RNA–Protein interactions for RNA: ENST00000231130.3

PCDHB3-201, Transcript of protocadherin beta 3, humanhuman

APPRIS P1 BASIC

Gene PCDHB3, Length 3,355 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3-201ENST00000231130 MEIS3P2A8K0S8 358 aa13.99□□□□□ -0.17
PCDHB3-201ENST00000231130 EVPLLA8MZ36 301 aa13.99□□□□□ -0.17
PCDHB3-201ENST00000231130 KRT6AP02538 564 aa13.99□□□□□ -0.17
PCDHB3-201ENST00000231130 KRT6BP04259 564 aa13.99□□□□□ -0.17
PCDHB3-201ENST00000231130 IL5RAQ01344 420 aa13.99□□□□□ -0.17
PCDHB3-201ENST00000231130 SELPLGQ14242 412 aa13.99□□□□□ -0.17
PCDHB3-201ENST00000231130 OR4D1Q15615 310 aa13.99□□□□□ -0.17
PCDHB3-201ENST00000231130 MFSD4AQ8N468 514 aa13.99□□□□□ -0.17
PCDHB3-201ENST00000231130 CDYL2Q8N8U2 506 aa13.99□□□□□ -0.17
PCDHB3-201ENST00000231130 GALNT6Q8NCL4 622 aa13.99□□□□□ -0.17
PCDHB3-201ENST00000231130 SCAMP5Q8TAC9 235 aa13.99□□□□□ -0.17
PCDHB3-201ENST00000231130 JPH3Q8WXH2 748 aaPredicted RBP13.99□□□□□ -0.17
PCDHB3-201ENST00000231130 NCLNQ969V3 563 aa13.99□□□□□ -0.17
PCDHB3-201ENST00000231130 TSPAN17Q96FV3 270 aa13.99□□□□□ -0.17
PCDHB3-201ENST00000231130 CCDC120Q96HB5 630 aa13.99□□□□□ -0.17
PCDHB3-201ENST00000231130 THUMPD3Q9BV44 507 aaKnown RBP13.99□□□□□ -0.17
PCDHB3-201ENST00000231130 PCDH10Q9P2E7 1040 aa13.99□□□□□ -0.17
PCDHB3-201ENST00000231130 LIMD1Q9UGP4 676 aa13.99□□□□□ -0.17
PCDHB3-201ENST00000231130 PCM1Q15154 2024 aa13.98□□□□□ -0.17
PCDHB3-201ENST00000231130 PHIPQ8WWQ0 1821 aa13.98□□□□□ -0.17
PCDHB3-201ENST00000231130 TSC22D2O75157 780 aa13.98□□□□□ -0.17
PCDHB3-201ENST00000231130 HSD17B1P14061 328 aa13.98□□□□□ -0.17
PCDHB3-201ENST00000231130 PIGAP37287 484 aa13.98□□□□□ -0.17
PCDHB3-201ENST00000231130 SLC26A2P50443 739 aa13.98□□□□□ -0.17
PCDHB3-201ENST00000231130 HERVK_113P63132 956 aa13.98□□□□□ -0.17
PCDHB3-201ENST00000231130 GALK2Q01415 458 aa13.98□□□□□ -0.17
PCDHB3-201ENST00000231130 DSC2Q02487 901 aa13.98□□□□□ -0.17
PCDHB3-201ENST00000231130 CHRNB3Q05901 458 aa13.98□□□□□ -0.17
PCDHB3-201ENST00000231130 LYSMD2Q8IV50 215 aa13.98□□□□□ -0.17
PCDHB3-201ENST00000231130 MINDY1Q8N5J2 469 aa13.98□□□□□ -0.17
PCDHB3-201ENST00000231130 CNIH3Q8TBE1 160 aa13.98□□□□□ -0.17
PCDHB3-201ENST00000231130 SLC22A17Q8WUG5 538 aa13.98□□□□□ -0.17
PCDHB3-201ENST00000231130 ERVK-6Q9BXR3 956 aa13.98□□□□□ -0.17
PCDHB3-201ENST00000231130 CRTAC1Q9NQ79 661 aa13.98□□□□□ -0.17
PCDHB3-201ENST00000231130 FKBP14Q9NWM8 211 aa13.98□□□□□ -0.17
PCDHB3-201ENST00000231130 KATNA1O75449 491 aa13.98□□□□□ -0.17
PCDHB3-201ENST00000231130 S100A5P33763 92 aa13.98□□□□□ -0.17
PCDHB3-201ENST00000231130 FCHO2Q0JRZ9 810 aa13.98□□□□□ -0.17
PCDHB3-201ENST00000231130 SKIV2LQ15477 1246 aaKnown RBP13.98□□□□□ -0.17
PCDHB3-201ENST00000231130 PRMT9Q6P2P2 845 aa13.98□□□□□ -0.17
PCDHB3-201ENST00000231130 NOTUMQ6P988 496 aa13.98□□□□□ -0.17
PCDHB3-201ENST00000231130 P2RY8Q86VZ1 359 aa13.98□□□□□ -0.17
PCDHB3-201ENST00000231130 PIK3R3Q92569 461 aa13.98□□□□□ -0.17
PCDHB3-201ENST00000231130 NT5C3BQ969T7 300 aa13.98□□□□□ -0.17
PCDHB3-201ENST00000231130 DUS3LQ96G46 650 aaKnown RBP13.98□□□□□ -0.17
PCDHB3-201ENST00000231130 FEM1AQ9BSK4 669 aa13.98□□□□□ -0.17
PCDHB3-201ENST00000231130 INTS10Q9NVR2 710 aaKnown RBP13.98□□□□□ -0.17
PCDHB3-201ENST00000231130 RNF112Q9ULX5 631 aa13.98□□□□□ -0.17
PCDHB3-201ENST00000231130 ZNF99A8MXY4 864 aaPredicted RBP13.97□□□□□ -0.17
PCDHB3-201ENST00000231130 STAU1O95793 577 aaKnown RBP13.97□□□□□ -0.17
PCDHB3-201ENST00000231130 CST1P01037 141 aa13.97□□□□□ -0.17
PCDHB3-201ENST00000231130 AFF1P51825 1210 aaKnown RBP13.97□□□□□ -0.17
PCDHB3-201ENST00000231130 DEFA1P59665 94 aa13.97□□□□□ -0.17
PCDHB3-201ENST00000231130 DEFA3P59666 94 aa13.97□□□□□ -0.17
PCDHB3-201ENST00000231130 EPS8Q12929 822 aa13.97□□□□□ -0.17
PCDHB3-201ENST00000231130 SIM2Q14190 667 aaPredicted RBP13.97□□□□□ -0.17
PCDHB3-201ENST00000231130 ARHGEF6Q15052 776 aa13.97□□□□□ -0.17
PCDHB3-201ENST00000231130 KYAT1Q16773 422 aa13.97□□□□□ -0.17
PCDHB3-201ENST00000231130 BLOC1S3Q6QNY0 202 aa13.97□□□□□ -0.17
PCDHB3-201ENST00000231130 SLC22A15Q8IZD6 547 aa13.97□□□□□ -0.17
PCDHB3-201ENST00000231130 FRS2Q8WU20 508 aa13.97□□□□□ -0.17
PCDHB3-201ENST00000231130 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.97□□□□□ -0.17
PCDHB3-201ENST00000231130 WBP11Q9Y2W2 641 aaKnown RBP13.97□□□□□ -0.17
PCDHB3-201ENST00000231130 IPPQ9Y573 584 aa13.97□□□□□ -0.17
PCDHB3-201ENST00000231130 PCDHA9Q9Y5H5 950 aa13.97□□□□□ -0.17
PCDHB3-201ENST00000231130 BBIP1A8MTZ0 92 aa13.97□□□□□ -0.17
PCDHB3-201ENST00000231130 G3V2T6 193 aa13.97□□□□□ -0.17
PCDHB3-201ENST00000231130 UPK1BO75841 260 aa13.97□□□□□ -0.17
PCDHB3-201ENST00000231130 CYBBP04839 570 aa13.97□□□□□ -0.17
PCDHB3-201ENST00000231130 PRKACAP17612 351 aa13.97□□□□□ -0.17
PCDHB3-201ENST00000231130 CRHBPP24387 322 aa13.97□□□□□ -0.17
PCDHB3-201ENST00000231130 GSTM2P28161 218 aa13.97□□□□□ -0.17
PCDHB3-201ENST00000231130 PIK3CGP48736 1102 aa13.97□□□□□ -0.17
PCDHB3-201ENST00000231130 CSRP3P50461 194 aa13.97□□□□□ -0.17
PCDHB3-201ENST00000231130 TRAF3Q13114 568 aa13.97□□□□□ -0.17
PCDHB3-201ENST00000231130 SEMA3BQ13214 749 aa13.97□□□□□ -0.17
PCDHB3-201ENST00000231130 ATP6AP1LQ52LC2 224 aa13.97□□□□□ -0.17
PCDHB3-201ENST00000231130 MILR1Q7Z6M3 343 aa13.97□□□□□ -0.17
PCDHB3-201ENST00000231130 YTHDF1Q9BYJ9 559 aaKnown RBP13.97□□□□□ -0.17
PCDHB3-201ENST00000231130 C14orf119Q9NWQ9 140 aa13.97□□□□□ -0.17
PCDHB3-201ENST00000231130 GALPQ9UBC7 116 aa13.97□□□□□ -0.17
PCDHB3-201ENST00000231130 PIRO00625 290 aa13.97□□□□□ -0.17
PCDHB3-201ENST00000231130 AP3D1O14617 1153 aa13.97□□□□□ -0.17
PCDHB3-201ENST00000231130 SCO2O43819 266 aa13.97□□□□□ -0.17
PCDHB3-201ENST00000231130 SLC22A3O75751 556 aa13.97□□□□□ -0.17
PCDHB3-201ENST00000231130 FTH1P02794 183 aa13.97□□□□□ -0.17
PCDHB3-201ENST00000231130 FMO3P31513 532 aa13.97□□□□□ -0.17
PCDHB3-201ENST00000231130 CLCN5P51795 746 aa13.97□□□□□ -0.17
PCDHB3-201ENST00000231130 ADARB1P78563 741 aaKnown RBP13.97□□□□□ -0.17
PCDHB3-201ENST00000231130 GPLD1P80108 840 aa13.97□□□□□ -0.17
PCDHB3-201ENST00000231130 DAG1Q14118 895 aa13.97□□□□□ -0.17
PCDHB3-201ENST00000231130 NFE2Q16621 373 aaPredicted RBP13.97□□□□□ -0.17
PCDHB3-201ENST00000231130 DCAF4L1Q3SXM0 396 aa13.97□□□□□ -0.17
PCDHB3-201ENST00000231130 TRIM60Q495X7 471 aa13.97□□□□□ -0.17
PCDHB3-201ENST00000231130 SV2CQ496J9 727 aa13.97□□□□□ -0.17
PCDHB3-201ENST00000231130 C8orf82Q6P1X6 216 aaPredicted RBP13.97□□□□□ -0.17
PCDHB3-201ENST00000231130 ENPP6Q6UWR7 440 aa13.97□□□□□ -0.17
PCDHB3-201ENST00000231130 SLC16A12Q6ZSM3 486 aa13.97□□□□□ -0.17
PCDHB3-201ENST00000231130 CILP2Q8IUL8 1156 aa13.97□□□□□ -0.17
PCDHB3-201ENST00000231130 FBXO39Q8N4B4 442 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms