RNA–Protein interactions for RNA: ENST00000259043.11

TRA2B-201, Transcript of transformer 2 beta homolog, humanhuman

TSL 3

Gene TRA2B, Length 943 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-201ENST00000259043 TSPYL4Q9UJ04 414 aa4.8□□□□□ -1.64
TRA2B-201ENST00000259043 NUDCQ9Y266 331 aa4.8□□□□□ -1.64
TRA2B-201ENST00000259043 DDX52Q9Y2R4 599 aaKnown RBP eCLIP4.8□□□□□ -1.64
TRA2B-201ENST00000259043 PIAS3Q9Y6X2 628 aa4.8□□□□□ -1.64
TRA2B-201ENST00000259043 DNAH12Q6ZR08 3092 aa4.79□□□□□ -1.64
TRA2B-201ENST00000259043 CCL15-CCL14A0A0B4J2E2 113 aa4.79□□□□□ -1.64
TRA2B-201ENST00000259043 SNAP23O00161 211 aa4.79□□□□□ -1.64
TRA2B-201ENST00000259043 BMPR1BO00238 502 aa4.79□□□□□ -1.64
TRA2B-201ENST00000259043 HEXAP06865 529 aa4.79□□□□□ -1.64
TRA2B-201ENST00000259043 UMODP07911 640 aa4.79□□□□□ -1.64
TRA2B-201ENST00000259043 AGAP20933 346 aa4.79□□□□□ -1.64
TRA2B-201ENST00000259043 MMP14P50281 582 aa4.79□□□□□ -1.64
TRA2B-201ENST00000259043 PRMT2P55345 433 aa4.79□□□□□ -1.64
TRA2B-201ENST00000259043 ZNF155Q12901 538 aaPredicted RBP4.79□□□□□ -1.64
TRA2B-201ENST00000259043 GRIK3Q13003 919 aa4.79□□□□□ -1.64
TRA2B-201ENST00000259043 VGLL4Q14135 290 aa4.79□□□□□ -1.64
TRA2B-201ENST00000259043 CCL15Q16663 113 aa4.79□□□□□ -1.64
TRA2B-201ENST00000259043 AMZ1Q400G9 498 aa4.79□□□□□ -1.64
TRA2B-201ENST00000259043 SGO1Q5FBB7 561 aa4.79□□□□□ -1.64
TRA2B-201ENST00000259043 PAPPA-AS1Q5QFB9 102 aa4.79□□□□□ -1.64
TRA2B-201ENST00000259043 LRRC8EQ6NSJ5 796 aa4.79□□□□□ -1.64
TRA2B-201ENST00000259043 ANKRD54Q6NXT1 300 aa4.79□□□□□ -1.64
TRA2B-201ENST00000259043 MEX3BQ6ZN04 569 aaKnown RBP4.79□□□□□ -1.64
TRA2B-201ENST00000259043 GALNT5Q7Z7M9 940 aa4.79□□□□□ -1.64
TRA2B-201ENST00000259043 TADA2BQ86TJ2 420 aa4.79□□□□□ -1.64
TRA2B-201ENST00000259043 U2AF1L4Q8WU68 220 aaKnown RBP4.79□□□□□ -1.64
TRA2B-201ENST00000259043 POMGNT1Q8WZA1 660 aa4.79□□□□□ -1.64
TRA2B-201ENST00000259043 SMARCE1Q969G3 411 aa4.79□□□□□ -1.64
TRA2B-201ENST00000259043 CFAP53Q96M91 514 aa4.79□□□□□ -1.64
TRA2B-201ENST00000259043 ESRP2Q9H6T0 727 aaKnown RBP4.79□□□□□ -1.64
TRA2B-201ENST00000259043 BRF2Q9HAW0 419 aa4.79□□□□□ -1.64
TRA2B-201ENST00000259043 ANKEF1Q9NU02 776 aa4.79□□□□□ -1.64
TRA2B-201ENST00000259043 HSPB7Q9UBY9 170 aa4.79□□□□□ -1.64
TRA2B-201ENST00000259043 LIMA1Q9UHB6 759 aaKnown RBP4.79□□□□□ -1.64
TRA2B-201ENST00000259043 CDC14AQ9UNH5 594 aa4.79□□□□□ -1.64
TRA2B-201ENST00000259043 TMEM5Q9Y2B1 443 aa4.79□□□□□ -1.64
TRA2B-201ENST00000259043 CARD8Q9Y2G2 431 aa4.79□□□□□ -1.64
TRA2B-201ENST00000259043 COL2A1P02458 1487 aaPredicted RBP4.79□□□□□ -1.64
TRA2B-201ENST00000259043 AK9Q5TCS8 1911 aa4.78□□□□□ -1.64
TRA2B-201ENST00000259043 PIEZO1Q92508 2521 aa4.78□□□□□ -1.64
TRA2B-201ENST00000259043 PTGES3LE9PB15 166 aa4.78□□□□□ -1.64
TRA2B-201ENST00000259043 PLOD3O60568 738 aa4.78□□□□□ -1.64
TRA2B-201ENST00000259043 IGLV2-11P01706 119 aa4.78□□□□□ -1.64
TRA2B-201ENST00000259043 PCCAP05165 728 aaPredicted RBP4.78□□□□□ -1.64
TRA2B-201ENST00000259043 CDH2P19022 906 aaPredicted RBP4.78□□□□□ -1.64
TRA2B-201ENST00000259043 CPOXP36551 454 aa4.78□□□□□ -1.64
TRA2B-201ENST00000259043 RGS2P41220 211 aa4.78□□□□□ -1.64
TRA2B-201ENST00000259043 PSMC4P43686 418 aa4.78□□□□□ -1.64
TRA2B-201ENST00000259043 PRKCZQ05513 592 aa4.78□□□□□ -1.64
TRA2B-201ENST00000259043 CHAF1BQ13112 559 aa4.78□□□□□ -1.64
TRA2B-201ENST00000259043 ACVR2BQ13705 512 aa4.78□□□□□ -1.64
TRA2B-201ENST00000259043 GSTA3Q16772 222 aa4.78□□□□□ -1.64
TRA2B-201ENST00000259043 CCDC152Q4G0S7 254 aa4.78□□□□□ -1.64
TRA2B-201ENST00000259043 SLC9B1Q4ZJI4 515 aa4.78□□□□□ -1.64
TRA2B-201ENST00000259043 FAM133BQ5BKY9 247 aaKnown RBP4.78□□□□□ -1.64
TRA2B-201ENST00000259043 TMEM81Q6P7N7 255 aa4.78□□□□□ -1.64
TRA2B-201ENST00000259043 TMCO3Q6UWJ1 677 aa4.78□□□□□ -1.64
TRA2B-201ENST00000259043 B3GNT6Q6ZMB0 384 aa4.78□□□□□ -1.64
TRA2B-201ENST00000259043 IKBIPQ70UQ0 350 aa4.78□□□□□ -1.64
TRA2B-201ENST00000259043 TUBA1AQ71U36 451 aa4.78□□□□□ -1.64
TRA2B-201ENST00000259043 MTSS1LQ765P7 747 aa4.78□□□□□ -1.64
TRA2B-201ENST00000259043 GPAT4Q86UL3 456 aa4.78□□□□□ -1.64
TRA2B-201ENST00000259043 SATL1Q86VE3 508 aa4.78□□□□□ -1.64
TRA2B-201ENST00000259043 TMPRSS12Q86WS5 348 aa4.78□□□□□ -1.64
TRA2B-201ENST00000259043 FOXRED2Q8IWF2 684 aa4.78□□□□□ -1.64
TRA2B-201ENST00000259043 LSMEM1Q8N8F7 131 aa4.78□□□□□ -1.64
TRA2B-201ENST00000259043 ZNF441Q8N8Z8 693 aa4.78□□□□□ -1.64
TRA2B-201ENST00000259043 SCFD2Q8WU76 684 aa4.78□□□□□ -1.64
TRA2B-201ENST00000259043 FAM149B1Q96BN6 582 aa4.78□□□□□ -1.64
TRA2B-201ENST00000259043 ZC3HAV1LQ96H79 300 aaKnown RBP4.78□□□□□ -1.64
TRA2B-201ENST00000259043 INPP4AQ96PE3 977 aaPredicted RBP4.78□□□□□ -1.64
TRA2B-201ENST00000259043 TUBA1CQ9BQE3 449 aa4.78□□□□□ -1.64
TRA2B-201ENST00000259043 NUF2Q9BZD4 464 aa4.78□□□□□ -1.64
TRA2B-201ENST00000259043 UBTD1Q9HAC8 227 aa4.78□□□□□ -1.64
TRA2B-201ENST00000259043 CD209Q9NNX6 404 aa4.78□□□□□ -1.64
TRA2B-201ENST00000259043 ZNF224Q9NZL3 707 aa4.78□□□□□ -1.64
TRA2B-201ENST00000259043 CTNNAL1Q9UBT7 734 aa4.78□□□□□ -1.64
TRA2B-201ENST00000259043 ADD3Q9UEY8 706 aaKnown RBP4.78□□□□□ -1.64
TRA2B-201ENST00000259043 SNX9Q9Y5X1 595 aa4.78□□□□□ -1.64
TRA2B-201ENST00000259043 FRMPD3Q5JV73 1810 aa4.78□□□□□ -1.64
TRA2B-201ENST00000259043 MAST2Q6P0Q8 1798 aa4.78□□□□□ -1.64
TRA2B-201ENST00000259043 PTPRFP10586 1907 aa4.78□□□□□ -1.64
TRA2B-201ENST00000259043 ZNF587BE7ETH6 402 aa4.77□□□□□ -1.65
TRA2B-201ENST00000259043 IFNL4K9M1U5 179 aa4.77□□□□□ -1.65
TRA2B-201ENST00000259043 TAF4O00268 1085 aa4.77□□□□□ -1.65
TRA2B-201ENST00000259043 MID1O15344 667 aa4.77□□□□□ -1.65
TRA2B-201ENST00000259043 GRID2O43424 1007 aa4.77□□□□□ -1.65
TRA2B-201ENST00000259043 PLRG1O43660 514 aaKnown RBP4.77□□□□□ -1.65
TRA2B-201ENST00000259043 AHCYL1O43865 530 aa4.77□□□□□ -1.65
TRA2B-201ENST00000259043 MLYCDO95822 493 aa4.77□□□□□ -1.65
TRA2B-201ENST00000259043 IRF1P10914 325 aa4.77□□□□□ -1.65
TRA2B-201ENST00000259043 ETFAP13804 333 aa4.77□□□□□ -1.65
TRA2B-201ENST00000259043 MAPK4P31152 587 aa4.77□□□□□ -1.65
TRA2B-201ENST00000259043 KRT20P35900 424 aa4.77□□□□□ -1.65
TRA2B-201ENST00000259043 PSMB10P40306 273 aa4.77□□□□□ -1.65
TRA2B-201ENST00000259043 PRAMEP78395 509 aa4.77□□□□□ -1.65
TRA2B-201ENST00000259043 IRX6P78412 446 aaPredicted RBP4.77□□□□□ -1.65
TRA2B-201ENST00000259043 MC1RQ01726 317 aa4.77□□□□□ -1.65
TRA2B-201ENST00000259043 CREB5Q02930 508 aa4.77□□□□□ -1.65
TRA2B-201ENST00000259043 CALD1Q05682 793 aaKnown RBP4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms