RNA–Protein interactions for RNA: ENST00000003912.7

NIPAL3-201, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NIPAL3, Length 5,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-201ENST00000003912 C9J4A7 227 aa10.22□□□□□ -0.77
NIPAL3-201ENST00000003912 PTGESO14684 152 aa10.22□□□□□ -0.77
NIPAL3-201ENST00000003912 NPC1O15118 1278 aa10.22□□□□□ -0.77
NIPAL3-201ENST00000003912 CLOCKO15516 846 aa10.22□□□□□ -0.77
NIPAL3-201ENST00000003912 PEX1O43933 1283 aa10.22□□□□□ -0.77
NIPAL3-201ENST00000003912 MATN4O95460 622 aa10.22□□□□□ -0.77
NIPAL3-201ENST00000003912 CLDN7O95471 211 aa10.22□□□□□ -0.77
NIPAL3-201ENST00000003912 HSMCR30P0CW71 290 aa10.22□□□□□ -0.77
NIPAL3-201ENST00000003912 PROZP22891 400 aa10.22□□□□□ -0.77
NIPAL3-201ENST00000003912 NR1D2Q14995 579 aa10.22□□□□□ -0.77
NIPAL3-201ENST00000003912 UAP1L1Q3KQV9 507 aa10.22□□□□□ -0.77
NIPAL3-201ENST00000003912 CLLU1OSQ5K130 101 aa10.22□□□□□ -0.77
NIPAL3-201ENST00000003912 IZUMO2Q6UXV1 221 aa10.22□□□□□ -0.77
NIPAL3-201ENST00000003912 CRYGNQ8WXF5 182 aa10.22□□□□□ -0.77
NIPAL3-201ENST00000003912 EXOSC8Q96B26 276 aaKnown RBP10.22□□□□□ -0.77
NIPAL3-201ENST00000003912 SLC2A13Q96QE2 648 aa10.22□□□□□ -0.77
NIPAL3-201ENST00000003912 PAAF1Q9BRP4 392 aa10.22□□□□□ -0.77
NIPAL3-201ENST00000003912 NEK6Q9HC98 313 aa10.22□□□□□ -0.77
NIPAL3-201ENST00000003912 CD207Q9UJ71 328 aa10.22□□□□□ -0.77
NIPAL3-201ENST00000003912 FBXW2Q9UKT8 454 aa10.22□□□□□ -0.77
NIPAL3-201ENST00000003912 SUV39H1O43463 412 aa10.22□□□□□ -0.77
NIPAL3-201ENST00000003912 TPP2P29144 1249 aaPredicted RBP10.22□□□□□ -0.77
NIPAL3-201ENST00000003912 FEN1P39748 380 aaKnown RBP10.22□□□□□ -0.77
NIPAL3-201ENST00000003912 CCR8P51685 355 aa10.22□□□□□ -0.77
NIPAL3-201ENST00000003912 TAS2R39P59534 338 aa10.22□□□□□ -0.77
NIPAL3-201ENST00000003912 TAS2R50P59544 299 aa10.22□□□□□ -0.77
NIPAL3-201ENST00000003912 CDC42P60953 191 aa10.22□□□□□ -0.77
NIPAL3-201ENST00000003912 ERN2Q76MJ5 926 aaKnown RBP10.22□□□□□ -0.77
NIPAL3-201ENST00000003912 SLC9B2Q86UD5 537 aa10.22□□□□□ -0.77
NIPAL3-201ENST00000003912 CLHC1Q8NHS4 586 aa10.22□□□□□ -0.77
NIPAL3-201ENST00000003912 ANKRD49Q8WVL7 239 aa10.22□□□□□ -0.77
NIPAL3-201ENST00000003912 FAM83CQ9BQN1 747 aa10.22□□□□□ -0.77
NIPAL3-201ENST00000003912 MCOLN1Q9GZU1 580 aa10.22□□□□□ -0.77
NIPAL3-201ENST00000003912 EQTNQ9NQ60 294 aa10.22□□□□□ -0.77
NIPAL3-201ENST00000003912 PDP2Q9P2J9 529 aa10.22□□□□□ -0.77
NIPAL3-201ENST00000003912 PPIEQ9UNP9 301 aaKnown RBP10.22□□□□□ -0.77
NIPAL3-201ENST00000003912 TELO2Q9Y4R8 837 aa10.22□□□□□ -0.77
NIPAL3-201ENST00000003912 TIMM22Q9Y584 194 aa10.22□□□□□ -0.77
NIPAL3-201ENST00000003912 RFPL2O75678 378 aa10.21□□□□□ -0.77
NIPAL3-201ENST00000003912 CBSLP0DN79 551 aa10.21□□□□□ -0.77
NIPAL3-201ENST00000003912 CBSP35520 551 aa10.21□□□□□ -0.77
NIPAL3-201ENST00000003912 CLCNKAP51800 687 aa10.21□□□□□ -0.77
NIPAL3-201ENST00000003912 EML3Q32P44 896 aa10.21□□□□□ -0.77
NIPAL3-201ENST00000003912 LMX1AQ8TE12 382 aa10.21□□□□□ -0.77
NIPAL3-201ENST00000003912 GDPD5Q8WTR4 605 aa10.21□□□□□ -0.77
NIPAL3-201ENST00000003912 SETD7Q8WTS6 366 aaKnown RBP10.21□□□□□ -0.77
NIPAL3-201ENST00000003912 AGAP2Q99490 1192 aa10.21□□□□□ -0.77
NIPAL3-201ENST00000003912 DPYSL5Q9BPU6 564 aa10.21□□□□□ -0.77
NIPAL3-201ENST00000003912 ANKHQ9HCJ1 492 aa10.21□□□□□ -0.77
NIPAL3-201ENST00000003912 SSU72Q9NP77 194 aaKnown RBP10.21□□□□□ -0.77
NIPAL3-201ENST00000003912 SUSD2Q9UGT4 822 aa10.21□□□□□ -0.77
NIPAL3-201ENST00000003912 PCDHB11Q9Y5F2 797 aa10.21□□□□□ -0.77
NIPAL3-201ENST00000003912 A0A0J9YYE9 177 aa10.21□□□□□ -0.77
NIPAL3-201ENST00000003912 TMEM150CB9EJG8 249 aa10.21□□□□□ -0.77
NIPAL3-201ENST00000003912 M0QZQ0 153 aa10.21□□□□□ -0.77
NIPAL3-201ENST00000003912 POP7O75817 140 aaKnown RBP10.21□□□□□ -0.77
NIPAL3-201ENST00000003912 KAT7O95251 611 aa10.21□□□□□ -0.77
NIPAL3-201ENST00000003912 GSRP00390 522 aa10.21□□□□□ -0.77
NIPAL3-201ENST00000003912 PRPS2P11908 318 aa10.21□□□□□ -0.77
NIPAL3-201ENST00000003912 GRIA3P42263 894 aa10.21□□□□□ -0.77
NIPAL3-201ENST00000003912 MLLT3P42568 568 aaPredicted RBP10.21□□□□□ -0.77
NIPAL3-201ENST00000003912 GSSP48637 474 aa10.21□□□□□ -0.77
NIPAL3-201ENST00000003912 AP1S2P56377 157 aa10.21□□□□□ -0.77
NIPAL3-201ENST00000003912 BNC1Q01954 994 aa10.21□□□□□ -0.77
NIPAL3-201ENST00000003912 SLC34A1Q06495 639 aa10.21□□□□□ -0.77
NIPAL3-201ENST00000003912 RUNX3Q13761 415 aa10.21□□□□□ -0.77
NIPAL3-201ENST00000003912 ZNF852Q6ZMS4 543 aa10.21□□□□□ -0.77
NIPAL3-201ENST00000003912 TDRPQ86YL5 185 aa10.21□□□□□ -0.77
NIPAL3-201ENST00000003912 DHRSXQ8N5I4 330 aa10.21□□□□□ -0.77
NIPAL3-201ENST00000003912 SLC38A2Q96QD8 506 aa10.21□□□□□ -0.77
NIPAL3-201ENST00000003912 HOPXQ9BPY8 73 aaPredicted RBP10.21□□□□□ -0.77
NIPAL3-201ENST00000003912 CNPPD1Q9BV87 410 aa10.21□□□□□ -0.77
NIPAL3-201ENST00000003912 NUSAP1Q9BXS6 441 aaKnown RBP10.21□□□□□ -0.77
NIPAL3-201ENST00000003912 SLITRK2Q9H156 845 aa10.21□□□□□ -0.77
NIPAL3-201ENST00000003912 EIF2B4Q9UI10 523 aaKnown RBP10.21□□□□□ -0.77
NIPAL3-201ENST00000003912 CNTN6Q9UQ52 1028 aa10.21□□□□□ -0.77
NIPAL3-201ENST00000003912 TTC24A2A3L6 582 aaPredicted RBP10.21□□□□□ -0.78
NIPAL3-201ENST00000003912 MYL12BO14950 172 aa10.21□□□□□ -0.78
NIPAL3-201ENST00000003912 EDF1O60869 148 aaKnown RBP10.21□□□□□ -0.78
NIPAL3-201ENST00000003912 C1QTNF8P60827 252 aa10.21□□□□□ -0.78
NIPAL3-201ENST00000003912 OGDHQ02218 1023 aa10.21□□□□□ -0.78
NIPAL3-201ENST00000003912 ZNF805Q5CZA5 627 aa10.21□□□□□ -0.78
NIPAL3-201ENST00000003912 ERICH5Q6P6B1 374 aa10.21□□□□□ -0.78
NIPAL3-201ENST00000003912 PROSER1Q86XN7 944 aa10.21□□□□□ -0.78
NIPAL3-201ENST00000003912 TERB1Q8NA31 727 aa10.21□□□□□ -0.78
NIPAL3-201ENST00000003912 PDLIM7Q9NR12 457 aa10.21□□□□□ -0.78
NIPAL3-201ENST00000003912 SIN3BO75182 1162 aa10.21□□□□□ -0.78
NIPAL3-201ENST00000003912 SRPRAP08240 638 aaKnown RBP10.21□□□□□ -0.78
NIPAL3-201ENST00000003912 PIM1P11309 404 aaPredicted RBP10.21□□□□□ -0.78
NIPAL3-201ENST00000003912 CPN2P22792 545 aa10.21□□□□□ -0.78
NIPAL3-201ENST00000003912 MAGEA10P43363 369 aaPredicted RBP10.21□□□□□ -0.78
NIPAL3-201ENST00000003912 PSMD4P55036 377 aaKnown RBP10.21□□□□□ -0.78
NIPAL3-201ENST00000003912 RPS21P63220 83 aaKnown RBP10.21□□□□□ -0.78
NIPAL3-201ENST00000003912 PRR5P85299 388 aa10.21□□□□□ -0.78
NIPAL3-201ENST00000003912 LMAN2Q12907 356 aa10.21□□□□□ -0.78
NIPAL3-201ENST00000003912 LARS2Q15031 903 aaKnown RBP10.21□□□□□ -0.78
NIPAL3-201ENST00000003912 TXNRD3NBQ6F5E7 133 aa10.21□□□□□ -0.78
NIPAL3-201ENST00000003912 ARMC8Q8IUR7 673 aa10.21□□□□□ -0.78
NIPAL3-201ENST00000003912 MCEMP1Q8IX19 187 aa10.21□□□□□ -0.78
NIPAL3-201ENST00000003912 TCEAL8Q8IYN2 117 aa10.21□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms