RNA–Protein interactions for RNA: ENST00000238688.9

SLIRP-201, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SLIRP, Length 394 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-201ENST00000238688 TXLNGQ9NUQ3 528 aa13.03□□□□□ -0.32
SLIRP-201ENST00000238688 STK38LQ9Y2H1 464 aa13.03□□□□□ -0.32
SLIRP-201ENST00000238688 PCDH15Q96QU1 1955 aa13.03□□□□□ -0.32
SLIRP-201ENST00000238688 CHD8Q9HCK8 2581 aa13.02□□□□□ -0.32
SLIRP-201ENST00000238688 GOLGA8QA0A0J9YX86 632 aa13.02□□□□□ -0.33
SLIRP-201ENST00000238688 GOLGA8OA6NCC3 632 aa13.02□□□□□ -0.33
SLIRP-201ENST00000238688 PATE3B3GLJ2 98 aa13.02□□□□□ -0.33
SLIRP-201ENST00000238688 GOLGA8NF8WBI6 632 aa13.02□□□□□ -0.33
SLIRP-201ENST00000238688 AP1G1O43747 822 aa13.02□□□□□ -0.33
SLIRP-201ENST00000238688 BNIP3LO60238 219 aa13.02□□□□□ -0.33
SLIRP-201ENST00000238688 DLX3O60479 287 aa13.02□□□□□ -0.33
SLIRP-201ENST00000238688 SBK3P0C264 359 aa13.02□□□□□ -0.33
SLIRP-201ENST00000238688 OR56A5P0C7T3 313 aa13.02□□□□□ -0.33
SLIRP-201ENST00000238688 HOXB2P14652 356 aa13.02□□□□□ -0.33
SLIRP-201ENST00000238688 IMPDH1P20839 514 aa13.02□□□□□ -0.33
SLIRP-201ENST00000238688 GKP32189 559 aa13.02□□□□□ -0.33
SLIRP-201ENST00000238688 HERVK_113P63132 956 aa13.02□□□□□ -0.33
SLIRP-201ENST00000238688 TIAL1Q01085 375 aaKnown RBP eCLIP13.02□□□□□ -0.33
SLIRP-201ENST00000238688 PPARDQ03181 441 aa13.02□□□□□ -0.33
SLIRP-201ENST00000238688 DPTQ07507 201 aa13.02□□□□□ -0.33
SLIRP-201ENST00000238688 SFSWAPQ12872 951 aaKnown RBP13.02□□□□□ -0.33
SLIRP-201ENST00000238688 DLG1Q12959 904 aa13.02□□□□□ -0.33
SLIRP-201ENST00000238688 ZNF234Q14588 700 aa13.02□□□□□ -0.33
SLIRP-201ENST00000238688 AASDHQ4L235 1098 aaPredicted RBP13.02□□□□□ -0.33
SLIRP-201ENST00000238688 LDLRAP1Q5SW96 308 aa13.02□□□□□ -0.33
SLIRP-201ENST00000238688 HENMT1Q5T8I9 393 aaKnown RBP13.02□□□□□ -0.33
SLIRP-201ENST00000238688 STPG1Q5TH74 334 aa13.02□□□□□ -0.33
SLIRP-201ENST00000238688 FOXR1Q6PIV2 292 aa13.02□□□□□ -0.33
SLIRP-201ENST00000238688 NEK10Q6ZWH5 1172 aa13.02□□□□□ -0.33
SLIRP-201ENST00000238688 TTC7BQ86TV6 843 aa13.02□□□□□ -0.33
SLIRP-201ENST00000238688 DDHD1Q8NEL9 900 aa13.02□□□□□ -0.33
SLIRP-201ENST00000238688 PIP4K2CQ8TBX8 421 aa13.02□□□□□ -0.33
SLIRP-201ENST00000238688 CD200R1Q8TD46 325 aa13.02□□□□□ -0.33
SLIRP-201ENST00000238688 GPR21Q99679 349 aa13.02□□□□□ -0.33
SLIRP-201ENST00000238688 GATA5Q9BWX5 397 aaPredicted RBP13.02□□□□□ -0.33
SLIRP-201ENST00000238688 ERVK-6Q9BXR3 956 aa13.02□□□□□ -0.33
SLIRP-201ENST00000238688 BPIFA1Q9NP55 256 aa13.02□□□□□ -0.33
SLIRP-201ENST00000238688 CD93Q9NPY3 652 aa13.02□□□□□ -0.33
SLIRP-201ENST00000238688 SPATS2LQ9NUQ6 558 aaKnown RBP13.02□□□□□ -0.33
SLIRP-201ENST00000238688 TMEM74BQ9NUR3 256 aa13.02□□□□□ -0.33
SLIRP-201ENST00000238688 ZNF358Q9NW07 568 aa13.02□□□□□ -0.33
SLIRP-201ENST00000238688 MED16Q9Y2X0 877 aa13.02□□□□□ -0.33
SLIRP-201ENST00000238688 CACNA1BQ00975 2339 aa13.01□□□□□ -0.33
SLIRP-201ENST00000238688 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.01□□□□□ -0.33
SLIRP-201ENST00000238688 LNP1A1A4G5 178 aa13.01□□□□□ -0.33
SLIRP-201ENST00000238688 KLHL33A6NCF5 533 aa13.01□□□□□ -0.33
SLIRP-201ENST00000238688 TRPC5OSA6NMA1 111 aa13.01□□□□□ -0.33
SLIRP-201ENST00000238688 AREL1O15033 823 aa13.01□□□□□ -0.33
SLIRP-201ENST00000238688 SLC22A2O15244 555 aa13.01□□□□□ -0.33
SLIRP-201ENST00000238688 KLK8O60259 260 aa13.01□□□□□ -0.33
SLIRP-201ENST00000238688 CTSLP07711 333 aa13.01□□□□□ -0.33
SLIRP-201ENST00000238688 ADRB1P08588 477 aa13.01□□□□□ -0.33
SLIRP-201ENST00000238688 C1SP09871 688 aa13.01□□□□□ -0.33
SLIRP-201ENST00000238688 ELFN1P0C7U0 828 aa13.01□□□□□ -0.33
SLIRP-201ENST00000238688 CHRM3P20309 590 aa13.01□□□□□ -0.33
SLIRP-201ENST00000238688 ADSLP30566 484 aaPredicted RBP13.01□□□□□ -0.33
SLIRP-201ENST00000238688 RPL14P50914 215 aaKnown RBP13.01□□□□□ -0.33
SLIRP-201ENST00000238688 CLCN7P51798 805 aa13.01□□□□□ -0.33
SLIRP-201ENST00000238688 CORO7P57737 925 aa13.01□□□□□ -0.33
SLIRP-201ENST00000238688 IRX4P78413 519 aa13.01□□□□□ -0.33
SLIRP-201ENST00000238688 CDC16Q13042 620 aa13.01□□□□□ -0.33
SLIRP-201ENST00000238688 CAMK2GQ13555 558 aaPredicted RBP13.01□□□□□ -0.33
SLIRP-201ENST00000238688 ZNF460Q14592 562 aa13.01□□□□□ -0.33
SLIRP-201ENST00000238688 CHRNA6Q15825 494 aa13.01□□□□□ -0.33
SLIRP-201ENST00000238688 GALNTL6Q49A17 601 aa13.01□□□□□ -0.33
SLIRP-201ENST00000238688 TMEM52BQ4KMG9 183 aa13.01□□□□□ -0.33
SLIRP-201ENST00000238688 CTSL3PQ5NE16 218 aa13.01□□□□□ -0.33
SLIRP-201ENST00000238688 SH2D4BQ5SQS7 431 aa13.01□□□□□ -0.33
SLIRP-201ENST00000238688 FBXL19Q6PCT2 694 aa13.01□□□□□ -0.33
SLIRP-201ENST00000238688 TECPR1Q7Z6L1 1165 aa13.01□□□□□ -0.33
SLIRP-201ENST00000238688 LDB1Q86U70 411 aaPredicted RBP13.01□□□□□ -0.33
SLIRP-201ENST00000238688 TSPAN33Q86UF1 283 aa13.01□□□□□ -0.33
SLIRP-201ENST00000238688 C11orf74Q86VG3 221 aa13.01□□□□□ -0.33
SLIRP-201ENST00000238688 TMEFF1Q8IYR6 380 aa13.01□□□□□ -0.33
SLIRP-201ENST00000238688 GPR26Q8NDV2 337 aa13.01□□□□□ -0.33
SLIRP-201ENST00000238688 ERLEC1Q96DZ1 483 aa13.01□□□□□ -0.33
SLIRP-201ENST00000238688 DCUN1D1Q96GG9 259 aa13.01□□□□□ -0.33
SLIRP-201ENST00000238688 ZNF514Q96K75 400 aaPredicted RBP13.01□□□□□ -0.33
SLIRP-201ENST00000238688 ATOH8Q96SQ7 321 aa13.01□□□□□ -0.33
SLIRP-201ENST00000238688 SORT1Q99523 831 aa13.01□□□□□ -0.33
SLIRP-201ENST00000238688 TMEM120AQ9BXJ8 343 aa13.01□□□□□ -0.33
SLIRP-201ENST00000238688 SLC6A17Q9H1V8 727 aa13.01□□□□□ -0.33
SLIRP-201ENST00000238688 PFDN4Q9NQP4 134 aa13.01□□□□□ -0.33
SLIRP-201ENST00000238688 CACNA2D2Q9NY47 1150 aa13.01□□□□□ -0.33
SLIRP-201ENST00000238688 CPSF2Q9P2I0 782 aaKnown RBP13.01□□□□□ -0.33
SLIRP-201ENST00000238688 SCML1Q9UN30 329 aa13.01□□□□□ -0.33
SLIRP-201ENST00000238688 SLC12A4Q9UP95 1085 aa13.01□□□□□ -0.33
SLIRP-201ENST00000238688 TNPO3Q9Y5L0 923 aaKnown RBP13.01□□□□□ -0.33
SLIRP-201ENST00000238688 LRRK1Q38SD2 2015 aa13.01□□□□□ -0.33
SLIRP-201ENST00000238688 EPG5Q9HCE0 2579 aa13.01□□□□□ -0.33
SLIRP-201ENST00000238688 A0A0G2JND7 137 aa13□□□□□ -0.33
SLIRP-201ENST00000238688 CFAP73A6NFT4 308 aa13□□□□□ -0.33
SLIRP-201ENST00000238688 A8MT66 165 aa13□□□□□ -0.33
SLIRP-201ENST00000238688 KPNA3O00505 521 aaPredicted RBP13□□□□□ -0.33
SLIRP-201ENST00000238688 CDX4O14627 284 aaPredicted RBP13□□□□□ -0.33
SLIRP-201ENST00000238688 WNT9AO14904 365 aa13□□□□□ -0.33
SLIRP-201ENST00000238688 HDAC3O15379 428 aa13□□□□□ -0.33
SLIRP-201ENST00000238688 TSPAN6O43657 245 aa13□□□□□ -0.33
SLIRP-201ENST00000238688 FSBPO95073 299 aa13□□□□□ -0.33
SLIRP-201ENST00000238688 FTH1P02794 183 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms