RNA–Protein interactions for RNA: ENST00000212355.8

TGFBR3-201, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TGFBR3, Length 6,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-201ENST00000212355 DNTTP04053 509 aa13.46□□□□□ -0.25
TGFBR3-201ENST00000212355 UGT1A6P19224 532 aa13.46□□□□□ -0.25
TGFBR3-201ENST00000212355 UGT1A1P22309 533 aa13.46□□□□□ -0.25
TGFBR3-201ENST00000212355 UGT1A4P22310 534 aa13.46□□□□□ -0.25
TGFBR3-201ENST00000212355 UGT1A3P35503 534 aa13.46□□□□□ -0.25
TGFBR3-201ENST00000212355 UGT1A5P35504 534 aa13.46□□□□□ -0.25
TGFBR3-201ENST00000212355 AVPR1BP47901 424 aa13.46□□□□□ -0.25
TGFBR3-201ENST00000212355 ROR2Q01974 943 aaKnown RBP13.46□□□□□ -0.25
TGFBR3-201ENST00000212355 MAGEL2Q9UJ55 1249 aa13.46□□□□□ -0.25
TGFBR3-201ENST00000212355 YJEFN3A6XGL0 299 aa13.46□□□□□ -0.25
TGFBR3-201ENST00000212355 RGS10O43665 173 aa13.46□□□□□ -0.25
TGFBR3-201ENST00000212355 VNN1O95497 513 aa13.46□□□□□ -0.25
TGFBR3-201ENST00000212355 AP2A1O95782 977 aa13.46□□□□□ -0.25
TGFBR3-201ENST00000212355 ITGB1P05556 798 aa13.46□□□□□ -0.25
TGFBR3-201ENST00000212355 FAM174BQ3ZCQ3 159 aa13.46□□□□□ -0.25
TGFBR3-201ENST00000212355 LYPLAL1Q5VWZ2 237 aa13.46□□□□□ -0.25
TGFBR3-201ENST00000212355 USP50Q70EL3 339 aaPredicted RBP13.46□□□□□ -0.25
TGFBR3-201ENST00000212355 IQCHQ86VS3 1027 aa13.46□□□□□ -0.25
TGFBR3-201ENST00000212355 TMEM130Q8N3G9 435 aa13.46□□□□□ -0.25
TGFBR3-201ENST00000212355 SDCBP2Q9H190 292 aa13.46□□□□□ -0.25
TGFBR3-201ENST00000212355 DSN1Q9H410 356 aa13.46□□□□□ -0.25
TGFBR3-201ENST00000212355 CORO2BQ9UQ03 480 aa13.46□□□□□ -0.25
TGFBR3-201ENST00000212355 GIT1Q9Y2X7 761 aa13.46□□□□□ -0.25
TGFBR3-201ENST00000212355 CLUHO75153 1309 aa13.46□□□□□ -0.25
TGFBR3-201ENST00000212355 ATP6V0D1P61421 351 aa13.46□□□□□ -0.26
TGFBR3-201ENST00000212355 SYPL2Q5VXT5 272 aa13.46□□□□□ -0.26
TGFBR3-201ENST00000212355 DEFB119Q8N690 84 aa13.46□□□□□ -0.26
TGFBR3-201ENST00000212355 PJA1Q8NG27 643 aa13.46□□□□□ -0.26
TGFBR3-201ENST00000212355 CYB5D2Q8WUJ1 264 aa13.46□□□□□ -0.26
TGFBR3-201ENST00000212355 ZNF516Q92618 1163 aa13.46□□□□□ -0.26
TGFBR3-201ENST00000212355 SLC2A6Q9UGQ3 507 aa13.46□□□□□ -0.26
TGFBR3-201ENST00000212355 PLAGL1Q9UM63 463 aa13.46□□□□□ -0.26
TGFBR3-201ENST00000212355 ING4Q9UNL4 249 aa13.46□□□□□ -0.26
TGFBR3-201ENST00000212355 A8MUA0 341 aa13.45□□□□□ -0.26
TGFBR3-201ENST00000212355 BTBD19C9JJ37 291 aa13.45□□□□□ -0.26
TGFBR3-201ENST00000212355 ZNF432O94892 652 aa13.45□□□□□ -0.26
TGFBR3-201ENST00000212355 GLUD1P00367 558 aa13.45□□□□□ -0.26
TGFBR3-201ENST00000212355 SMPD1P17405 629 aa13.45□□□□□ -0.26
TGFBR3-201ENST00000212355 TRAP1Q12931 704 aaKnown RBP13.45□□□□□ -0.26
TGFBR3-201ENST00000212355 CHIT1Q13231 466 aa13.45□□□□□ -0.26
TGFBR3-201ENST00000212355 ODF4Q2M2E3 257 aa13.45□□□□□ -0.26
TGFBR3-201ENST00000212355 CAPN13Q6MZZ7 669 aaPredicted RBP13.45□□□□□ -0.26
TGFBR3-201ENST00000212355 CHSY3Q70JA7 882 aa13.45□□□□□ -0.26
TGFBR3-201ENST00000212355 BEND5Q7L4P6 421 aa13.45□□□□□ -0.26
TGFBR3-201ENST00000212355 SPATA19Q7Z5L4 167 aa13.45□□□□□ -0.26
TGFBR3-201ENST00000212355 STX12Q86Y82 276 aa13.45□□□□□ -0.26
TGFBR3-201ENST00000212355 ZBTB8BQ8NAP8 495 aaPredicted RBP13.45□□□□□ -0.26
TGFBR3-201ENST00000212355 UBE2E3Q969T4 207 aa13.45□□□□□ -0.26
TGFBR3-201ENST00000212355 SPATA5L1Q9BVQ7 753 aa13.45□□□□□ -0.26
TGFBR3-201ENST00000212355 SNTG1Q9NSN8 517 aa13.45□□□□□ -0.26
TGFBR3-201ENST00000212355 PHF24Q9UPV7 400 aa13.45□□□□□ -0.26
TGFBR3-201ENST00000212355 IL1R2P27930 398 aa13.45□□□□□ -0.26
TGFBR3-201ENST00000212355 CAPGP40121 348 aa13.45□□□□□ -0.26
TGFBR3-201ENST00000212355 KIR3DL1P43629 444 aa13.45□□□□□ -0.26
TGFBR3-201ENST00000212355 TXNL4AP83876 142 aaKnown RBP13.45□□□□□ -0.26
TGFBR3-201ENST00000212355 MEIOBQ8N635 442 aa13.45□□□□□ -0.26
TGFBR3-201ENST00000212355 BTN2A3PQ96KV6 586 aa13.45□□□□□ -0.26
TGFBR3-201ENST00000212355 LHX5Q9H2C1 402 aa13.45□□□□□ -0.26
TGFBR3-201ENST00000212355 GRHL1Q9NZI5 618 aa13.45□□□□□ -0.26
TGFBR3-201ENST00000212355 MYO5BQ9ULV0 1848 aa13.45□□□□□ -0.26
TGFBR3-201ENST00000212355 MST1RQ04912 1400 aa13.45□□□□□ -0.26
TGFBR3-201ENST00000212355 PPEF2O14830 753 aa13.45□□□□□ -0.26
TGFBR3-201ENST00000212355 C22orf31O95567 290 aa13.45□□□□□ -0.26
TGFBR3-201ENST00000212355 ASPAP45381 313 aa13.45□□□□□ -0.26
TGFBR3-201ENST00000212355 RPS9P46781 194 aaKnown RBP13.45□□□□□ -0.26
TGFBR3-201ENST00000212355 HNMTP50135 292 aa13.45□□□□□ -0.26
TGFBR3-201ENST00000212355 PTPRCAPQ14761 206 aa13.45□□□□□ -0.26
TGFBR3-201ENST00000212355 IDNKQ5T6J7 187 aa13.45□□□□□ -0.26
TGFBR3-201ENST00000212355 LIN54Q6MZP7 749 aa13.45□□□□□ -0.26
TGFBR3-201ENST00000212355 POTEHQ6S545 545 aa13.45□□□□□ -0.26
TGFBR3-201ENST00000212355 UBR7Q8N806 425 aa13.45□□□□□ -0.26
TGFBR3-201ENST00000212355 C5orf34Q96MH7 638 aa13.45□□□□□ -0.26
TGFBR3-201ENST00000212355 DNAJC11Q9NVH1 559 aa13.45□□□□□ -0.26
TGFBR3-201ENST00000212355 TVP23BQ9NYZ1 205 aa13.45□□□□□ -0.26
TGFBR3-201ENST00000212355 ARHGEF33A8MVX0 844 aa13.45□□□□□ -0.26
TGFBR3-201ENST00000212355 CYP2C18P33260 490 aa13.45□□□□□ -0.26
TGFBR3-201ENST00000212355 HMGCS1Q01581 520 aa13.45□□□□□ -0.26
TGFBR3-201ENST00000212355 TCEAL5Q5H9L2 206 aa13.45□□□□□ -0.26
TGFBR3-201ENST00000212355 ANKRD26P1Q6NSI1 321 aa13.45□□□□□ -0.26
TGFBR3-201ENST00000212355 ULK3Q6PHR2 472 aa13.45□□□□□ -0.26
TGFBR3-201ENST00000212355 TMEM199Q8N511 208 aa13.45□□□□□ -0.26
TGFBR3-201ENST00000212355 PCDH19Q8TAB3 1148 aa13.45□□□□□ -0.26
TGFBR3-201ENST00000212355 GRHL3Q8TE85 626 aa13.45□□□□□ -0.26
TGFBR3-201ENST00000212355 PRRG4Q9BZD6 226 aa13.45□□□□□ -0.26
TGFBR3-201ENST00000212355 TRPV5Q9NQA5 729 aa13.45□□□□□ -0.26
TGFBR3-201ENST00000212355 ATG13O75143 517 aa13.45□□□□□ -0.26
TGFBR3-201ENST00000212355 UGT2B11O75310 529 aa13.45□□□□□ -0.26
TGFBR3-201ENST00000212355 AHCYP23526 432 aa13.45□□□□□ -0.26
TGFBR3-201ENST00000212355 HNRNPH3P31942 346 aaKnown RBP13.45□□□□□ -0.26
TGFBR3-201ENST00000212355 TMEM220Q6QAJ8 160 aa13.45□□□□□ -0.26
TGFBR3-201ENST00000212355 IKBIPQ70UQ0 350 aa13.45□□□□□ -0.26
TGFBR3-201ENST00000212355 THAP5Q7Z6K1 395 aa13.45□□□□□ -0.26
TGFBR3-201ENST00000212355 OR2L5Q8NG80 312 aa13.45□□□□□ -0.26
TGFBR3-201ENST00000212355 CD99L2Q8TCZ2 262 aa13.45□□□□□ -0.26
TGFBR3-201ENST00000212355 CLP1Q92989 425 aaKnown RBP13.45□□□□□ -0.26
TGFBR3-201ENST00000212355 HSD3B7Q9H2F3 369 aa13.45□□□□□ -0.26
TGFBR3-201ENST00000212355 SAMD4AQ9UPU9 718 aaKnown RBP13.45□□□□□ -0.26
TGFBR3-201ENST00000212355 ASGR1P07306 291 aa13.45□□□□□ -0.26
TGFBR3-201ENST00000212355 PTPN9P43378 593 aa13.45□□□□□ -0.26
TGFBR3-201ENST00000212355 RPS6KA3P51812 740 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms