RNA–Protein interactions for RNA: ENST00000260563.4

RTCA-201, Transcript of RNA 3'-terminal phosphate cyclase, humanhuman

TSL 1 (best) BASIC

Gene RTCA, Length 1,534 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCA-201ENST00000260563 TMEM9BQ9NQ34 198 aa20.37■□□□□ 0.85
RTCA-201ENST00000260563 SPASTQ9UBP0 616 aa20.37■□□□□ 0.85
RTCA-201ENST00000260563 PCYT1BQ9Y5K3 369 aaPredicted RBP20.37■□□□□ 0.85
RTCA-201ENST00000260563 A0A1W2PPM1 405 aa20.37■□□□□ 0.85
RTCA-201ENST00000260563 OR1I1O60431 355 aa20.37■□□□□ 0.85
RTCA-201ENST00000260563 PIAS2O75928 621 aa20.37■□□□□ 0.85
RTCA-201ENST00000260563 MT-ND3P03897 115 aa20.37■□□□□ 0.85
RTCA-201ENST00000260563 CTSCP53634 463 aa20.37■□□□□ 0.85
RTCA-201ENST00000260563 ADARP55265 1226 aaKnown RBP20.37■□□□□ 0.85
RTCA-201ENST00000260563 MAGOHP61326 146 aaKnown RBP20.37■□□□□ 0.85
RTCA-201ENST00000260563 SHBQ15464 509 aa20.37■□□□□ 0.85
RTCA-201ENST00000260563 PLA2G4EQ3MJ16 856 aa20.37■□□□□ 0.85
RTCA-201ENST00000260563 PRRT3Q5FWE3 981 aa20.37■□□□□ 0.85
RTCA-201ENST00000260563 TMEM220Q6QAJ8 160 aa20.37■□□□□ 0.85
RTCA-201ENST00000260563 TIFABQ6ZNK6 161 aa20.37■□□□□ 0.85
RTCA-201ENST00000260563 EXOC3L1Q86VI1 746 aa20.37■□□□□ 0.85
RTCA-201ENST00000260563 SRRM1Q8IYB3 904 aaKnown RBP20.37■□□□□ 0.85
RTCA-201ENST00000260563 ZNF548Q8NEK5 533 aaPredicted RBP20.37■□□□□ 0.85
RTCA-201ENST00000260563 SGF29Q96ES7 293 aa20.37■□□□□ 0.85
RTCA-201ENST00000260563 NDNQ99608 321 aa20.37■□□□□ 0.85
RTCA-201ENST00000260563 CLPBQ9H078 707 aa20.37■□□□□ 0.85
RTCA-201ENST00000260563 CAAP1Q9H8G2 361 aa20.37■□□□□ 0.85
RTCA-201ENST00000260563 RXFP3Q9NSD7 469 aa20.37■□□□□ 0.85
RTCA-201ENST00000260563 TRNAU1APQ9NX07 287 aaKnown RBP20.37■□□□□ 0.85
RTCA-201ENST00000260563 FAM53CQ9NYF3 392 aa20.37■□□□□ 0.85
RTCA-201ENST00000260563 SENP1Q9P0U3 644 aa20.37■□□□□ 0.85
RTCA-201ENST00000260563 GPR34Q9UPC5 381 aa20.37■□□□□ 0.85
RTCA-201ENST00000260563 PRKAB1Q9Y478 270 aa20.37■□□□□ 0.85
RTCA-201ENST00000260563 CABIN1Q9Y6J0 2220 aa20.36■□□□□ 0.85
RTCA-201ENST00000260563 WDR87Q6ZQQ6 2873 aa20.36■□□□□ 0.85
RTCA-201ENST00000260563 ZFHX2Q9C0A1 2572 aaPredicted RBP20.36■□□□□ 0.85
RTCA-201ENST00000260563 QSOX1O00391 747 aa20.36■□□□□ 0.85
RTCA-201ENST00000260563 KMOO15229 486 aa20.36■□□□□ 0.85
RTCA-201ENST00000260563 AP2A2O94973 939 aa20.36■□□□□ 0.85
RTCA-201ENST00000260563 FMO4P31512 558 aa20.36■□□□□ 0.85
RTCA-201ENST00000260563 PRLHRP49683 370 aa20.36■□□□□ 0.85
RTCA-201ENST00000260563 ELOCQ15369 112 aa20.36■□□□□ 0.85
RTCA-201ENST00000260563 TCEA2Q15560 299 aa20.36■□□□□ 0.85
RTCA-201ENST00000260563 BCL7AQ4VC05 210 aa20.36■□□□□ 0.85
RTCA-201ENST00000260563 RBM20Q5T481 1227 aaKnown RBP20.36■□□□□ 0.85
RTCA-201ENST00000260563 CHST15Q7LFX5 561 aaPredicted RBP20.36■□□□□ 0.85
RTCA-201ENST00000260563 FSTL5Q8N475 847 aaPredicted RBP20.36■□□□□ 0.85
RTCA-201ENST00000260563 ACVR1CQ8NER5 493 aa20.36■□□□□ 0.85
RTCA-201ENST00000260563 LMX1AQ8TE12 382 aa20.36■□□□□ 0.85
RTCA-201ENST00000260563 NAT14Q8WUY8 206 aa20.36■□□□□ 0.85
RTCA-201ENST00000260563 ISL2Q96A47 359 aa20.36■□□□□ 0.85
RTCA-201ENST00000260563 ELMO2Q96JJ3 720 aa20.36■□□□□ 0.85
RTCA-201ENST00000260563 TMEM168Q9H0V1 697 aa20.36■□□□□ 0.85
RTCA-201ENST00000260563 TM7SF3Q9NS93 570 aa20.36■□□□□ 0.85
RTCA-201ENST00000260563 DNAAF2Q9NVR5 837 aaKnown RBP20.36■□□□□ 0.85
RTCA-201ENST00000260563 SLC39A10Q9ULF5 831 aa20.36■□□□□ 0.85
RTCA-201ENST00000260563 ACTL7BQ9Y614 415 aa20.36■□□□□ 0.85
RTCA-201ENST00000260563 EP300Q09472 2414 aaPredicted RBP20.36■□□□□ 0.85
RTCA-201ENST00000260563 F8W8V4 182 aa20.35■□□□□ 0.85
RTCA-201ENST00000260563 PRMT5O14744 637 aaPredicted RBP20.35■□□□□ 0.85
RTCA-201ENST00000260563 TPP1O14773 563 aa20.35■□□□□ 0.85
RTCA-201ENST00000260563 AQP9O43315 295 aa20.35■□□□□ 0.85
RTCA-201ENST00000260563 RFPL1O75677 317 aa20.35■□□□□ 0.85
RTCA-201ENST00000260563 ALDOAP04075 364 aaKnown RBP20.35■□□□□ 0.85
RTCA-201ENST00000260563 ZNF883P0CG24 379 aa20.35■□□□□ 0.85
RTCA-201ENST00000260563 ACP5P13686 325 aa20.35■□□□□ 0.85
RTCA-201ENST00000260563 RPS3P23396 243 aaKnown RBP eCLIP20.35■□□□□ 0.855e-7■□□□□ 10.4
RTCA-201ENST00000260563 SERPINB8P50452 374 aa20.35■□□□□ 0.85
RTCA-201ENST00000260563 ILF3Q12906 894 aaKnown RBP eCLIP20.35■□□□□ 0.85
RTCA-201ENST00000260563 BNIP3Q12983 259 aa20.35■□□□□ 0.85
RTCA-201ENST00000260563 LRP8Q14114 963 aa20.35■□□□□ 0.85
RTCA-201ENST00000260563 USP10Q14694 798 aaKnown RBP20.35■□□□□ 0.85
RTCA-201ENST00000260563 INSCQ1MX18 579 aa20.35■□□□□ 0.85
RTCA-201ENST00000260563 HECTD2Q5U5R9 776 aa20.35■□□□□ 0.85
RTCA-201ENST00000260563 FAM45BPQ6NSW5 357 aa20.35■□□□□ 0.85
RTCA-201ENST00000260563 ZNF549Q6P9A3 640 aa20.35■□□□□ 0.85
RTCA-201ENST00000260563 ZNF547Q8IVP9 402 aa20.35■□□□□ 0.85
RTCA-201ENST00000260563 CLDN19Q8N6F1 224 aa20.35■□□□□ 0.85
RTCA-201ENST00000260563 FAM45AQ8TCE6 357 aa20.35■□□□□ 0.85
RTCA-201ENST00000260563 BIRC8Q96P09 236 aa20.35■□□□□ 0.85
RTCA-201ENST00000260563 P2RY12Q9H244 342 aa20.35■□□□□ 0.85
RTCA-201ENST00000260563 CCDC68Q9H2F9 335 aa20.35■□□□□ 0.85
RTCA-201ENST00000260563 CAB39LQ9H9S4 337 aa20.35■□□□□ 0.85
RTCA-201ENST00000260563 GNPTGQ9UJJ9 305 aa20.35■□□□□ 0.85
RTCA-201ENST00000260563 PRSS21Q9Y6M0 314 aa20.35■□□□□ 0.85
RTCA-201ENST00000260563 ARHGEF17Q96PE2 2063 aaPredicted RBP20.34■□□□□ 0.85
RTCA-201ENST00000260563 CDX4O14627 284 aaPredicted RBP20.34■□□□□ 0.85
RTCA-201ENST00000260563 ESR1P03372 595 aa20.34■□□□□ 0.85
RTCA-201ENST00000260563 OR56A5P0C7T3 313 aa20.34■□□□□ 0.85
RTCA-201ENST00000260563 SAT1P21673 171 aa20.34■□□□□ 0.85
RTCA-201ENST00000260563 DGKAP23743 735 aa20.34■□□□□ 0.85
RTCA-201ENST00000260563 POU4F1Q01851 419 aa20.34■□□□□ 0.85
RTCA-201ENST00000260563 C1orf61Q13536 156 aa20.34■□□□□ 0.85
RTCA-201ENST00000260563 BEND7Q8N7W2 519 aaPredicted RBP20.34■□□□□ 0.85
RTCA-201ENST00000260563 TIMM29Q9BSF4 260 aa20.34■□□□□ 0.85
RTCA-201ENST00000260563 AARSD1Q9BTE6 412 aaKnown RBP20.34■□□□□ 0.85
RTCA-201ENST00000260563 GSDMCQ9BYG8 508 aa20.34■□□□□ 0.85
RTCA-201ENST00000260563 SNX15Q9NRS6 342 aa20.34■□□□□ 0.85
RTCA-201ENST00000260563 VWA7Q9Y334 891 aa20.34■□□□□ 0.85
RTCA-201ENST00000260563 PCDHB1Q9Y5F3 818 aa20.34■□□□□ 0.85
RTCA-201ENST00000260563 COMMD10Q9Y6G5 202 aa20.34■□□□□ 0.85
RTCA-201ENST00000260563 FAM186AA6NE01 2351 aa20.34■□□□□ 0.85
RTCA-201ENST00000260563 SGTAO43765 313 aa20.33■□□□□ 0.85
RTCA-201ENST00000260563 CELA2BP08218 269 aaPredicted RBP20.33■□□□□ 0.85
RTCA-201ENST00000260563 PKMP14618 531 aaKnown RBP20.33■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms