RNA–Protein interactions for RNA: ENST00000054666.10

VAMP3-201, Transcript of vesicle associated membrane protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAMP3, Length 2,205 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-201ENST00000054666 SPATS1Q496A3 300 aa8.14□□□□□ -1.11
VAMP3-201ENST00000054666 LETMD1Q6P1Q0 360 aa8.14□□□□□ -1.11
VAMP3-201ENST00000054666 BLOC1S3Q6QNY0 202 aa8.14□□□□□ -1.11
VAMP3-201ENST00000054666 SCIMPQ6UWF3 145 aa8.14□□□□□ -1.11
VAMP3-201ENST00000054666 MILR1Q7Z6M3 343 aa8.14□□□□□ -1.11
VAMP3-201ENST00000054666 RETREG3Q86VR2 466 aa8.14□□□□□ -1.11
VAMP3-201ENST00000054666 ST13P4Q8IZP2 240 aaPredicted RBP8.14□□□□□ -1.11
VAMP3-201ENST00000054666 MINDY1Q8N5J2 469 aa8.14□□□□□ -1.11
VAMP3-201ENST00000054666 GPR26Q8NDV2 337 aa8.14□□□□□ -1.11
VAMP3-201ENST00000054666 OR4F6Q8NGB9 312 aa8.14□□□□□ -1.11
VAMP3-201ENST00000054666 CCDC97Q96F63 343 aaPredicted RBP8.14□□□□□ -1.11
VAMP3-201ENST00000054666 CDK15Q96Q40 435 aa8.14□□□□□ -1.11
VAMP3-201ENST00000054666 MCCC1Q96RQ3 725 aaPredicted RBP8.14□□□□□ -1.11
VAMP3-201ENST00000054666 ACOX2Q99424 681 aa8.14□□□□□ -1.11
VAMP3-201ENST00000054666 C1orf50Q9BV19 199 aa8.14□□□□□ -1.11
VAMP3-201ENST00000054666 NSUN3Q9H649 340 aaKnown RBP8.14□□□□□ -1.11
VAMP3-201ENST00000054666 IPPKQ9H8X2 491 aa8.14□□□□□ -1.11
VAMP3-201ENST00000054666 TMEM45AQ9NWC5 275 aa8.14□□□□□ -1.11
VAMP3-201ENST00000054666 HCFC1R1Q9NWW0 138 aa8.14□□□□□ -1.11
VAMP3-201ENST00000054666 PKD2L2Q9NZM6 624 aa8.14□□□□□ -1.11
VAMP3-201ENST00000054666 TBC1D14Q9P2M4 693 aa8.14□□□□□ -1.11
VAMP3-201ENST00000054666 ABCD2Q9UBJ2 740 aa8.14□□□□□ -1.11
VAMP3-201ENST00000054666 CD300AQ9UGN4 299 aa8.14□□□□□ -1.11
VAMP3-201ENST00000054666 ZNF225Q9UK10 706 aa8.14□□□□□ -1.11
VAMP3-201ENST00000054666 SLC8A2Q9UPR5 921 aa8.14□□□□□ -1.11
VAMP3-201ENST00000054666 LZTS1Q9Y250 596 aa8.14□□□□□ -1.11
VAMP3-201ENST00000054666 CCL26Q9Y258 94 aa8.14□□□□□ -1.11
VAMP3-201ENST00000054666 ASB1Q9Y576 335 aa8.14□□□□□ -1.11
VAMP3-201ENST00000054666 AP4S1Q9Y587 144 aa8.14□□□□□ -1.11
VAMP3-201ENST00000054666 IRAK3Q9Y616 596 aa8.14□□□□□ -1.11
VAMP3-201ENST00000054666 C15orf38-AP3S2A0A0A6YYH1 394 aa8.13□□□□□ -1.11
VAMP3-201ENST00000054666 A0A1W2PP18 115 aa8.13□□□□□ -1.11
VAMP3-201ENST00000054666 DYTNA2CJ06 578 aa8.13□□□□□ -1.11
VAMP3-201ENST00000054666 DPPA5A6NC42 116 aa8.13□□□□□ -1.11
VAMP3-201ENST00000054666 EIF3FO00303 357 aaPredicted RBP8.13□□□□□ -1.11
VAMP3-201ENST00000054666 XYLBO75191 536 aa8.13□□□□□ -1.11
VAMP3-201ENST00000054666 CYP2A6P11509 494 aaPredicted RBP8.13□□□□□ -1.11
VAMP3-201ENST00000054666 TYRP14679 529 aa8.13□□□□□ -1.11
VAMP3-201ENST00000054666 PTPN2P17706 415 aa8.13□□□□□ -1.11
VAMP3-201ENST00000054666 MSH3P20585 1137 aa8.13□□□□□ -1.11
VAMP3-201ENST00000054666 AKT1P31749 480 aa8.13□□□□□ -1.11
VAMP3-201ENST00000054666 NNMTP40261 264 aa8.13□□□□□ -1.11
VAMP3-201ENST00000054666 CCR2P41597 374 aa8.13□□□□□ -1.11
VAMP3-201ENST00000054666 POLR2JP52435 117 aaKnown RBP8.13□□□□□ -1.11
VAMP3-201ENST00000054666 PPIGQ13427 754 aaKnown RBP eCLIP8.13□□□□□ -1.11
VAMP3-201ENST00000054666 INPP5AQ14642 412 aa8.13□□□□□ -1.11
VAMP3-201ENST00000054666 C6orf10Q5SRN2 563 aa8.13□□□□□ -1.11
VAMP3-201ENST00000054666 GPRC6AQ5T6X5 926 aa8.13□□□□□ -1.11
VAMP3-201ENST00000054666 METTL2BQ6P1Q9 378 aaKnown RBP8.13□□□□□ -1.11
VAMP3-201ENST00000054666 CYP2R1Q6VVX0 501 aa8.13□□□□□ -1.11
VAMP3-201ENST00000054666 DPY19L3Q6ZPD9 716 aa8.13□□□□□ -1.11
VAMP3-201ENST00000054666 Q6ZVU0 165 aa8.13□□□□□ -1.11
VAMP3-201ENST00000054666 RTL10Q7L3V2 364 aa8.13□□□□□ -1.11
VAMP3-201ENST00000054666 ARPINQ7Z6K5 226 aa8.13□□□□□ -1.11
VAMP3-201ENST00000054666 TMEM25Q86YD3 366 aa8.13□□□□□ -1.11
VAMP3-201ENST00000054666 LEMD2Q8NC56 503 aa8.13□□□□□ -1.11
VAMP3-201ENST00000054666 UBTD2Q8WUN7 234 aa8.13□□□□□ -1.11
VAMP3-201ENST00000054666 EME1Q96AY2 570 aa8.13□□□□□ -1.11
VAMP3-201ENST00000054666 LRRC58Q96CX6 371 aa8.13□□□□□ -1.11
VAMP3-201ENST00000054666 LMLNQ96KR4 655 aa8.13□□□□□ -1.11
VAMP3-201ENST00000054666 PPP3R2Q96LZ3 170 aa8.13□□□□□ -1.11
VAMP3-201ENST00000054666 PKP2Q99959 881 aa8.13□□□□□ -1.11
VAMP3-201ENST00000054666 GPATCH1Q9BRR8 931 aaKnown RBP8.13□□□□□ -1.11
VAMP3-201ENST00000054666 MUC13Q9H3R2 512 aa8.13□□□□□ -1.11
VAMP3-201ENST00000054666 TDP1Q9NUW8 608 aa8.13□□□□□ -1.11
VAMP3-201ENST00000054666 KLHL42Q9P2K6 505 aa8.13□□□□□ -1.11
VAMP3-201ENST00000054666 PRKAG2Q9UGJ0 569 aa8.13□□□□□ -1.11
VAMP3-201ENST00000054666 PTBP2Q9UKA9 531 aaKnown RBP8.13□□□□□ -1.11
VAMP3-201ENST00000054666 PPIL1Q9Y3C6 166 aa8.13□□□□□ -1.11
VAMP3-201ENST00000054666 TCRBV3S1A0A5B6 114 aa8.13□□□□□ -1.11
VAMP3-201ENST00000054666 FAM234BA2RU67 622 aa8.13□□□□□ -1.11
VAMP3-201ENST00000054666 CFAP99D6REC4 459 aa8.13□□□□□ -1.11
VAMP3-201ENST00000054666 K7EPI3 171 aa8.13□□□□□ -1.11
VAMP3-201ENST00000054666 NME4O00746 187 aa8.13□□□□□ -1.11
VAMP3-201ENST00000054666 NRG2O14511 850 aaPredicted RBP8.13□□□□□ -1.11
VAMP3-201ENST00000054666 OR7A17O14581 309 aa8.13□□□□□ -1.11
VAMP3-201ENST00000054666 RGS14O43566 566 aa8.13□□□□□ -1.11
VAMP3-201ENST00000054666 KATNA1O75449 491 aa8.13□□□□□ -1.11
VAMP3-201ENST00000054666 EEDO75530 441 aaKnown RBP8.13□□□□□ -1.11
VAMP3-201ENST00000054666 FGBP02675 491 aa8.13□□□□□ -1.11
VAMP3-201ENST00000054666 RHOP08100 348 aa8.13□□□□□ -1.11
VAMP3-201ENST00000054666 ANXA5P08758 320 aa8.13□□□□□ -1.11
VAMP3-201ENST00000054666 HSD17B1P14061 328 aa8.13□□□□□ -1.11
VAMP3-201ENST00000054666 ZNF30P17039 623 aa8.13□□□□□ -1.11
VAMP3-201ENST00000054666 SLC7A1P30825 629 aa8.13□□□□□ -1.11
VAMP3-201ENST00000054666 GRIA3P42263 894 aa8.13□□□□□ -1.11
VAMP3-201ENST00000054666 CASP2P42575 452 aa8.13□□□□□ -1.11
VAMP3-201ENST00000054666 EPHA5P54756 1037 aa8.13□□□□□ -1.11
VAMP3-201ENST00000054666 SEMG2Q02383 582 aa8.13□□□□□ -1.11
VAMP3-201ENST00000054666 TRAF3Q13114 568 aa8.13□□□□□ -1.11
VAMP3-201ENST00000054666 PRKG2Q13237 762 aa8.13□□□□□ -1.11
VAMP3-201ENST00000054666 MAD2L1Q13257 205 aaPredicted RBP8.13□□□□□ -1.11
VAMP3-201ENST00000054666 CAPRIN1Q14444 709 aaKnown RBP8.13□□□□□ -1.11
VAMP3-201ENST00000054666 TIGD2Q4W5G0 525 aa8.13□□□□□ -1.11
VAMP3-201ENST00000054666 C6orf136Q5SQH8 315 aa8.13□□□□□ -1.11
VAMP3-201ENST00000054666 IL23RQ5VWK5 629 aa8.13□□□□□ -1.11
VAMP3-201ENST00000054666 FBXO46Q6PJ61 603 aaPredicted RBP8.13□□□□□ -1.11
VAMP3-201ENST00000054666 BRAT1Q6PJG6 821 aa8.13□□□□□ -1.11
VAMP3-201ENST00000054666 GDPD4Q6W3E5 623 aa8.13□□□□□ -1.11
VAMP3-201ENST00000054666 AHI1Q8N157 1196 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms