RNA–Protein interactions for RNA: ENST00000257262.12

TMEM258-201, Transcript of transmembrane protein 258, humanhuman

TSL 3

Gene TMEM258, Length 468 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-201ENST00000257262 CLDN19Q8N6F1 224 aa8.36□□□□□ -1.07
TMEM258-201ENST00000257262 MCUQ8NE86 351 aa8.36□□□□□ -1.07
TMEM258-201ENST00000257262 MDM1Q8TC05 714 aa8.36□□□□□ -1.07
TMEM258-201ENST00000257262 PEX13Q92968 403 aa8.36□□□□□ -1.07
TMEM258-201ENST00000257262 MFSD3Q96ES6 412 aa8.36□□□□□ -1.07
TMEM258-201ENST00000257262 ATXN7L3BQ96GX2 97 aa8.36□□□□□ -1.07
TMEM258-201ENST00000257262 LINC00615Q96LM1 132 aaPredicted RBP8.36□□□□□ -1.07
TMEM258-201ENST00000257262 SERPINB12Q96P63 405 aa8.36□□□□□ -1.07
TMEM258-201ENST00000257262 SLC38A3Q99624 504 aa8.36□□□□□ -1.07
TMEM258-201ENST00000257262 KIFC1Q9BW19 673 aa8.36□□□□□ -1.07
TMEM258-201ENST00000257262 LDHAL6BQ9BYZ2 381 aaPredicted RBP8.36□□□□□ -1.07
TMEM258-201ENST00000257262 NRSN2Q9GZP1 204 aa8.36□□□□□ -1.07
TMEM258-201ENST00000257262 STN1Q9H668 368 aaKnown RBP8.36□□□□□ -1.07
TMEM258-201ENST00000257262 CCDC86Q9H6F5 360 aaKnown RBP8.36□□□□□ -1.07
TMEM258-201ENST00000257262 RDH14Q9HBH5 336 aa8.36□□□□□ -1.07
TMEM258-201ENST00000257262 SARS2Q9NP81 518 aaKnown RBP8.36□□□□□ -1.07
TMEM258-201ENST00000257262 WASH6PQ9NQA3 447 aa8.36□□□□□ -1.07
TMEM258-201ENST00000257262 TREX1Q9NSU2 369 aa8.36□□□□□ -1.07
TMEM258-201ENST00000257262 KCNK4Q9NYG8 393 aa8.36□□□□□ -1.07
TMEM258-201ENST00000257262 CPNE7Q9UBL6 633 aa8.36□□□□□ -1.07
TMEM258-201ENST00000257262 FAM8A1Q9UBU6 413 aa8.36□□□□□ -1.07
TMEM258-201ENST00000257262 ANAPC5Q9UJX4 755 aa8.36□□□□□ -1.07
TMEM258-201ENST00000257262 SOX13Q9UN79 622 aa8.36□□□□□ -1.07
TMEM258-201ENST00000257262 AK5Q9Y6K8 562 aa8.36□□□□□ -1.07
TMEM258-201ENST00000257262 PRSS21Q9Y6M0 314 aa8.36□□□□□ -1.07
TMEM258-201ENST00000257262 C17orf113A0A1B0GUU1 675 aa8.35□□□□□ -1.07
TMEM258-201ENST00000257262 MAGEB16A2A368 324 aa8.35□□□□□ -1.07
TMEM258-201ENST00000257262 SDR42E2A6NKP2 422 aa8.35□□□□□ -1.07
TMEM258-201ENST00000257262 D6RAR5 112 aa8.35□□□□□ -1.07
TMEM258-201ENST00000257262 CD3EAPO15446 510 aaKnown RBP8.35□□□□□ -1.07
TMEM258-201ENST00000257262 OR1I1O60431 355 aa8.35□□□□□ -1.07
TMEM258-201ENST00000257262 VAPBO95292 243 aa8.35□□□□□ -1.07
TMEM258-201ENST00000257262 CPNE6O95741 557 aa8.35□□□□□ -1.07
TMEM258-201ENST00000257262 VIPP01282 170 aa8.35□□□□□ -1.07
TMEM258-201ENST00000257262 MPOP05164 745 aa8.35□□□□□ -1.07
TMEM258-201ENST00000257262 POLBP06746 335 aa8.35□□□□□ -1.07
TMEM258-201ENST00000257262 IVDP26440 423 aa8.35□□□□□ -1.07
TMEM258-201ENST00000257262 HALP42357 657 aa8.35□□□□□ -1.07
TMEM258-201ENST00000257262 NSG1P42857 185 aa8.35□□□□□ -1.07
TMEM258-201ENST00000257262 PRLHRP49683 370 aa8.35□□□□□ -1.07
TMEM258-201ENST00000257262 INHBCP55103 352 aa8.35□□□□□ -1.07
TMEM258-201ENST00000257262 UBE2IP63279 158 aaKnown RBP8.35□□□□□ -1.07
TMEM258-201ENST00000257262 CFHR1Q03591 330 aa8.35□□□□□ -1.07
TMEM258-201ENST00000257262 SQSTM1Q13501 440 aa8.35□□□□□ -1.07
TMEM258-201ENST00000257262 ITIH4Q14624 930 aa8.35□□□□□ -1.07
TMEM258-201ENST00000257262 RTP5Q14D33 572 aa8.35□□□□□ -1.07
TMEM258-201ENST00000257262 MSS51Q4VC12 460 aa8.35□□□□□ -1.07
TMEM258-201ENST00000257262 RNASEH2BQ5TBB1 312 aaKnown RBP8.35□□□□□ -1.07
TMEM258-201ENST00000257262 LYPLAL1Q5VWZ2 237 aa8.35□□□□□ -1.07
TMEM258-201ENST00000257262 IZUMO3Q5VZ72 239 aa8.35□□□□□ -1.07
TMEM258-201ENST00000257262 CASC4Q6P4E1 433 aa8.35□□□□□ -1.07
TMEM258-201ENST00000257262 BRICD5Q6PL45 260 aa8.35□□□□□ -1.07
TMEM258-201ENST00000257262 CERS6Q6ZMG9 384 aa8.35□□□□□ -1.07
TMEM258-201ENST00000257262 PCGF5Q86SE9 256 aa8.35□□□□□ -1.07
TMEM258-201ENST00000257262 LDB1Q86U70 411 aaPredicted RBP8.35□□□□□ -1.07
TMEM258-201ENST00000257262 TRIM48Q8IWZ4 208 aa8.35□□□□□ -1.07
TMEM258-201ENST00000257262 AGGF1Q8N302 714 aaeCLIP8.35□□□□□ -1.07
TMEM258-201ENST00000257262 LILRA3Q8N6C8 439 aaPredicted RBP8.35□□□□□ -1.07
TMEM258-201ENST00000257262 KDF1Q8NAX2 398 aaPredicted RBP8.35□□□□□ -1.07
TMEM258-201ENST00000257262 SH3KBP1Q96B97 665 aa8.35□□□□□ -1.07
TMEM258-201ENST00000257262 GRAMD1AQ96CP6 724 aa8.35□□□□□ -1.07
TMEM258-201ENST00000257262 CXorf40BQ96DE9 158 aa8.35□□□□□ -1.07
TMEM258-201ENST00000257262 AHCYL2Q96HN2 611 aaKnown RBP8.35□□□□□ -1.07
TMEM258-201ENST00000257262 SGSM3Q96HU1 749 aa8.35□□□□□ -1.07
TMEM258-201ENST00000257262 SIGLEC10Q96LC7 697 aa8.35□□□□□ -1.07
TMEM258-201ENST00000257262 INSM2Q96T92 566 aaPredicted RBP8.35□□□□□ -1.07
TMEM258-201ENST00000257262 KRT12Q99456 494 aa8.35□□□□□ -1.07
TMEM258-201ENST00000257262 TTC1Q99614 292 aa8.35□□□□□ -1.07
TMEM258-201ENST00000257262 NUDT22Q9BRQ3 303 aa8.35□□□□□ -1.07
TMEM258-201ENST00000257262 TRIM56Q9BRZ2 755 aaKnown RBP8.35□□□□□ -1.07
TMEM258-201ENST00000257262 CCM2Q9BSQ5 444 aa8.35□□□□□ -1.07
TMEM258-201ENST00000257262 TBC1D10AQ9BXI6 508 aa8.35□□□□□ -1.07
TMEM258-201ENST00000257262 FOXP3Q9BZS1 431 aa8.35□□□□□ -1.07
TMEM258-201ENST00000257262 WWP1Q9H0M0 922 aa8.35□□□□□ -1.07
TMEM258-201ENST00000257262 SEMA6CQ9H3T2 930 aa8.35□□□□□ -1.07
TMEM258-201ENST00000257262 MRM3Q9HC36 420 aaKnown RBP8.35□□□□□ -1.07
TMEM258-201ENST00000257262 EPB41L5Q9HCM4 733 aa8.35□□□□□ -1.07
TMEM258-201ENST00000257262 SLC40A1Q9NP59 571 aa8.35□□□□□ -1.07
TMEM258-201ENST00000257262 CATSPERZQ9NTU4 200 aa8.35□□□□□ -1.07
TMEM258-201ENST00000257262 ASIC3Q9UHC3 531 aa8.35□□□□□ -1.07
TMEM258-201ENST00000257262 ACSL5Q9ULC5 683 aa8.35□□□□□ -1.07
TMEM258-201ENST00000257262 RP1P56715 2156 aa8.35□□□□□ -1.07
TMEM258-201ENST00000257262 ASXL3Q9C0F0 2248 aa8.34□□□□□ -1.07
TMEM258-201ENST00000257262 A0A1W2PNU3 283 aaPredicted RBP8.34□□□□□ -1.07
TMEM258-201ENST00000257262 KLHL33A6NCF5 533 aa8.34□□□□□ -1.07
TMEM258-201ENST00000257262 GOLGA8KD6RF30 607 aa8.34□□□□□ -1.07
TMEM258-201ENST00000257262 GOLGA8TH3BQL2 631 aa8.34□□□□□ -1.07
TMEM258-201ENST00000257262 AGRPO00253 132 aa8.34□□□□□ -1.07
TMEM258-201ENST00000257262 TAF4O00268 1085 aa8.34□□□□□ -1.07
TMEM258-201ENST00000257262 TTI1O43156 1089 aa8.34□□□□□ -1.07
TMEM258-201ENST00000257262 AP2A2O94973 939 aa8.34□□□□□ -1.07
TMEM258-201ENST00000257262 OR56A5P0C7T3 313 aa8.34□□□□□ -1.07
TMEM258-201ENST00000257262 MPSTP25325 297 aa8.34□□□□□ -1.07
TMEM258-201ENST00000257262 PPARGP37231 505 aaPredicted RBP8.34□□□□□ -1.07
TMEM258-201ENST00000257262 MAPK9P45984 424 aa8.34□□□□□ -1.07
TMEM258-201ENST00000257262 PPM1FP49593 454 aaPredicted RBP8.34□□□□□ -1.07
TMEM258-201ENST00000257262 LIMK2P53671 638 aa8.34□□□□□ -1.07
TMEM258-201ENST00000257262 GPLD1P80108 840 aa8.34□□□□□ -1.07
TMEM258-201ENST00000257262 ZFP36L1Q07352 338 aaKnown RBP8.34□□□□□ -1.07
TMEM258-201ENST00000257262 GPR18Q14330 331 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms