RNA–Protein interactions for RNA: ENST00000257181.9

PRPF38A-201, Transcript of pre-mRNA processing factor 38A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38A, Length 5,274 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-201ENST00000257181 SRPK3Q9UPE1 567 aa13.25□□□□□ -0.29
PRPF38A-201ENST00000257181 A0A1B0GTW7 788 aa13.25□□□□□ -0.29
PRPF38A-201ENST00000257181 H7C0S8 307 aa13.25□□□□□ -0.29
PRPF38A-201ENST00000257181 ACOT7O00154 380 aa13.25□□□□□ -0.29
PRPF38A-201ENST00000257181 ACP5P13686 325 aa13.25□□□□□ -0.29
PRPF38A-201ENST00000257181 JUNDP17535 347 aa13.25□□□□□ -0.29
PRPF38A-201ENST00000257181 ALDH4A1P30038 563 aa13.25□□□□□ -0.29
PRPF38A-201ENST00000257181 GSCP56915 257 aaPredicted RBP13.25□□□□□ -0.29
PRPF38A-201ENST00000257181 NPY5RQ15761 445 aa13.25□□□□□ -0.29
PRPF38A-201ENST00000257181 Q6ZVU0 165 aa13.25□□□□□ -0.29
PRPF38A-201ENST00000257181 ARMCX6Q7L4S7 300 aa13.25□□□□□ -0.29
PRPF38A-201ENST00000257181 SIX5Q8N196 739 aa13.25□□□□□ -0.29
PRPF38A-201ENST00000257181 GLB1L3Q8NCI6 653 aaPredicted RBP13.25□□□□□ -0.29
PRPF38A-201ENST00000257181 GLIS3Q8NEA6 775 aa13.25□□□□□ -0.29
PRPF38A-201ENST00000257181 OR5L2Q8NGL0 311 aa13.25□□□□□ -0.29
PRPF38A-201ENST00000257181 SLC38A2Q96QD8 506 aa13.25□□□□□ -0.29
PRPF38A-201ENST00000257181 MCCC2Q9HCC0 563 aa13.25□□□□□ -0.29
PRPF38A-201ENST00000257181 SEMA4BQ9NPR2 832 aaPredicted RBP13.25□□□□□ -0.29
PRPF38A-201ENST00000257181 MYH1P12882 1939 aa13.25□□□□□ -0.29
PRPF38A-201ENST00000257181 OR1F1O43749 312 aa13.25□□□□□ -0.29
PRPF38A-201ENST00000257181 PRKG2Q13237 762 aa13.25□□□□□ -0.29
PRPF38A-201ENST00000257181 DSC3Q14574 896 aa13.25□□□□□ -0.29
PRPF38A-201ENST00000257181 PRAMEF14Q5SWL7 426 aa13.25□□□□□ -0.29
PRPF38A-201ENST00000257181 C9orf64Q5T6V5 341 aa13.25□□□□□ -0.29
PRPF38A-201ENST00000257181 PRAMEF13Q5VWM6 474 aa13.25□□□□□ -0.29
PRPF38A-201ENST00000257181 ZFP1Q6P2D0 407 aa13.25□□□□□ -0.29
PRPF38A-201ENST00000257181 WARS2Q9UGM6 360 aaKnown RBP13.25□□□□□ -0.29
PRPF38A-201ENST00000257181 KIR2DS5A0A0G2JLQ3 304 aa13.24□□□□□ -0.29
PRPF38A-201ENST00000257181 A0A0G2JNG1 304 aa13.24□□□□□ -0.29
PRPF38A-201ENST00000257181 KIR2DS3K7RE56 304 aa13.24□□□□□ -0.29
PRPF38A-201ENST00000257181 MGRN1O60291 552 aa13.24□□□□□ -0.29
PRPF38A-201ENST00000257181 MAPK12P53778 367 aa13.24□□□□□ -0.29
PRPF38A-201ENST00000257181 KIR2DS5Q14953 304 aa13.24□□□□□ -0.29
PRPF38A-201ENST00000257181 AGKQ53H12 422 aa13.24□□□□□ -0.29
PRPF38A-201ENST00000257181 RTP2Q5QGT7 225 aa13.24□□□□□ -0.29
PRPF38A-201ENST00000257181 RHBDD1Q8TEB9 315 aa13.24□□□□□ -0.29
PRPF38A-201ENST00000257181 CYB5D2Q8WUJ1 264 aa13.24□□□□□ -0.29
PRPF38A-201ENST00000257181 ZBED6CLQ96FA7 236 aaPredicted RBP13.24□□□□□ -0.29
PRPF38A-201ENST00000257181 B3GALT6Q96L58 329 aa13.24□□□□□ -0.29
PRPF38A-201ENST00000257181 INVSQ9Y283 1065 aa13.24□□□□□ -0.29
PRPF38A-201ENST00000257181 DGKBQ9Y6T7 804 aa13.24□□□□□ -0.29
PRPF38A-201ENST00000257181 PGLSO95336 258 aa13.24□□□□□ -0.29
PRPF38A-201ENST00000257181 FAM129CQ86XR2 697 aa13.24□□□□□ -0.29
PRPF38A-201ENST00000257181 ZNF567Q8N184 647 aa13.24□□□□□ -0.29
PRPF38A-201ENST00000257181 EME1Q96AY2 570 aa13.24□□□□□ -0.29
PRPF38A-201ENST00000257181 PGAP3Q96FM1 320 aaPredicted RBP13.24□□□□□ -0.29
PRPF38A-201ENST00000257181 ANAPC2Q9UJX6 822 aa13.24□□□□□ -0.29
PRPF38A-201ENST00000257181 PCDHGC4Q9Y5F7 938 aa13.24□□□□□ -0.29
PRPF38A-201ENST00000257181 CLCA3PQ9Y6N3 262 aa13.24□□□□□ -0.29
PRPF38A-201ENST00000257181 TIAM2Q8IVF5 1701 aa13.24□□□□□ -0.29
PRPF38A-201ENST00000257181 FCHO1O14526 889 aa13.24□□□□□ -0.29
PRPF38A-201ENST00000257181 DEAF1O75398 565 aaPredicted RBP13.24□□□□□ -0.29
PRPF38A-201ENST00000257181 TAS2R40P59535 323 aa13.24□□□□□ -0.29
PRPF38A-201ENST00000257181 PSPHP78330 225 aa13.24□□□□□ -0.29
PRPF38A-201ENST00000257181 NAE1Q13564 534 aa13.24□□□□□ -0.29
PRPF38A-201ENST00000257181 TCEAL1Q15170 157 aa13.24□□□□□ -0.29
PRPF38A-201ENST00000257181 HKDC1Q2TB90 917 aa13.24□□□□□ -0.29
PRPF38A-201ENST00000257181 OLFML1Q6UWY5 402 aa13.24□□□□□ -0.29
PRPF38A-201ENST00000257181 UNC5DQ6UXZ4 953 aa13.24□□□□□ -0.29
PRPF38A-201ENST00000257181 IFNEQ86WN2 208 aa13.24□□□□□ -0.29
PRPF38A-201ENST00000257181 OR10H5Q8NGA6 315 aa13.24□□□□□ -0.29
PRPF38A-201ENST00000257181 KIAA1191Q96A73 305 aa13.24□□□□□ -0.29
PRPF38A-201ENST00000257181 ZFYVE19Q96K21 471 aa13.24□□□□□ -0.29
PRPF38A-201ENST00000257181 RPL10LQ96L21 214 aaKnown RBP13.24□□□□□ -0.29
PRPF38A-201ENST00000257181 APOL4Q9BPW4 351 aa13.24□□□□□ -0.29
PRPF38A-201ENST00000257181 LACRTQ9GZZ8 138 aa13.24□□□□□ -0.29
PRPF38A-201ENST00000257181 C8orf4Q9NR00 106 aa13.24□□□□□ -0.29
PRPF38A-201ENST00000257181 PRODH2Q9UF12 536 aa13.24□□□□□ -0.29
PRPF38A-201ENST00000257181 WBP11Q9Y2W2 641 aaKnown RBP13.24□□□□□ -0.29
PRPF38A-201ENST00000257181 E9PBE3 544 aa13.24□□□□□ -0.29
PRPF38A-201ENST00000257181 MATN4O95460 622 aa13.24□□□□□ -0.29
PRPF38A-201ENST00000257181 POU2F2P09086 479 aa13.24□□□□□ -0.29
PRPF38A-201ENST00000257181 SPIN4Q56A73 249 aa13.24□□□□□ -0.29
PRPF38A-201ENST00000257181 ZIM3Q96PE6 472 aa13.24□□□□□ -0.29
PRPF38A-201ENST00000257181 DEPDC7Q96QD5 511 aa13.24□□□□□ -0.29
PRPF38A-201ENST00000257181 WRAP73Q9P2S5 460 aaPredicted RBP13.24□□□□□ -0.29
PRPF38A-201ENST00000257181 FAM155AB1AL88 458 aaPredicted RBP13.23□□□□□ -0.29
PRPF38A-201ENST00000257181 ZNF682O95780 498 aa13.23□□□□□ -0.29
PRPF38A-201ENST00000257181 GOT2P00505 430 aaKnown RBP13.23□□□□□ -0.29
PRPF38A-201ENST00000257181 ITGB1P05556 798 aa13.23□□□□□ -0.29
PRPF38A-201ENST00000257181 HEXBP07686 556 aa13.23□□□□□ -0.29
PRPF38A-201ENST00000257181 MPIP34949 423 aa13.23□□□□□ -0.29
PRPF38A-201ENST00000257181 GTF2A1P52655 376 aaPredicted RBP13.23□□□□□ -0.29
PRPF38A-201ENST00000257181 SLC16A1P53985 500 aa13.23□□□□□ -0.29
PRPF38A-201ENST00000257181 GBX1Q14549 363 aa13.23□□□□□ -0.29
PRPF38A-201ENST00000257181 DUOXA1Q1HG43 343 aa13.23□□□□□ -0.29
PRPF38A-201ENST00000257181 PCDHB18PQ96TA0 734 aa13.23□□□□□ -0.29
PRPF38A-201ENST00000257181 USP12O75317 370 aa13.23□□□□□ -0.29
PRPF38A-201ENST00000257181 PTX3P26022 381 aaPredicted RBP13.23□□□□□ -0.29
PRPF38A-201ENST00000257181 DEFB103AP81534 67 aa13.23□□□□□ -0.29
PRPF38A-201ENST00000257181 CAPRIN2Q6IMN6 1127 aaKnown RBP13.23□□□□□ -0.29
PRPF38A-201ENST00000257181 RANBP3LQ86VV4 465 aaPredicted RBP13.23□□□□□ -0.29
PRPF38A-201ENST00000257181 ADHFE1Q8IWW8 467 aa13.23□□□□□ -0.29
PRPF38A-201ENST00000257181 SPPL2AQ8TCT8 520 aa13.23□□□□□ -0.29
PRPF38A-201ENST00000257181 EDAQ92838 391 aa13.23□□□□□ -0.29
PRPF38A-201ENST00000257181 MR1Q95460 341 aa13.23□□□□□ -0.29
PRPF38A-201ENST00000257181 KLF6Q99612 283 aaPredicted RBP13.23□□□□□ -0.29
PRPF38A-201ENST00000257181 FEM1AQ9BSK4 669 aa13.23□□□□□ -0.29
PRPF38A-201ENST00000257181 SSU72Q9NP77 194 aaKnown RBP13.23□□□□□ -0.29
PRPF38A-201ENST00000257181 TBX21Q9UL17 535 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms