RNA–Protein interactions for RNA: ENST00000243082.4

HOXC11-201, Transcript of homeobox C11, humanhuman

TSL 3 BASIC

Gene HOXC11, Length 2,039 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-201ENST00000243082 UPK3BL2E5RIL1 263 aa18.19■□□□□ 0.5
HOXC11-201ENST00000243082 OR7A17O14581 309 aa18.19■□□□□ 0.5
HOXC11-201ENST00000243082 GIPC1O14908 333 aa18.19■□□□□ 0.5
HOXC11-201ENST00000243082 MESP2Q0VG99 397 aa18.19■□□□□ 0.5
HOXC11-201ENST00000243082 KIF19Q2TAC6 998 aa18.19■□□□□ 0.5
HOXC11-201ENST00000243082 TTLL9Q3SXZ7 439 aa18.19■□□□□ 0.5
HOXC11-201ENST00000243082 MMEL1Q495T6 779 aa18.19■□□□□ 0.5
HOXC11-201ENST00000243082 OGFOD2Q6N063 350 aa18.19■□□□□ 0.5
HOXC11-201ENST00000243082 ZNF366Q8N895 744 aa18.19■□□□□ 0.5
HOXC11-201ENST00000243082 KIAA1958Q8N8K9 716 aa18.19■□□□□ 0.5
HOXC11-201ENST00000243082 CDYL2Q8N8U2 506 aa18.19■□□□□ 0.5
HOXC11-201ENST00000243082 HIPK4Q8NE63 616 aa18.19■□□□□ 0.5
HOXC11-201ENST00000243082 SCAMP4Q969E2 229 aa18.19■□□□□ 0.5
HOXC11-201ENST00000243082 SPATA16Q9BXB7 569 aa18.19■□□□□ 0.5
HOXC11-201ENST00000243082 SLC8A2Q9UPR5 921 aa18.19■□□□□ 0.5
HOXC11-201ENST00000243082 SLC27A6Q9Y2P4 619 aa18.19■□□□□ 0.5
HOXC11-201ENST00000243082 NUP210Q8TEM1 1887 aaPredicted RBP18.19■□□□□ 0.5
HOXC11-201ENST00000243082 NRP2O60462 931 aa18.18■□□□□ 0.5
HOXC11-201ENST00000243082 TULP3O75386 442 aa18.18■□□□□ 0.5
HOXC11-201ENST00000243082 PAPLNO95428 1278 aa18.18■□□□□ 0.5
HOXC11-201ENST00000243082 CHEK2O96017 543 aa18.18■□□□□ 0.5
HOXC11-201ENST00000243082 ADH1CP00326 375 aa18.18■□□□□ 0.5
HOXC11-201ENST00000243082 ASLP04424 464 aa18.18■□□□□ 0.5
HOXC11-201ENST00000243082 CBSLP0DN79 551 aa18.18■□□□□ 0.5
HOXC11-201ENST00000243082 XRCC1P18887 633 aaPredicted RBP18.18■□□□□ 0.5
HOXC11-201ENST00000243082 CBSP35520 551 aa18.18■□□□□ 0.5
HOXC11-201ENST00000243082 HSPA7P48741 367 aa18.18■□□□□ 0.5
HOXC11-201ENST00000243082 PSME3P61289 254 aa18.18■□□□□ 0.5
HOXC11-201ENST00000243082 GTF2H2Q13888 395 aa18.18■□□□□ 0.5
HOXC11-201ENST00000243082 TAF11Q15544 211 aa18.18■□□□□ 0.5
HOXC11-201ENST00000243082 ZNF805Q5CZA5 627 aa18.18■□□□□ 0.5
HOXC11-201ENST00000243082 FAM78AQ5JUQ0 283 aa18.18■□□□□ 0.5
HOXC11-201ENST00000243082 GTF2H2CQ6P1K8 395 aa18.18■□□□□ 0.5
HOXC11-201ENST00000243082 SCIMPQ6UWF3 145 aa18.18■□□□□ 0.5
HOXC11-201ENST00000243082 RNF111Q6ZNA4 994 aa18.18■□□□□ 0.5
HOXC11-201ENST00000243082 KBTBD6Q86V97 674 aa18.18■□□□□ 0.5
HOXC11-201ENST00000243082 ETFBKMTQ8IXQ9 262 aa18.18■□□□□ 0.5
HOXC11-201ENST00000243082 OR2T11Q8NH01 316 aa18.18■□□□□ 0.5
HOXC11-201ENST00000243082 WFIKKN2Q8TEU8 576 aa18.18■□□□□ 0.5
HOXC11-201ENST00000243082 SAMD11Q96NU1 681 aa18.18■□□□□ 0.5
HOXC11-201ENST00000243082 APOL5Q9BWW9 433 aa18.18■□□□□ 0.5
HOXC11-201ENST00000243082 FAM83DQ9H4H8 585 aa18.18■□□□□ 0.5
HOXC11-201ENST00000243082 CERS4Q9HA82 394 aa18.18■□□□□ 0.5
HOXC11-201ENST00000243082 SDR39U1Q9NRG7 319 aaPredicted RBP18.18■□□□□ 0.5
HOXC11-201ENST00000243082 TRANK1O15050 2925 aa18.18■□□□□ 0.5
HOXC11-201ENST00000243082 NVLO15381 856 aaKnown RBP18.18■□□□□ 0.5
HOXC11-201ENST00000243082 OR56A5P0C7T3 313 aa18.18■□□□□ 0.5
HOXC11-201ENST00000243082 VCLP18206 1134 aa18.18■□□□□ 0.5
HOXC11-201ENST00000243082 NME5P56597 212 aa18.18■□□□□ 0.5
HOXC11-201ENST00000243082 Q6ZVL8 140 aa18.18■□□□□ 0.5
HOXC11-201ENST00000243082 ADGRG6Q86SQ4 1221 aa18.18■□□□□ 0.5
HOXC11-201ENST00000243082 MIER2Q8N344 545 aa18.18■□□□□ 0.5
HOXC11-201ENST00000243082 RNF148Q8N7C7 305 aa18.18■□□□□ 0.5
HOXC11-201ENST00000243082 RHBDF1Q96CC6 855 aa18.18■□□□□ 0.5
HOXC11-201ENST00000243082 ZFYVE19Q96K21 471 aa18.18■□□□□ 0.5
HOXC11-201ENST00000243082 TMEM79Q9BSE2 394 aa18.18■□□□□ 0.5
HOXC11-201ENST00000243082 RDH14Q9HBH5 336 aa18.18■□□□□ 0.5
HOXC11-201ENST00000243082 SMOXQ9NWM0 555 aa18.18■□□□□ 0.5
HOXC11-201ENST00000243082 DKK3Q9UBP4 350 aa18.18■□□□□ 0.5
HOXC11-201ENST00000243082 GPR45Q9Y5Y3 372 aa18.18■□□□□ 0.5
HOXC11-201ENST00000243082 BAG2O95816 211 aa18.17■□□□□ 0.5
HOXC11-201ENST00000243082 ME2P23368 584 aa18.17■□□□□ 0.5
HOXC11-201ENST00000243082 AOAHP28039 575 aa18.17■□□□□ 0.5
HOXC11-201ENST00000243082 MSX2P35548 267 aaPredicted RBP18.17■□□□□ 0.5
HOXC11-201ENST00000243082 ETV3P41162 512 aa18.17■□□□□ 0.5
HOXC11-201ENST00000243082 NRIP1P48552 1158 aa18.17■□□□□ 0.5
HOXC11-201ENST00000243082 GTF2A1P52655 376 aaPredicted RBP18.17■□□□□ 0.5
HOXC11-201ENST00000243082 DIO3P55073 304 aa18.17■□□□□ 0.5
HOXC11-201ENST00000243082 DCDC1P59894 354 aa18.17■□□□□ 0.5
HOXC11-201ENST00000243082 MS4A2Q01362 244 aa18.17■□□□□ 0.5
HOXC11-201ENST00000243082 RALGDSQ12967 914 aa18.17■□□□□ 0.5
HOXC11-201ENST00000243082 GBX1Q14549 363 aa18.17■□□□□ 0.5
HOXC11-201ENST00000243082 GSTA3Q16772 222 aa18.17■□□□□ 0.5
HOXC11-201ENST00000243082 SULT1C3Q6IMI6 304 aa18.17■□□□□ 0.5
HOXC11-201ENST00000243082 C8orf82Q6P1X6 216 aaPredicted RBP18.17■□□□□ 0.5
HOXC11-201ENST00000243082 SPATA19Q7Z5L4 167 aa18.17■□□□□ 0.5
HOXC11-201ENST00000243082 NPAS3Q8IXF0 933 aa18.17■□□□□ 0.5
HOXC11-201ENST00000243082 VN1R2Q8NFZ6 395 aa18.17■□□□□ 0.5
HOXC11-201ENST00000243082 LRIG1Q96JA1 1093 aa18.17■□□□□ 0.5
HOXC11-201ENST00000243082 ASB16Q96NS5 453 aa18.17■□□□□ 0.5
HOXC11-201ENST00000243082 OTOL1A6NHN0 477 aaPredicted RBP18.16■□□□□ 0.5
HOXC11-201ENST00000243082 C16orf96A6NNT2 1141 aa18.16■□□□□ 0.5
HOXC11-201ENST00000243082 PRRT4C9JH25 899 aa18.16■□□□□ 0.5
HOXC11-201ENST00000243082 E7ENX8 843 aa18.16■□□□□ 0.5
HOXC11-201ENST00000243082 MRASO14807 208 aa18.16■□□□□ 0.5
HOXC11-201ENST00000243082 MATN4O95460 622 aa18.16■□□□□ 0.5
HOXC11-201ENST00000243082 ATP1B2P14415 290 aaPredicted RBP18.16■□□□□ 0.5
HOXC11-201ENST00000243082 IDO1P14902 403 aa18.16■□□□□ 0.5
HOXC11-201ENST00000243082 SLC6A11P48066 632 aa18.16■□□□□ 0.5
HOXC11-201ENST00000243082 PSMD8P48556 350 aa18.16■□□□□ 0.5
HOXC11-201ENST00000243082 TRAF3Q13114 568 aa18.16■□□□□ 0.5
HOXC11-201ENST00000243082 DUSP6Q16828 381 aa18.16■□□□□ 0.5
HOXC11-201ENST00000243082 GAB4Q2WGN9 574 aa18.16■□□□□ 0.5
HOXC11-201ENST00000243082 POM121L1PQ3SYA9 428 aa18.16■□□□□ 0.5
HOXC11-201ENST00000243082 DET1Q7L5Y6 550 aa18.16■□□□□ 0.5
HOXC11-201ENST00000243082 OR4F6Q8NGB9 312 aa18.16■□□□□ 0.5
HOXC11-201ENST00000243082 BPIFB1Q8TDL5 484 aa18.16■□□□□ 0.5
HOXC11-201ENST00000243082 HCAR2Q8TDS4 363 aa18.16■□□□□ 0.5
HOXC11-201ENST00000243082 DNAJC9Q8WXX5 260 aa18.16■□□□□ 0.5
HOXC11-201ENST00000243082 NXPE3Q969Y0 559 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms