RNA–Protein interactions for RNA: ENST00000219084.10

CHD9-201, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best)

Gene CHD9, Length 8,739 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-201ENST00000219084 RMI1Q9H9A7 625 aa4.36□□□□□ -1.71
CHD9-201ENST00000219084 MAGED1Q9Y5V3 778 aaPredicted RBP4.36□□□□□ -1.71
CHD9-201ENST00000219084 ZNF879B4DU55 563 aa4.36□□□□□ -1.71
CHD9-201ENST00000219084 E7ENX8 843 aa4.36□□□□□ -1.71
CHD9-201ENST00000219084 E9PAM4 449 aa4.36□□□□□ -1.71
CHD9-201ENST00000219084 PRMT3O60678 531 aa4.36□□□□□ -1.71
CHD9-201ENST00000219084 S100A6P06703 90 aa4.36□□□□□ -1.71
CHD9-201ENST00000219084 PKMP14618 531 aaKnown RBP4.36□□□□□ -1.71
CHD9-201ENST00000219084 PRPS1L1P21108 318 aa4.36□□□□□ -1.71
CHD9-201ENST00000219084 EPHX2P34913 555 aa4.36□□□□□ -1.71
CHD9-201ENST00000219084 CXCR3P49682 368 aa4.36□□□□□ -1.71
CHD9-201ENST00000219084 AP1S2P56377 157 aa4.36□□□□□ -1.71
CHD9-201ENST00000219084 GSTM4Q03013 218 aa4.36□□□□□ -1.71
CHD9-201ENST00000219084 SCRN3Q0VDG4 424 aa4.36□□□□□ -1.71
CHD9-201ENST00000219084 MERTKQ12866 999 aa4.36□□□□□ -1.71
CHD9-201ENST00000219084 E2F2Q14209 437 aa4.36□□□□□ -1.71
CHD9-201ENST00000219084 CBX2Q14781 532 aaPredicted RBP4.36□□□□□ -1.71
CHD9-201ENST00000219084 GPR33Q49SQ1 333 aa4.36□□□□□ -1.71
CHD9-201ENST00000219084 IQCCQ4KMZ1 466 aa4.36□□□□□ -1.71
CHD9-201ENST00000219084 SEZ6Q53EL9 994 aa4.36□□□□□ -1.71
CHD9-201ENST00000219084 GPAT3Q53EU6 434 aa4.36□□□□□ -1.71
CHD9-201ENST00000219084 ARL13AQ5H913 290 aaPredicted RBP4.36□□□□□ -1.71
CHD9-201ENST00000219084 RPL13AP3Q6NVV1 102 aa4.36□□□□□ -1.71
CHD9-201ENST00000219084 ZNF773Q6PK81 442 aa4.36□□□□□ -1.71
CHD9-201ENST00000219084 ZNF730Q6ZMV8 503 aa4.36□□□□□ -1.71
CHD9-201ENST00000219084 SPAG16Q8N0X2 631 aa4.36□□□□□ -1.71
CHD9-201ENST00000219084 MOAP1Q96BY2 351 aa4.36□□□□□ -1.71
CHD9-201ENST00000219084 ZBED6CLQ96FA7 236 aaPredicted RBP4.36□□□□□ -1.71
CHD9-201ENST00000219084 LGMNQ99538 433 aa4.36□□□□□ -1.71
CHD9-201ENST00000219084 GBA2Q9HCG7 927 aaPredicted RBP4.36□□□□□ -1.71
CHD9-201ENST00000219084 TMEM138Q9NPI0 162 aa4.36□□□□□ -1.71
CHD9-201ENST00000219084 RASSF1Q9NS23 344 aa4.36□□□□□ -1.71
CHD9-201ENST00000219084 PNMA8BQ9ULN7 279 aaPredicted RBP4.36□□□□□ -1.71
CHD9-201ENST00000219084 SLC45A1Q9Y2W3 748 aa4.36□□□□□ -1.71
CHD9-201ENST00000219084 PCDHGA4Q9Y5G9 962 aa4.36□□□□□ -1.71
CHD9-201ENST00000219084 GLYATL1P3A0A0U1RQE8 302 aa4.36□□□□□ -1.71
CHD9-201ENST00000219084 PLOD2O00469 737 aa4.36□□□□□ -1.71
CHD9-201ENST00000219084 DENRO43583 198 aaKnown RBP4.36□□□□□ -1.71
CHD9-201ENST00000219084 TRIM3O75382 744 aaPredicted RBP4.36□□□□□ -1.71
CHD9-201ENST00000219084 METTL18O95568 372 aa4.36□□□□□ -1.71
CHD9-201ENST00000219084 DBTP11182 482 aaKnown RBP4.36□□□□□ -1.71
CHD9-201ENST00000219084 SOX11P35716 441 aa4.36□□□□□ -1.71
CHD9-201ENST00000219084 RBM34P42696 430 aaKnown RBP4.36□□□□□ -1.71
CHD9-201ENST00000219084 ALDH3A2P51648 485 aa4.36□□□□□ -1.71
CHD9-201ENST00000219084 CBX3Q13185 183 aa4.36□□□□□ -1.71
CHD9-201ENST00000219084 PTPN20Q4JDL3 420 aa4.36□□□□□ -1.71
CHD9-201ENST00000219084 KHDC1Q4VXA5 237 aaKnown RBP4.36□□□□□ -1.71
CHD9-201ENST00000219084 MPPE1Q53F39 396 aa4.36□□□□□ -1.71
CHD9-201ENST00000219084 PPM1LQ5SGD2 360 aa4.36□□□□□ -1.71
CHD9-201ENST00000219084 HPS6Q86YV9 775 aa4.36□□□□□ -1.71
CHD9-201ENST00000219084 PLD6Q8N2A8 252 aaKnown RBP4.36□□□□□ -1.71
CHD9-201ENST00000219084 POMGNT2Q8NAT1 580 aa4.36□□□□□ -1.71
CHD9-201ENST00000219084 EFHD2Q96C19 240 aaPredicted RBP4.36□□□□□ -1.71
CHD9-201ENST00000219084 RHBDF1Q96CC6 855 aa4.36□□□□□ -1.71
CHD9-201ENST00000219084 SNX27Q96L92 541 aa4.36□□□□□ -1.71
CHD9-201ENST00000219084 NSMCE3Q96MG7 304 aa4.36□□□□□ -1.71
CHD9-201ENST00000219084 CLCC1Q96S66 551 aa4.36□□□□□ -1.71
CHD9-201ENST00000219084 CPXM1Q96SM3 734 aa4.36□□□□□ -1.71
CHD9-201ENST00000219084 MECRQ9BV79 373 aa4.36□□□□□ -1.71
CHD9-201ENST00000219084 SLC2A11Q9BYW1 496 aa4.36□□□□□ -1.71
CHD9-201ENST00000219084 CAB39LQ9H9S4 337 aa4.36□□□□□ -1.71
CHD9-201ENST00000219084 NEUROD4Q9HD90 331 aa4.36□□□□□ -1.71
CHD9-201ENST00000219084 DDX4Q9NQI0 724 aaKnown RBP4.36□□□□□ -1.71
CHD9-201ENST00000219084 MRPL17Q9NRX2 175 aaKnown RBP4.36□□□□□ -1.71
CHD9-201ENST00000219084 FBXW11Q9UKB1 542 aa4.36□□□□□ -1.71
CHD9-201ENST00000219084 CARD8Q9Y2G2 431 aa4.36□□□□□ -1.71
CHD9-201ENST00000219084 PCDHGA11Q9Y5H2 935 aa4.36□□□□□ -1.71
CHD9-201ENST00000219084 PCDHA2Q9Y5H9 948 aa4.36□□□□□ -1.71
CHD9-201ENST00000219084 ST14Q9Y5Y6 855 aa4.36□□□□□ -1.71
CHD9-201ENST00000219084 TEX264Q9Y6I9 313 aa4.36□□□□□ -1.71
CHD9-201ENST00000219084 SLC28A2O43868 658 aa4.36□□□□□ -1.71
CHD9-201ENST00000219084 FADS2O95864 444 aaKnown RBP4.36□□□□□ -1.71
CHD9-201ENST00000219084 POMCP01189 267 aa4.36□□□□□ -1.71
CHD9-201ENST00000219084 HMGN1P05114 100 aa4.36□□□□□ -1.71
CHD9-201ENST00000219084 TACSTD2P09758 323 aa4.36□□□□□ -1.71
CHD9-201ENST00000219084 MAPK3P27361 379 aaPredicted RBP4.36□□□□□ -1.71
CHD9-201ENST00000219084 SLC6A4P31645 630 aa4.36□□□□□ -1.71
CHD9-201ENST00000219084 USP4Q13107 963 aa4.36□□□□□ -1.71
CHD9-201ENST00000219084 PWP1Q13610 501 aa4.36□□□□□ -1.71
CHD9-201ENST00000219084 SMU1Q2TAY7 513 aa4.36□□□□□ -1.71
CHD9-201ENST00000219084 ALFQ53S48 1182 aa4.36□□□□□ -1.71
CHD9-201ENST00000219084 IRAK1BP1Q5VVH5 260 aa4.36□□□□□ -1.71
CHD9-201ENST00000219084 SLC25A24Q6NUK1 477 aa4.36□□□□□ -1.71
CHD9-201ENST00000219084 DNAJC14Q6Y2X3 702 aaPredicted RBP4.36□□□□□ -1.71
CHD9-201ENST00000219084 FRMD7Q6ZUT3 714 aa4.36□□□□□ -1.71
CHD9-201ENST00000219084 AMIGO2Q86SJ2 522 aa4.36□□□□□ -1.71
CHD9-201ENST00000219084 HDAC2Q92769 488 aaKnown RBP4.36□□□□□ -1.71
CHD9-201ENST00000219084 AZIN2Q96A70 460 aa4.36□□□□□ -1.71
CHD9-201ENST00000219084 DIRAS2Q96HU8 199 aa4.36□□□□□ -1.71
CHD9-201ENST00000219084 OR2B2Q9GZK3 357 aa4.36□□□□□ -1.71
CHD9-201ENST00000219084 COMMD4Q9H0A8 199 aa4.36□□□□□ -1.71
CHD9-201ENST00000219084 MMP27Q9H306 513 aa4.36□□□□□ -1.71
CHD9-201ENST00000219084 SGK2Q9HBY8 427 aa4.36□□□□□ -1.71
CHD9-201ENST00000219084 ITM2CQ9NQX7 267 aa4.36□□□□□ -1.71
CHD9-201ENST00000219084 ARHGEF4Q9NR80 690 aa4.36□□□□□ -1.71
CHD9-201ENST00000219084 PNPOQ9NVS9 261 aa4.36□□□□□ -1.71
CHD9-201ENST00000219084 GTF2A1LQ9UNN4 478 aa4.36□□□□□ -1.71
CHD9-201ENST00000219084 TLR6Q9Y2C9 796 aa4.36□□□□□ -1.71
CHD9-201ENST00000219084 NPEPPSL1A6NEC2 478 aa4.36□□□□□ -1.71
CHD9-201ENST00000219084 PDHXO00330 501 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms