ENST00000261726 BRMS1LQ5PSV4 323 aa14.12□□□□□ -0.15
CUX2-201ENST00000261726 PPP1R14BQ96C90 147 aa14.12□□□□□ -0.15
CUX2-201ENST00000261726 GAS2L1Q99501 681 aaPredicted RBP14.12□□□□□ -0.15
CUX2-201ENST00000261726 WDR18Q9BV38 432 aa14.12□□□□□ -0.15
CUX2-201ENST00000261726 PRMT5O14744 637 aaPredicted RBP14.12□□□□□ -0.15
CUX2-201ENST00000261726 PITRM1Q5JRX3 1037 aa14.12□□□□□ -0.15
CUX2-201ENST00000261726 BBS12Q6ZW61 710 aa14.12□□□□□ -0.15
CUX2-201ENST00000261726 HBEGFQ99075 208 aa14.12□□□□□ -0.15
CUX2-201ENST00000261726 ABI3Q9P2A4 366 aa14.12□□□□□ -0.15
CUX2-201ENST00000261726 PSMD10O75832 226 aa14.12□□□□□ -0.15
CUX2-201ENST00000261726 RPIAP49247 311 aa14.12□□□□□ -0.15
CUX2-201ENST00000261726 MPP1Q00013 466 aa14.12□□□□□ -0.15
CUX2-201ENST00000261726 CACNG1Q06432 222 aa14.12□□□□□ -0.15
CUX2-201ENST00000261726 MAPK14Q16539 360 aa14.12□□□□□ -0.15
CUX2-201ENST00000261726 FRMD7Q6ZUT3 714 aa14.12□□□□□ -0.15
CUX2-201ENST00000261726 OR8H3Q8N146 312 aa14.12□□□□□ -0.15
CUX2-201ENST00000261726 FAM84AQ96KN4 292 aa14.12□□□□□ -0.15
CUX2-201ENST00000261726 DMRTB1Q96MA1 342 aa14.12□□□□□ -0.15
CUX2-201ENST00000261726 KXD1Q9BQD3 176 aa14.12□□□□□ -0.15
CUX2-201ENST00000261726 FUCA2Q9BTY2 467 aa14.12□□□□□ -0.15
CUX2-201ENST00000261726 B3GNT4Q9C0J1 378 aa14.12□□□□□ -0.15
CUX2-201ENST00000261726 PDPK1O15530 556 aa14.12□□□□□ -0.15
CUX2-201ENST00000261726 CCNB2O95067 398 aa14.12□□□□□ -0.15
CUX2-201ENST00000261726 ALDH4A1P30038 563 aa14.12□□□□□ -0.15
CUX2-201ENST00000261726 GRK6P43250 576 aa14.12□□□□□ -0.15
CUX2-201ENST00000261726 GRSF1Q12849 480 aaKnown RBP eCLIP14.12□□□□□ -0.15
CUX2-201ENST00000261726 VWA5B1Q5TIE3 1220 aa14.12□□□□□ -0.15
CUX2-201ENST00000261726 USP30Q70CQ3 517 aa14.12□□□□□ -0.15
CUX2-201ENST00000261726 GPALPP1Q8IXQ4 340 aa14.12□□□□□ -0.15
CUX2-201ENST00000261726 TCF7L1Q9HCS4 588 aa14.12□□□□□ -0.15
CUX2-201ENST00000261726 CCL22O00626 93 aa14.12□□□□□ -0.15
CUX2-201ENST00000261726 LGR5O75473 907 aa14.12□□□□□ -0.15
CUX2-201ENST00000261726 MAGEA2P43356 314 aa14.12□□□□□ -0.15
CUX2-201ENST00000261726 CLCN7P51798 805 aa14.12□□□□□ -0.15
CUX2-201ENST00000261726 KLF10Q13118 480 aa14.12□□□□□ -0.15
CUX2-201ENST00000261726 PPM1JQ5JR12 505 aa14.12□□□□□ -0.15
CUX2-201ENST00000261726 USP50Q70EL3 339 aaPredicted RBP14.12□□□□□ -0.15
CUX2-201ENST00000261726 NUP54Q7Z3B4 507 aa14.12□□□□□ -0.15
CUX2-201ENST00000261726 CIR1Q86X95 450 aaPredicted RBP14.12□□□□□ -0.15
CUX2-201ENST00000261726 SLC9A9Q8IVB4 645 aa14.12□□□□□ -0.15
CUX2-201ENST00000261726 LCN9Q8WX39 176 aa14.12□□□□□ -0.15
CUX2-201ENST00000261726 KCTD15Q96SI1 283 aaPredicted RBP14.12□□□□□ -0.15
CUX2-201ENST00000261726 E9PAM4 449 aa14.12□□□□□ -0.15
CUX2-201ENST00000261726 IRF6O14896 467 aa14.12□□□□□ -0.15
CUX2-201ENST00000261726 CLDN11O75508 207 aa14.12□□□□□ -0.15
CUX2-201ENST00000261726 OGNP20774 298 aaKnown RBP14.12□□□□□ -0.15
CUX2-201ENST00000261726 ADAM17P78536 824 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms