RNA–Protein interactions for RNA: ENST00000641939.1

PHGDH-231, Transcript of phosphoglycerate dehydrogenase, human

Gene PHGDH, Length 540 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PHGDH-231	ENST00000641939	KLHL33	A6NCF5	533 aa		14.76	□□□□□ -0.05
PHGDH-231	ENST00000641939	MROH6	A6NGR9	719 aa		14.76	□□□□□ -0.05
PHGDH-231	ENST00000641939	LILRA5	A6NI73	299 aa		14.76	□□□□□ -0.05
PHGDH-231	ENST00000641939	AGRP	O00253	132 aa		14.76	□□□□□ -0.05
PHGDH-231	ENST00000641939	ZSCAN5DP	P0CG00	497 aa		14.76	□□□□□ -0.05
PHGDH-231	ENST00000641939	THRA	P10827	490 aa		14.76	□□□□□ -0.05
PHGDH-231	ENST00000641939	PSMA3	P25788	255 aa		14.76	□□□□□ -0.05
PHGDH-231	ENST00000641939	ITPKB	P27987	946 aa		14.76	□□□□□ -0.05
PHGDH-231	ENST00000641939	RPL22	P35268	128 aa	Known RBP	14.76	□□□□□ -0.05
PHGDH-231	ENST00000641939	HAL	P42357	657 aa		14.76	□□□□□ -0.05
PHGDH-231	ENST00000641939	C16orf72	Q14CZ0	275 aa		14.76	□□□□□ -0.05
PHGDH-231	ENST00000641939	SKIDA1	Q1XH10	827 aa		14.76	□□□□□ -0.05
PHGDH-231	ENST00000641939	BCL7A	Q4VC05	210 aa		14.76	□□□□□ -0.05
PHGDH-231	ENST00000641939	CCDC38	Q502W7	563 aa		14.76	□□□□□ -0.05
PHGDH-231	ENST00000641939	ZRANB3	Q5FWF4	1079 aa		14.76	□□□□□ -0.05
PHGDH-231	ENST00000641939	WDR74	Q6RFH5	385 aa	Predicted RBP	14.76	□□□□□ -0.05
PHGDH-231	ENST00000641939	TMEM26	Q6ZUK4	368 aa		14.76	□□□□□ -0.05
PHGDH-231	ENST00000641939	GSTA5	Q7RTV2	222 aa		14.76	□□□□□ -0.05
PHGDH-231	ENST00000641939	BEND7	Q8N7W2	519 aa	Predicted RBP	14.76	□□□□□ -0.05
PHGDH-231	ENST00000641939	RCBTB1	Q8NDN9	531 aa		14.76	□□□□□ -0.05
PHGDH-231	ENST00000641939	ANP32B	Q92688	251 aa	Known RBP	14.76	□□□□□ -0.05
PHGDH-231	ENST00000641939	CDKN2AIPNL	Q96HQ2	116 aa		14.76	□□□□□ -0.05
PHGDH-231	ENST00000641939	NAF1	Q96HR8	494 aa	Known RBP	14.76	□□□□□ -0.05
PHGDH-231	ENST00000641939	PBK	Q96KB5	322 aa		14.76	□□□□□ -0.05
PHGDH-231	ENST00000641939	COPS8	Q99627	209 aa		14.76	□□□□□ -0.05
PHGDH-231	ENST00000641939	TMEM9	Q9P0T7	183 aa		14.76	□□□□□ -0.05
PHGDH-231	ENST00000641939	LHX6	Q9UPM6	363 aa		14.76	□□□□□ -0.05
PHGDH-231	ENST00000641939	IGSF10	Q6WRI0	2623 aa		14.76	□□□□□ -0.05
PHGDH-231	ENST00000641939	TRBV5-4	A0A0C4DH59	114 aa		14.75	□□□□□ -0.05
PHGDH-231	ENST00000641939	HEATR9	A2RTY3	570 aa		14.75	□□□□□ -0.05
PHGDH-231	ENST00000641939	MGAT4D	A6NG13	374 aa		14.75	□□□□□ -0.05
PHGDH-231	ENST00000641939	OR52A4P	A6NMU1	304 aa		14.75	□□□□□ -0.05
PHGDH-231	ENST00000641939	CFAP99	D6REC4	459 aa		14.75	□□□□□ -0.05
PHGDH-231	ENST00000641939	APRT	P07741	180 aa		14.75	□□□□□ -0.05
PHGDH-231	ENST00000641939	ITIH1	P19827	911 aa		14.75	□□□□□ -0.05
PHGDH-231	ENST00000641939	MPST	P25325	297 aa		14.75	□□□□□ -0.05
PHGDH-231	ENST00000641939	ACRV1	P26436	265 aa		14.75	□□□□□ -0.05
PHGDH-231	ENST00000641939	PBLD	P30039	288 aa	Predicted RBP	14.75	□□□□□ -0.05
PHGDH-231	ENST00000641939	SLC5A2	P31639	672 aa		14.75	□□□□□ -0.05
PHGDH-231	ENST00000641939	GRIA1	P42261	906 aa		14.75	□□□□□ -0.05
PHGDH-231	ENST00000641939	MAPK9	P45984	424 aa		14.75	□□□□□ -0.05
PHGDH-231	ENST00000641939	KCNJ1	P48048	391 aa		14.75	□□□□□ -0.05
PHGDH-231	ENST00000641939	CACNG1	Q06432	222 aa		14.75	□□□□□ -0.05
PHGDH-231	ENST00000641939	LAMB3	Q13751	1172 aa		14.75	□□□□□ -0.05
PHGDH-231	ENST00000641939	NFE2L1	Q14494	772 aa		14.75	□□□□□ -0.05
PHGDH-231	ENST00000641939	CLCA4	Q14CN2	919 aa		14.75	□□□□□ -0.05
PHGDH-231	ENST00000641939	FAM83H	Q6ZRV2	1179 aa	Predicted RBP	14.75	□□□□□ -0.05
PHGDH-231	ENST00000641939	JAML	Q86YT9	394 aa		14.75	□□□□□ -0.05
PHGDH-231	ENST00000641939	SPACA3	Q8IXA5	215 aa		14.75	□□□□□ -0.05
PHGDH-231	ENST00000641939	RBM12B	Q8IXT5	1001 aa	Known RBP	14.75	□□□□□ -0.05
PHGDH-231	ENST00000641939	RASGEF1C	Q8N431	466 aa		14.75	□□□□□ -0.05
PHGDH-231	ENST00000641939	NAT14	Q8WUY8	206 aa		14.75	□□□□□ -0.05
PHGDH-231	ENST00000641939	KCNE4	Q8WWG9	221 aa		14.75	□□□□□ -0.05
PHGDH-231	ENST00000641939	NCSTN	Q92542	709 aa		14.75	□□□□□ -0.05
PHGDH-231	ENST00000641939	CXorf40B	Q96DE9	158 aa		14.75	□□□□□ -0.05
PHGDH-231	ENST00000641939	CCDC97	Q96F63	343 aa	Predicted RBP	14.75	□□□□□ -0.05
PHGDH-231	ENST00000641939	LINC00615	Q96LM1	132 aa	Predicted RBP	14.75	□□□□□ -0.05
PHGDH-231	ENST00000641939	TBC1D10A	Q9BXI6	508 aa		14.75	□□□□□ -0.05
PHGDH-231	ENST00000641939	DPH1	Q9BZG8	443 aa		14.75	□□□□□ -0.05
PHGDH-231	ENST00000641939	CASS4	Q9NQ75	786 aa		14.75	□□□□□ -0.05
PHGDH-231	ENST00000641939	POT1	Q9NUX5	634 aa		14.75	□□□□□ -0.05
PHGDH-231	ENST00000641939	ZDHHC3	Q9NYG2	299 aa		14.75	□□□□□ -0.05
PHGDH-231	ENST00000641939	PDP2	Q9P2J9	529 aa		14.75	□□□□□ -0.05
PHGDH-231	ENST00000641939	WDR37	Q9Y2I8	494 aa		14.75	□□□□□ -0.05
PHGDH-231	ENST00000641939	PCDHGA7	Q9Y5G6	932 aa		14.75	□□□□□ -0.05
PHGDH-231	ENST00000641939	IGLV3-16	A0A075B6K0	115 aa		14.74	□□□□□ -0.05
PHGDH-231	ENST00000641939	CCDC78	A2IDD5	438 aa		14.74	□□□□□ -0.05
PHGDH-231	ENST00000641939	SGTA	O43765	313 aa		14.74	□□□□□ -0.05
PHGDH-231	ENST00000641939	ATP1B2	P14415	290 aa	Predicted RBP	14.74	□□□□□ -0.05
PHGDH-231	ENST00000641939	ADRA1D	P25100	572 aa		14.74	□□□□□ -0.05
PHGDH-231	ENST00000641939	PRLHR	P49683	370 aa		14.74	□□□□□ -0.05
PHGDH-231	ENST00000641939	CDKN1C	P49918	316 aa	Predicted RBP	14.74	□□□□□ -0.05
PHGDH-231	ENST00000641939	METRNL	Q641Q3	311 aa		14.74	□□□□□ -0.05
PHGDH-231	ENST00000641939	TAS2R42	Q7RTR8	314 aa		14.74	□□□□□ -0.05
PHGDH-231	ENST00000641939	SERPINA9	Q86WD7	417 aa		14.74	□□□□□ -0.05
PHGDH-231	ENST00000641939	SLC35F6	Q8N357	371 aa		14.74	□□□□□ -0.05
PHGDH-231	ENST00000641939	PRELID2	Q8N945	189 aa		14.74	□□□□□ -0.05
PHGDH-231	ENST00000641939	AGBL5	Q8NDL9	886 aa		14.74	□□□□□ -0.05
PHGDH-231	ENST00000641939	OR2L2	Q8NH16	312 aa		14.74	□□□□□ -0.05
PHGDH-231	ENST00000641939	RANBP9	Q96S59	729 aa		14.74	□□□□□ -0.05
PHGDH-231	ENST00000641939	SLC40A1	Q9NP59	571 aa		14.74	□□□□□ -0.05
PHGDH-231	ENST00000641939	EIF2B3	Q9NR50	452 aa	Known RBP	14.74	□□□□□ -0.05
PHGDH-231	ENST00000641939	ACSL5	Q9ULC5	683 aa		14.74	□□□□□ -0.05
PHGDH-231	ENST00000641939	RIMKLB	Q9ULI2	386 aa		14.74	□□□□□ -0.05
PHGDH-231	ENST00000641939	PSMD13	Q9UNM6	376 aa		14.74	□□□□□ -0.05
PHGDH-231	ENST00000641939	SDK2	Q58EX2	2172 aa		14.74	□□□□□ -0.05
PHGDH-231	ENST00000641939	PRAMEF33	A0A0G2JMD5	474 aa		14.73	□□□□□ -0.05
PHGDH-231	ENST00000641939	NVL	O15381	856 aa	Known RBP	14.73	□□□□□ -0.05
PHGDH-231	ENST00000641939	UBXN7	O94888	489 aa		14.73	□□□□□ -0.05
PHGDH-231	ENST00000641939	PRSS56	P0CW18	603 aa		14.73	□□□□□ -0.05
PHGDH-231	ENST00000641939	MSN	P26038	577 aa	Known RBP	14.73	□□□□□ -0.05
PHGDH-231	ENST00000641939	CSTF2	P33240	577 aa	Known RBP eCLIP	14.73	□□□□□ -0.05
PHGDH-231	ENST00000641939	ETV5	P41161	510 aa		14.73	□□□□□ -0.05
PHGDH-231	ENST00000641939	ARSD	P51689	593 aa		14.73	□□□□□ -0.05
PHGDH-231	ENST00000641939	MAPK10	P53779	464 aa		14.73	□□□□□ -0.05
PHGDH-231	ENST00000641939	BASP1	P80723	227 aa	Known RBP	14.73	□□□□□ -0.05
PHGDH-231	ENST00000641939	TLE3	Q04726	772 aa		14.73	□□□□□ -0.05
PHGDH-231	ENST00000641939	RPE65	Q16518	533 aa		14.73	□□□□□ -0.05
PHGDH-231	ENST00000641939	SNAP47	Q5SQN1	464 aa		14.73	□□□□□ -0.05
PHGDH-231	ENST00000641939	MICALCL	Q6ZW33	695 aa		14.73	□□□□□ -0.05

Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms