RNA–Protein interactions for RNA: ENSMUST00000053440.7

Ccdc40-202, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ccdc40, Length 3,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-202ENSMUST00000053440 LchnQ3UHG7 455 aa9.68□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Glb1l2Q3UPY5 636 aa9.68□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Esrp1Q3US41 680 aaKnown RBP9.68□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Zfp90Q61967 636 aa9.68□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Usp7Q6A4J8 1103 aa9.68□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 VwdeQ6DFV8 926 aa9.68□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Krt72Q6IME9 520 aa9.68□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 RubcnQ80U62 956 aa9.68□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Wipi2Q80W47 445 aa9.68□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Znf451Q8C0P7 1056 aa9.68□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Slc49a3Q8CE47 516 aa9.68□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Acsl5Q8JZR0 683 aa9.68□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Ankrd49Q8VE42 238 aa9.68□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Rnf167Q91XF4 347 aa9.68□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Pramel1Q99MW3 458 aa9.68□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Ndufaf7Q9CWG8 436 aa9.68□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 CutalQ9D1U5 156 aa9.68□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 PgcQ9D7R7 392 aa9.68□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Smurf2A2A5Z6 748 aa9.67□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Ankrd16A2AS55 361 aa9.67□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Pnldc1B2RXZ1 531 aa9.67□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 9230113P08RikD3YWX3 137 aa9.67□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Trim30bE9PVL6 203 aa9.67□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Vmn1r238E9Q373 306 aa9.67□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Zfr2E9Q5M4 874 aa9.67□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Gm20503G3UZK1 150 aa9.67□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Nccrp1G3X9C2 266 aa9.67□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Calhm3J3QMI4 347 aa9.67□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Ackr2O08707 378 aa9.67□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 MntO08789 591 aa9.67□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Emp3O35912 163 aa9.67□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 ThrbP37242 461 aa9.67□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Fpr-rs6Q3SXG2 339 aa9.67□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Kcna5Q61762 602 aa9.67□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Dna2Q6ZQJ5 1062 aa9.67□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Hspa13Q8BM72 471 aa9.67□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Ppp4r4Q8C0Y0 875 aa9.67□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Hid1Q8R1F6 788 aa9.67□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Olfr1361Q8VFH0 317 aa9.67□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Znf622Q91VY9 476 aa9.67□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Tmem8aQ9ESN3 769 aa9.67□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 CtsrQ9JIA9 334 aa9.67□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Adam23Q9R1V7 829 aa9.67□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Gm42715A0A087WP63 3095 aaKnown RBP9.67□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Plxna4Q80UG2 1893 aa9.67□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Cylc1A0A1B0GR13 642 aa9.67□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Man1b1A2AJ15 658 aa9.67□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Pramef20B1ARV6 477 aa9.67□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Zfp992B1ASD8 573 aa9.67□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Krt83E9Q1Y9 479 aa9.67□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Cyp2b23E9Q593 491 aa9.67□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Ncam2O35136 837 aa9.67□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Pik3cdO35904 1043 aa9.67□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Prkag1O54950 330 aa9.67□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 NagluO88325 739 aa9.67□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Cbx3P23198 183 aaKnown RBP9.67□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Acvr1P37172 509 aa9.67□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Rps24P62849 133 aaKnown RBP9.67□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Kcnj13P86046 360 aa9.67□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Npy2rP97295 381 aa9.67□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Mex3cQ05A36 652 aaKnown RBP9.67□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Pros1Q08761 675 aa9.67□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Cpne7Q0VE82 557 aa9.67□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 CenplQ3U3S3 329 aa9.67□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Plk5Q4FZD7 595 aa9.67□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Lcp2Q60787 533 aaKnown RBP9.67□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Ddx4Q61496 702 aa9.67□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Olfr834Q7TRG8 312 aa9.67□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 DglucyQ8BH86 617 aa9.67□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Cdh7Q8BM92 785 aa9.67□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Casp9Q8C3Q9 454 aa9.67□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Ugt2b34Q8K154 532 aa9.67□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Zfp991Q8R1N3 573 aa9.67□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Olfr1311Q8VET0 312 aa9.67□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 AassQ99K67 926 aa9.67□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Serpinb11Q9CQV3 388 aa9.67□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Clec2gQ9D676 269 aa9.67□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Bpifa3Q9D9J8 232 aa9.67□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 NbnQ9R207 751 aa9.67□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Igkv10-96A0A140T8M1 115 aa9.66□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Vmn2r73D3Z7M3 851 aa9.66□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 OgdhlE9Q7L0 1029 aa9.66□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Zfp758E9QAA1 583 aa9.66□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Fv4P11370 679 aa9.66□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Cd9P40240 226 aa9.66□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Cyp2c38P56655 490 aa9.66□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Lsm3P62311 102 aaKnown RBP9.66□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Krt80Q0VBK2 452 aa9.66□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Mxd4Q60948 209 aa9.66□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Igfbp7Q61581 281 aa9.66□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Slain1Q68FF7 579 aa9.66□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Cfap206Q6PE87 622 aa9.66□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Chst2Q80WV3 530 aa9.66□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Tex13c3Q810P0 219 aa9.66□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Ikzf5Q8BU00 419 aa9.66□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Mta3Q924K8 591 aa9.66□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Haus5Q9D786 619 aa9.66□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Dnajb4Q9D832 337 aa9.66□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Rpl38Q9JJI8 70 aaKnown RBP9.66□□□□□ -0.86
Ccdc40-202ENSMUST00000053440 Sh3glb1Q9JK48 365 aa9.66□□□□□ -0.86
Retrieved 100 of 22,080 RNA–protein pairs in 21.3 ms