RNA–Protein interactions for RNA: ENST00000244745.3

SOX4-201, Transcript of SRY-box 4, humanhuman

APPRIS P1 BASIC

Gene SOX4, Length 5,852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX4-201ENST00000244745 COMMD9Q9P000 198 aa19.62■□□□□ 0.73
SOX4-201ENST00000244745 PSIP1O75475 530 aaKnown RBP19.62■□□□□ 0.73
SOX4-201ENST00000244745 CCL23P55773 120 aa19.62■□□□□ 0.73
SOX4-201ENST00000244745 C6orf183Q5T699 404 aa19.62■□□□□ 0.73
SOX4-201ENST00000244745 KIAA0930Q6ICG6 404 aaPredicted RBP19.62■□□□□ 0.73
SOX4-201ENST00000244745 PHTF2Q8N3S3 785 aa19.62■□□□□ 0.73
SOX4-201ENST00000244745 C1GALT1C1Q96EU7 318 aa19.62■□□□□ 0.73
SOX4-201ENST00000244745 PKP2Q99959 881 aa19.62■□□□□ 0.73
SOX4-201ENST00000244745 DPP7Q9UHL4 492 aa19.62■□□□□ 0.73
SOX4-201ENST00000244745 PEX16Q9Y5Y5 336 aa19.62■□□□□ 0.73
SOX4-201ENST00000244745 TTC24A2A3L6 582 aaPredicted RBP19.62■□□□□ 0.73
SOX4-201ENST00000244745 PDCD10Q9BUL8 212 aa19.62■□□□□ 0.73
SOX4-201ENST00000244745 TNKS2Q9H2K2 1166 aa19.62■□□□□ 0.73
SOX4-201ENST00000244745 FBXO10Q9UK96 956 aa19.62■□□□□ 0.73
SOX4-201ENST00000244745 ELFN1P0C7U0 828 aa19.62■□□□□ 0.73
SOX4-201ENST00000244745 NR2F6P10588 404 aa19.62■□□□□ 0.73
SOX4-201ENST00000244745 SMPD1P17405 629 aa19.62■□□□□ 0.73
SOX4-201ENST00000244745 LCN1P1Q5VSP4 162 aa19.62■□□□□ 0.73
SOX4-201ENST00000244745 SERPINA9Q86WD7 417 aa19.62■□□□□ 0.73
SOX4-201ENST00000244745 POMGNT2Q8NAT1 580 aa19.62■□□□□ 0.73
SOX4-201ENST00000244745 DDX1Q92499 740 aaKnown RBP19.62■□□□□ 0.73
SOX4-201ENST00000244745 PIK3R3Q92569 461 aa19.62■□□□□ 0.73
SOX4-201ENST00000244745 MCMBPQ9BTE3 642 aa19.62■□□□□ 0.73
SOX4-201ENST00000244745 GPR88Q9GZN0 384 aa19.62■□□□□ 0.73
SOX4-201ENST00000244745 MARCH7Q9H992 704 aa19.62■□□□□ 0.73
SOX4-201ENST00000244745 GMEB1Q9Y692 573 aa19.62■□□□□ 0.73
SOX4-201ENST00000244745 MYH8P13535 1937 aa19.61■□□□□ 0.73
SOX4-201ENST00000244745 KLF11O14901 512 aa19.61■□□□□ 0.73
SOX4-201ENST00000244745 TBX1O43435 398 aa19.61■□□□□ 0.73
SOX4-201ENST00000244745 RPL4P36578 427 aaKnown RBP19.61■□□□□ 0.73
SOX4-201ENST00000244745 RPIAP49247 311 aa19.61■□□□□ 0.73
SOX4-201ENST00000244745 HERVK_113P63132 956 aa19.61■□□□□ 0.73
SOX4-201ENST00000244745 EIF2B5Q13144 721 aaKnown RBP19.61■□□□□ 0.73
SOX4-201ENST00000244745 FAXDC2Q96IV6 333 aa19.61■□□□□ 0.73
SOX4-201ENST00000244745 FBXL18Q96ME1 805 aa19.61■□□□□ 0.73
SOX4-201ENST00000244745 ERVK-6Q9BXR3 956 aa19.61■□□□□ 0.73
SOX4-201ENST00000244745 NEDD8-MDP1E9PL57 170 aa19.61■□□□□ 0.73
SOX4-201ENST00000244745 PDLIM1O00151 329 aa19.61■□□□□ 0.73
SOX4-201ENST00000244745 MYCLP1P12525 358 aaPredicted RBP19.61■□□□□ 0.73
SOX4-201ENST00000244745 SDC2P34741 201 aa19.61■□□□□ 0.73
SOX4-201ENST00000244745 ELP6Q0PNE2 266 aa19.61■□□□□ 0.73
SOX4-201ENST00000244745 NAT16Q8N8M0 369 aa19.61■□□□□ 0.73
SOX4-201ENST00000244745 SCAIQ8N9R8 606 aa19.61■□□□□ 0.73
SOX4-201ENST00000244745 GRPEL2Q8TAA5 225 aa19.61■□□□□ 0.73
SOX4-201ENST00000244745 LIN28AQ9H9Z2 209 aaKnown RBP19.61■□□□□ 0.73
SOX4-201ENST00000244745 CACNG4Q9UBN1 327 aa19.61■□□□□ 0.73
SOX4-201ENST00000244745 CHURC1-FNTBB4DL54 471 aa19.61■□□□□ 0.73
SOX4-201ENST00000244745 IL1BP01584 269 aa19.61■□□□□ 0.73
SOX4-201ENST00000244745 CCR10P46092 362 aa19.61■□□□□ 0.73
SOX4-201ENST00000244745 MAPKAPK2P49137 400 aa19.61■□□□□ 0.73
SOX4-201ENST00000244745 EPGNQ6UW88 154 aa19.61■□□□□ 0.73
SOX4-201ENST00000244745 GPR65Q8IYL9 337 aa19.61■□□□□ 0.73
SOX4-201ENST00000244745 CDK15Q96Q40 435 aa19.61■□□□□ 0.73
SOX4-201ENST00000244745 TTPALQ9BTX7 342 aa19.61■□□□□ 0.73
SOX4-201ENST00000244745 TOR3AQ9H497 397 aa19.61■□□□□ 0.73
SOX4-201ENST00000244745 POLR3BQ9NW08 1133 aaPredicted RBP19.61■□□□□ 0.73
SOX4-201ENST00000244745 FCF1Q9Y324 198 aaKnown RBP19.61■□□□□ 0.73
SOX4-201ENST00000244745 MSCO60682 206 aa19.61■□□□□ 0.73
SOX4-201ENST00000244745 DHFRP00374 187 aa19.61■□□□□ 0.73
SOX4-201ENST00000244745 RAP2AP10114 183 aa19.61■□□□□ 0.73
SOX4-201ENST00000244745 CKMT2P17540 419 aa19.61■□□□□ 0.73
SOX4-201ENST00000244745 BMP7P18075 431 aa19.61■□□□□ 0.73
SOX4-201ENST00000244745 TUBA4AP68366 448 aa19.61■□□□□ 0.73
SOX4-201ENST00000244745 CAPN13Q6MZZ7 669 aaPredicted RBP19.61■□□□□ 0.73
SOX4-201ENST00000244745 DRAXINQ8NBI3 349 aaPredicted RBP19.61■□□□□ 0.73
SOX4-201ENST00000244745 MCUBQ9NWR8 336 aa19.61■□□□□ 0.73
SOX4-201ENST00000244745 SLC7A4O43246 635 aa19.61■□□□□ 0.73
SOX4-201ENST00000244745 AOC1P19801 751 aa19.61■□□□□ 0.73
SOX4-201ENST00000244745 IMPDH1P20839 514 aa19.61■□□□□ 0.73
SOX4-201ENST00000244745 FMO3P31513 532 aa19.61■□□□□ 0.73
SOX4-201ENST00000244745 MBLAC2Q68D91 279 aa19.61■□□□□ 0.73
SOX4-201ENST00000244745 CXXC5Q7LFL8 322 aaKnown RBP19.61■□□□□ 0.73
SOX4-201ENST00000244745 CLIP4Q8N3C7 705 aa19.61■□□□□ 0.73
SOX4-201ENST00000244745 SLC39A3Q9BRY0 314 aa19.61■□□□□ 0.73
SOX4-201ENST00000244745 CFAP97Q9P2B7 532 aa19.61■□□□□ 0.73
SOX4-201ENST00000244745 POLR1DQ9Y2S0 133 aa19.61■□□□□ 0.73
SOX4-201ENST00000244745 TESMINQ9Y4I5 508 aa19.61■□□□□ 0.73
SOX4-201ENST00000244745 C9IYK1 514 aa19.6■□□□□ 0.73
SOX4-201ENST00000244745 NOS1APO75052 506 aaPredicted RBP19.6■□□□□ 0.73
SOX4-201ENST00000244745 HLA-DQB2P05538 268 aa19.6■□□□□ 0.73
SOX4-201ENST00000244745 EFNA1P20827 205 aaPredicted RBP19.6■□□□□ 0.73
SOX4-201ENST00000244745 PBX3P40426 434 aa19.6■□□□□ 0.73
SOX4-201ENST00000244745 GJA9P57773 515 aa19.6■□□□□ 0.73
SOX4-201ENST00000244745 HSF2Q03933 536 aa19.6■□□□□ 0.73
SOX4-201ENST00000244745 ZDHHC21Q8IVQ6 265 aa19.6■□□□□ 0.73
SOX4-201ENST00000244745 C1orf21Q9H246 121 aa19.6■□□□□ 0.73
SOX4-201ENST00000244745 KAT8Q9H7Z6 458 aaKnown RBP19.6■□□□□ 0.73
SOX4-201ENST00000244745 A0A1W2PQ72 361 aa19.6■□□□□ 0.73
SOX4-201ENST00000244745 OR2B6P58173 313 aa19.6■□□□□ 0.73
SOX4-201ENST00000244745 SP2Q02086 613 aa19.6■□□□□ 0.73
SOX4-201ENST00000244745 C2orf80Q0P641 193 aa19.6■□□□□ 0.73
SOX4-201ENST00000244745 FAM174BQ3ZCQ3 159 aa19.6■□□□□ 0.73
SOX4-201ENST00000244745 NUSAP1Q9BXS6 441 aaKnown RBP19.6■□□□□ 0.73
SOX4-201ENST00000244745 NMUR1Q9HB89 426 aa19.6■□□□□ 0.73
SOX4-201ENST00000244745 PADI3Q9ULW8 664 aa19.6■□□□□ 0.73
SOX4-201ENST00000244745 RCVRNP35243 200 aa19.6■□□□□ 0.73
SOX4-201ENST00000244745 SMYD1Q8NB12 490 aa19.6■□□□□ 0.73
SOX4-201ENST00000244745 SPPL2BQ8TCT7 592 aa19.6■□□□□ 0.73
SOX4-201ENST00000244745 BRSK1Q8TDC3 778 aa19.6■□□□□ 0.73
SOX4-201ENST00000244745 SEMA3GQ9NS98 782 aa19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms