RNA–Protein interactions for RNA: ENSMUST00000076265.12

Upf3b-201, Transcript of UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3b, Length 2,344 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3b-201ENSMUST00000076265 Gga2Q6P5E6 603 aa8.97□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Cyp2d40Q6P8N9 338 aa8.97□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Ptx4Q6RUU0 478 aa8.97□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Tmem132dQ76HP3 1097 aa8.97□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Olfr1196Q7TR14 314 aa8.97□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Asnsd1Q8BFS9 627 aa8.97□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Kirrel3Q8BR86 778 aa8.97□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Gpr20Q8BYC4 358 aa8.97□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Tns4Q8BZ33 696 aa8.97□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Setdb2Q8C267 713 aa8.97□□□□□ -0.97
Upf3b-201ENSMUST00000076265 EndovQ8C9A2 338 aa8.97□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Gulp1Q8K2A1 304 aa8.97□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Slc51aQ8R000 340 aa8.97□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Vmn1r24Q8R2D6 296 aa8.97□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Wdr98Q8VC42 657 aa8.97□□□□□ -0.97
Upf3b-201ENSMUST00000076265 ManfQ9CXI5 179 aaKnown RBP8.97□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Sp2Q9D2H6 612 aa8.97□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Trmt44Q9D2Q2 713 aa8.97□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Hsf2bpQ9D4G2 338 aa8.97□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Hsd3b7Q9EQC1 369 aa8.97□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Pgpep1Q9ESW8 209 aa8.97□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Gpaa1Q9WTK3 621 aa8.97□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Kif13bA0A286YCV9 1847 aa8.97□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Sipa1l3G3X9J0 1776 aa8.96□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Cfap77A0A087WRI3 283 aa8.96□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Nlrp1bA1Z198 1177 aa8.96□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Slc35d1A2AKQ0 355 aa8.96□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Olfr1200A2ATJ4 336 aa8.96□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Fbxl16A2RT62 479 aa8.96□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Rhox7bA6PW38 321 aa8.96□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Vmn2r27D3YUK6 857 aa8.96□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Gm21293E9Q4G9 266 aa8.96□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Vmn2r55G3UWZ4 781 aa8.96□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Olfr694K7N641 315 aa8.96□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Cyp3a25O09158 503 aa8.96□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Wsb2O54929 404 aa8.96□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Mab21l1O70299 359 aa8.96□□□□□ -0.97
Upf3b-201ENSMUST00000076265 FhitO89106 150 aa8.96□□□□□ -0.97
Upf3b-201ENSMUST00000076265 IghgP01863 330 aa8.96□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Gnai2P08752 355 aaKnown RBP8.96□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Gad1P48318 593 aa8.96□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Pcyt1aP49586 367 aa8.96□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Ube2g2P60605 165 aa8.96□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Has2P70312 552 aa8.96□□□□□ -0.97
Upf3b-201ENSMUST00000076265 UrodP70697 367 aa8.96□□□□□ -0.97
Upf3b-201ENSMUST00000076265 LyarQ08288 388 aaKnown RBP8.96□□□□□ -0.97
Upf3b-201ENSMUST00000076265 IqcmQ149I8 489 aa8.96□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Dmrtc1bQ2PMX6 267 aa8.96□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Nab1Q61122 486 aa8.96□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Sema4bQ62179 823 aa8.96□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Phc1Q64028 1012 aa8.96□□□□□ -0.97
Upf3b-201ENSMUST00000076265 S100a15aQ6S5I3 108 aa8.96□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Smg5Q6ZPY2 1017 aa8.96□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Eif2s1Q6ZWX6 315 aaKnown RBP8.96□□□□□ -0.97
Upf3b-201ENSMUST00000076265 HhipQ7TN16 700 aa8.96□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Olfr845Q7TRG2 312 aa8.96□□□□□ -0.97
Upf3b-201ENSMUST00000076265 HeltQ7TS99 240 aa8.96□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Xylt1Q811B1 953 aa8.96□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Fam53cQ8BXQ8 393 aa8.96□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Ldlrap1Q8C142 308 aa8.96□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Tusc5Q8C838 173 aa8.96□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Serpina10Q8R121 448 aa8.96□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Otud7aQ8R554 926 aa8.96□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Olfr868Q8VFI8 309 aa8.96□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Eif3hQ91WK2 352 aaKnown RBP8.96□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Pcdha8Q91Y12 946 aa8.96□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Atg13Q91YI1 516 aa8.96□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Ccdc198Q9CPZ1 294 aa8.96□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Lztr1Q9CQ33 837 aa8.96□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Wdr4Q9EP82 413 aa8.96□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Pik3cgQ9JHG7 1102 aa8.96□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Ltb4r2Q9JJL9 360 aa8.96□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Nr4a3Q9QZB6 627 aa8.96□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Bex1Q9R224 128 aa8.96□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Uchl5Q9WUP7 329 aa8.96□□□□□ -0.97
Upf3b-201ENSMUST00000076265 Zkscan16A2ALW2 728 aa8.96□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Eif2b3B1AUN2 452 aaKnown RBP8.96□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Kpna7C0LLJ0 499 aa8.96□□□□□ -0.98
Upf3b-201ENSMUST00000076265 D7Ertd443eD2J0Y4 644 aa8.96□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Gstp3F6RWR5 210 aa8.96□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Vmn1r86L7N213 316 aa8.96□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Vmn2r77L7N2B7 854 aa8.96□□□□□ -0.98
Upf3b-201ENSMUST00000076265 CenpaO35216 134 aa8.96□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Fzd1O70421 642 aa8.96□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Cyp2d11P24457 504 aa8.96□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Cxcl5P50228 132 aa8.96□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Faf1P54731 649 aa8.96□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Map2k6P70236 334 aaKnown RBP8.96□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Treml2Q2LA85 329 aa8.96□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Gm3414Q3TNU4 584 aa8.96□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Snx33Q4VAA7 574 aa8.96□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Scarb1Q61009 509 aa8.96□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Tead4Q62296 427 aa8.96□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Otop2Q80SX5 563 aa8.96□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Wscd1Q80XH4 572 aa8.96□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Slc26a9Q8BU91 790 aa8.96□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Champ1Q8K327 802 aaKnown RBP8.96□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Bst2Q8R2Q8 172 aa8.96□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Olfr826Q8VFU6 313 aa8.96□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Olfr1443Q8VFW8 312 aa8.96□□□□□ -0.98
Retrieved 100 of 22,080 RNA–protein pairs in 36.7 ms