RNA–Protein interactions for RNA: ENST00000225576.7

TVP23C-201, Transcript of trans-golgi network vesicle protein 23 homolog C, humanhuman

TSL 1 (best) BASIC

Gene TVP23C, Length 1,527 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-201ENST00000225576 PELI3Q8N2H9 469 aa16.51■□□□□ 0.23
TVP23C-201ENST00000225576 PDPRQ8NCN5 879 aa16.51■□□□□ 0.23
TVP23C-201ENST00000225576 MAPK15Q8TD08 544 aa16.51■□□□□ 0.23
TVP23C-201ENST00000225576 TUBB6Q9BUF5 446 aa16.51■□□□□ 0.23
TVP23C-201ENST00000225576 NMUR2Q9GZQ4 415 aa16.51■□□□□ 0.23
TVP23C-201ENST00000225576 MKRN2Q9H000 416 aaKnown RBP16.51■□□□□ 0.23
TVP23C-201ENST00000225576 CD248Q9HCU0 757 aa16.51■□□□□ 0.23
TVP23C-201ENST00000225576 SCML1Q9UN30 329 aa16.51■□□□□ 0.23
TVP23C-201ENST00000225576 TNPO3Q9Y5L0 923 aaKnown RBP16.51■□□□□ 0.23
TVP23C-201ENST00000225576 CKAP5Q14008 2032 aa16.51■□□□□ 0.23
TVP23C-201ENST00000225576 NCF1BA6NI72 391 aaPredicted RBP16.5■□□□□ 0.23
TVP23C-201ENST00000225576 TRPC5OSA6NMA1 111 aa16.5■□□□□ 0.23
TVP23C-201ENST00000225576 NCF1CA8MVU1 366 aaPredicted RBP16.5■□□□□ 0.23
TVP23C-201ENST00000225576 UBFD1O14562 309 aaKnown RBP16.5■□□□□ 0.23
TVP23C-201ENST00000225576 FFAR2O15552 330 aa16.5■□□□□ 0.23
TVP23C-201ENST00000225576 ATG13O75143 517 aa16.5■□□□□ 0.23
TVP23C-201ENST00000225576 GPC4O75487 556 aa16.5■□□□□ 0.23
TVP23C-201ENST00000225576 RNASEH2AO75792 299 aaKnown RBP16.5■□□□□ 0.23
TVP23C-201ENST00000225576 S100BP04271 92 aaPredicted RBP16.5■□□□□ 0.23
TVP23C-201ENST00000225576 FGF4P08620 206 aa16.5■□□□□ 0.23
TVP23C-201ENST00000225576 NCF1P14598 390 aaPredicted RBP16.5■□□□□ 0.23
TVP23C-201ENST00000225576 CDH13P55290 713 aa16.5■□□□□ 0.23
TVP23C-201ENST00000225576 CLCQ05315 142 aa16.5■□□□□ 0.23
TVP23C-201ENST00000225576 ACTN3Q08043 901 aaPredicted RBP16.5■□□□□ 0.23
TVP23C-201ENST00000225576 HSPA14Q0VDF9 509 aa16.5■□□□□ 0.23
TVP23C-201ENST00000225576 KRT72Q14CN4 511 aa16.5■□□□□ 0.23
TVP23C-201ENST00000225576 PCBP2Q15366 365 aaKnown RBP eCLIP16.5■□□□□ 0.238e-11■□□□□ 8.8
TVP23C-201ENST00000225576 CDKL4Q5MAI5 379 aa16.5■□□□□ 0.23
TVP23C-201ENST00000225576 VWA5B1Q5TIE3 1220 aa16.5■□□□□ 0.23
TVP23C-201ENST00000225576 TMPRSS6Q8IU80 811 aa16.5■□□□□ 0.23
TVP23C-201ENST00000225576 DEFB123Q8N688 67 aa16.5■□□□□ 0.23
TVP23C-201ENST00000225576 ZNF483Q8TF39 744 aaPredicted RBP16.5■□□□□ 0.23
TVP23C-201ENST00000225576 ASZ1Q8WWH4 475 aa16.5■□□□□ 0.23
TVP23C-201ENST00000225576 ELMO1Q92556 727 aa16.5■□□□□ 0.23
TVP23C-201ENST00000225576 TRIM39Q9HCM9 518 aa16.5■□□□□ 0.23
TVP23C-201ENST00000225576 TXLNGQ9NUQ3 528 aa16.5■□□□□ 0.23
TVP23C-201ENST00000225576 SERGEFQ9UGK8 458 aa16.5■□□□□ 0.23
TVP23C-201ENST00000225576 ADAMTS6Q9UKP5 1117 aa16.5■□□□□ 0.23
TVP23C-201ENST00000225576 IGLON5A6NGN9 336 aa16.5■□□□□ 0.23
TVP23C-201ENST00000225576 LRRC14BA6NHZ5 514 aa16.5■□□□□ 0.23
TVP23C-201ENST00000225576 OR2AG2A6NM03 316 aa16.5■□□□□ 0.23
TVP23C-201ENST00000225576 K7ESM1 405 aa16.5■□□□□ 0.23
TVP23C-201ENST00000225576 CDK14O94921 469 aa16.5■□□□□ 0.23
TVP23C-201ENST00000225576 SLCO2B1O94956 709 aa16.5■□□□□ 0.23
TVP23C-201ENST00000225576 UNC5CO95185 931 aa16.5■□□□□ 0.23
TVP23C-201ENST00000225576 PCDH8O95206 1070 aa16.5■□□□□ 0.23
TVP23C-201ENST00000225576 DNTTP04053 509 aa16.5■□□□□ 0.23
TVP23C-201ENST00000225576 ASGR2P07307 311 aa16.5■□□□□ 0.23
TVP23C-201ENST00000225576 C8GP07360 202 aa16.5■□□□□ 0.23
TVP23C-201ENST00000225576 ENO2P09104 434 aaPredicted RBP16.5■□□□□ 0.23
TVP23C-201ENST00000225576 VCLP18206 1134 aa16.5■□□□□ 0.23
TVP23C-201ENST00000225576 CTSCP53634 463 aa16.5■□□□□ 0.23
TVP23C-201ENST00000225576 BCL7AQ4VC05 210 aa16.5■□□□□ 0.23
TVP23C-201ENST00000225576 SLC9B1Q4ZJI4 515 aa16.5■□□□□ 0.23
TVP23C-201ENST00000225576 TMEM220Q6QAJ8 160 aa16.5■□□□□ 0.23
TVP23C-201ENST00000225576 ADAMTSL4Q6UY14 1074 aa16.5■□□□□ 0.23
TVP23C-201ENST00000225576 Q7L0L9 218 aa16.5■□□□□ 0.23
TVP23C-201ENST00000225576 CACUL1Q86Y37 369 aa16.5■□□□□ 0.23
TVP23C-201ENST00000225576 CLYBLQ8N0X4 340 aa16.5■□□□□ 0.23
TVP23C-201ENST00000225576 HLA-CQ95604 372 aa16.5■□□□□ 0.23
TVP23C-201ENST00000225576 CCM2Q9BSQ5 444 aa16.5■□□□□ 0.23
TVP23C-201ENST00000225576 CCDC28BQ9BUN5 200 aa16.5■□□□□ 0.23
TVP23C-201ENST00000225576 SLC2A4RGQ9NR83 387 aa16.5■□□□□ 0.23
TVP23C-201ENST00000225576 FBXL12Q9NXK8 326 aa16.5■□□□□ 0.23
TVP23C-201ENST00000225576 UTP6Q9NYH9 597 aaKnown RBP16.5■□□□□ 0.23
TVP23C-201ENST00000225576 TSR3Q9UJK0 312 aaKnown RBP16.5■□□□□ 0.23
TVP23C-201ENST00000225576 PTBP2Q9UKA9 531 aaKnown RBP16.5■□□□□ 0.23
TVP23C-201ENST00000225576 PCTPQ9UKL6 214 aa16.5■□□□□ 0.23
TVP23C-201ENST00000225576 CDYLQ9Y232 598 aa16.5■□□□□ 0.23
TVP23C-201ENST00000225576 TRAF6Q9Y4K3 522 aa16.5■□□□□ 0.23
TVP23C-201ENST00000225576 SHISA7A6NL88 538 aa16.49■□□□□ 0.23
TVP23C-201ENST00000225576 SLC16A5O15375 505 aa16.49■□□□□ 0.23
TVP23C-201ENST00000225576 PLRG1O43660 514 aaKnown RBP16.49■□□□□ 0.23
TVP23C-201ENST00000225576 VEGFDO43915 354 aa16.49■□□□□ 0.23
TVP23C-201ENST00000225576 FSBPO95073 299 aa16.49■□□□□ 0.23
TVP23C-201ENST00000225576 MLYCDO95822 493 aa16.49■□□□□ 0.23
TVP23C-201ENST00000225576 T-ENOLP0DO92 83 aa16.49■□□□□ 0.23
TVP23C-201ENST00000225576 SRFP11831 508 aa16.49■□□□□ 0.23
TVP23C-201ENST00000225576 COL9A1P20849 921 aa16.49■□□□□ 0.23
TVP23C-201ENST00000225576 AGTR2P50052 363 aa16.49■□□□□ 0.23
TVP23C-201ENST00000225576 SH3BP2P78314 561 aa16.49■□□□□ 0.23
TVP23C-201ENST00000225576 LCP2Q13094 533 aa16.49■□□□□ 0.23
TVP23C-201ENST00000225576 SP140Q13342 867 aa16.49■□□□□ 0.23
TVP23C-201ENST00000225576 BOP1Q14137 746 aaKnown RBP16.49■□□□□ 0.23
TVP23C-201ENST00000225576 TBCCQ15814 346 aa16.49■□□□□ 0.23
TVP23C-201ENST00000225576 PHKG1Q16816 387 aa16.49■□□□□ 0.23
TVP23C-201ENST00000225576 IER5LQ5T953 404 aa16.49■□□□□ 0.23
TVP23C-201ENST00000225576 SULT1C3Q6IMI6 304 aa16.49■□□□□ 0.23
TVP23C-201ENST00000225576 METTL2BQ6P1Q9 378 aaKnown RBP16.49■□□□□ 0.23
TVP23C-201ENST00000225576 PNCKQ6P2M8 343 aa16.49■□□□□ 0.23
TVP23C-201ENST00000225576 ADGRG6Q86SQ4 1221 aa16.49■□□□□ 0.23
TVP23C-201ENST00000225576 BEND7Q8N7W2 519 aaPredicted RBP16.49■□□□□ 0.23
TVP23C-201ENST00000225576 ASB11Q8WXH4 323 aa16.49■□□□□ 0.23
TVP23C-201ENST00000225576 FAM3CQ92520 227 aa16.49■□□□□ 0.23
TVP23C-201ENST00000225576 DLG3Q92796 817 aa16.49■□□□□ 0.23
TVP23C-201ENST00000225576 HIC2Q96JB3 615 aa16.49■□□□□ 0.23
TVP23C-201ENST00000225576 MAELQ96JY0 434 aaKnown RBP16.49■□□□□ 0.23
TVP23C-201ENST00000225576 ZNF514Q96K75 400 aaPredicted RBP16.49■□□□□ 0.23
TVP23C-201ENST00000225576 NSUN5Q96P11 429 aaKnown RBP16.49■□□□□ 0.23
TVP23C-201ENST00000225576 CDX2Q99626 313 aaPredicted RBP16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms