RNA–Protein interactions for RNA: ENST00000641847.1

PHGDH-228, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 692 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-228ENST00000641847 CALML6Q8TD86 181 aa9.3□□□□□ -0.92
PHGDH-228ENST00000641847 KLK6Q92876 244 aa9.3□□□□□ -0.92
PHGDH-228ENST00000641847 TBRG4Q969Z0 631 aaKnown RBP eCLIP9.3□□□□□ -0.927e-7■■■□□ 17.2
PHGDH-228ENST00000641847 MRRFQ96E11 262 aaKnown RBP9.3□□□□□ -0.92
PHGDH-228ENST00000641847 DEPDC7Q96QD5 511 aa9.3□□□□□ -0.92
PHGDH-228ENST00000641847 AGAP2Q99490 1192 aa9.3□□□□□ -0.92
PHGDH-228ENST00000641847 ARHGAP9Q9BRR9 750 aa9.3□□□□□ -0.92
PHGDH-228ENST00000641847 RIOK2Q9BVS4 552 aaKnown RBP9.3□□□□□ -0.92
PHGDH-228ENST00000641847 SPATA16Q9BXB7 569 aa9.3□□□□□ -0.92
PHGDH-228ENST00000641847 CDH19Q9H159 772 aa9.3□□□□□ -0.92
PHGDH-228ENST00000641847 FAM83DQ9H4H8 585 aa9.3□□□□□ -0.92
PHGDH-228ENST00000641847 FAM96AQ9H5X1 160 aa9.3□□□□□ -0.92
PHGDH-228ENST00000641847 CRLS1Q9UJA2 301 aa9.3□□□□□ -0.92
PHGDH-228ENST00000641847 SLCO1B1Q9Y6L6 691 aa9.3□□□□□ -0.92
PHGDH-228ENST00000641847 TEP1Q99973 2627 aaKnown RBP9.29□□□□□ -0.92
PHGDH-228ENST00000641847 RELNP78509 3460 aa9.29□□□□□ -0.92
PHGDH-228ENST00000641847 A0A1W2PPC4 97 aa9.29□□□□□ -0.92
PHGDH-228ENST00000641847 SMIM23A6NLE4 172 aa9.29□□□□□ -0.92
PHGDH-228ENST00000641847 ENO4A6NNW6 628 aa9.29□□□□□ -0.92
PHGDH-228ENST00000641847 FADS2P1A8MWK0 482 aa9.29□□□□□ -0.92
PHGDH-228ENST00000641847 POC1B-GALNT4F8VUJ3 575 aa9.29□□□□□ -0.92
PHGDH-228ENST00000641847 K7ENP7 123 aa9.29□□□□□ -0.92
PHGDH-228ENST00000641847 CD3EAPO15446 510 aaKnown RBP9.29□□□□□ -0.92
PHGDH-228ENST00000641847 UGT1A9O60656 530 aa9.29□□□□□ -0.92
PHGDH-228ENST00000641847 MPOP05164 745 aa9.29□□□□□ -0.92
PHGDH-228ENST00000641847 OGNP20774 298 aaKnown RBP9.29□□□□□ -0.92
PHGDH-228ENST00000641847 ACP1P24666 158 aa9.29□□□□□ -0.92
PHGDH-228ENST00000641847 CD38P28907 300 aa9.29□□□□□ -0.92
PHGDH-228ENST00000641847 EPHA8P29322 1005 aaPredicted RBP9.29□□□□□ -0.92
PHGDH-228ENST00000641847 LSSP48449 732 aa9.29□□□□□ -0.92
PHGDH-228ENST00000641847 MPP1Q00013 466 aa9.29□□□□□ -0.92
PHGDH-228ENST00000641847 SGCGQ13326 291 aa9.29□□□□□ -0.92
PHGDH-228ENST00000641847 NFATC2Q13469 925 aa9.29□□□□□ -0.92
PHGDH-228ENST00000641847 ITGA9Q13797 1035 aa9.29□□□□□ -0.92
PHGDH-228ENST00000641847 FGL2Q14314 439 aa9.29□□□□□ -0.92
PHGDH-228ENST00000641847 SEMA3AQ14563 771 aa9.29□□□□□ -0.92
PHGDH-228ENST00000641847 ATP13A5Q4VNC0 1218 aa9.29□□□□□ -0.92
PHGDH-228ENST00000641847 SETMARQ53H47 684 aaPredicted RBP9.29□□□□□ -0.92
PHGDH-228ENST00000641847 AARS2Q5JTZ9 985 aaKnown RBP9.29□□□□□ -0.92
PHGDH-228ENST00000641847 TEDDM1Q5T9Z0 273 aa9.29□□□□□ -0.92
PHGDH-228ENST00000641847 KIAA0895LQ68EN5 471 aa9.29□□□□□ -0.92
PHGDH-228ENST00000641847 RAET1GQ6H3X3 334 aa9.29□□□□□ -0.92
PHGDH-228ENST00000641847 MRNIPQ6NTE8 343 aa9.29□□□□□ -0.92
PHGDH-228ENST00000641847 INO80CQ6PI98 192 aaPredicted RBP9.29□□□□□ -0.92
PHGDH-228ENST00000641847 LRIG3Q6UXM1 1119 aa9.29□□□□□ -0.92
PHGDH-228ENST00000641847 CYS1Q717R9 158 aa9.29□□□□□ -0.92
PHGDH-228ENST00000641847 SNX20Q7Z614 316 aa9.29□□□□□ -0.92
PHGDH-228ENST00000641847 STRA8Q7Z7C7 330 aa9.29□□□□□ -0.92
PHGDH-228ENST00000641847 CILP2Q8IUL8 1156 aa9.29□□□□□ -0.92
PHGDH-228ENST00000641847 DENND6AQ8IWF6 608 aa9.29□□□□□ -0.92
PHGDH-228ENST00000641847 LMNTD2Q8IXW0 634 aa9.29□□□□□ -0.92
PHGDH-228ENST00000641847 TRAM1L1Q8N609 369 aa9.29□□□□□ -0.92
PHGDH-228ENST00000641847 C2CD4AQ8NCU7 369 aaPredicted RBP9.29□□□□□ -0.92
PHGDH-228ENST00000641847 GPR150Q8NGU9 434 aa9.29□□□□□ -0.92
PHGDH-228ENST00000641847 GABPB2Q8TAK5 448 aaPredicted RBP9.29□□□□□ -0.92
PHGDH-228ENST00000641847 EPS8L3Q8TE67 593 aaKnown RBP9.29□□□□□ -0.92
PHGDH-228ENST00000641847 SGSM3Q96HU1 749 aa9.29□□□□□ -0.92
PHGDH-228ENST00000641847 ZIM3Q96PE6 472 aa9.29□□□□□ -0.92
PHGDH-228ENST00000641847 RUFY1Q96T51 708 aa9.29□□□□□ -0.92
PHGDH-228ENST00000641847 PAFAH2Q99487 392 aa9.29□□□□□ -0.92
PHGDH-228ENST00000641847 CCDC77Q9BR77 488 aa9.29□□□□□ -0.92
PHGDH-228ENST00000641847 ZSCAN5AQ9BUG6 496 aa9.29□□□□□ -0.92
PHGDH-228ENST00000641847 C1QTNF7Q9BXJ2 289 aa9.29□□□□□ -0.92
PHGDH-228ENST00000641847 SLC17A9Q9BYT1 436 aa9.29□□□□□ -0.92
PHGDH-228ENST00000641847 ABCG4Q9H172 646 aa9.29□□□□□ -0.92
PHGDH-228ENST00000641847 ASB8Q9H765 288 aa9.29□□□□□ -0.92
PHGDH-228ENST00000641847 ERVMER34-1Q9H9K5 563 aa9.29□□□□□ -0.92
PHGDH-228ENST00000641847 POLR1BQ9H9Y6 1135 aa9.29□□□□□ -0.92
PHGDH-228ENST00000641847 UGT1A7Q9HAW7 530 aa9.29□□□□□ -0.92
PHGDH-228ENST00000641847 UGT1A10Q9HAW8 530 aa9.29□□□□□ -0.92
PHGDH-228ENST00000641847 UGT1A8Q9HAW9 530 aa9.29□□□□□ -0.92
PHGDH-228ENST00000641847 FZD3Q9NPG1 666 aa9.29□□□□□ -0.92
PHGDH-228ENST00000641847 EVA1BQ9NVM1 165 aa9.29□□□□□ -0.92
PHGDH-228ENST00000641847 ZNF446Q9NWS9 450 aa9.29□□□□□ -0.92
PHGDH-228ENST00000641847 NSMCE4AQ9NXX6 385 aa9.29□□□□□ -0.92
PHGDH-228ENST00000641847 VPS18Q9P253 973 aa9.29□□□□□ -0.92
PHGDH-228ENST00000641847 NUMA1Q14980 2115 aa9.29□□□□□ -0.92
PHGDH-228ENST00000641847 DOPEY2Q9Y3R5 2298 aa9.28□□□□□ -0.92
PHGDH-228ENST00000641847 C10orf142B7Z368 130 aa9.28□□□□□ -0.92
PHGDH-228ENST00000641847 TERTO14746 1132 aaKnown RBP9.28□□□□□ -0.92
PHGDH-228ENST00000641847 RAD51BO15315 384 aa9.28□□□□□ -0.92
PHGDH-228ENST00000641847 MAGEC1O60732 1142 aa9.28□□□□□ -0.92
PHGDH-228ENST00000641847 SASH3O75995 380 aa9.28□□□□□ -0.92
PHGDH-228ENST00000641847 SOD1P00441 154 aa9.28□□□□□ -0.92
PHGDH-228ENST00000641847 INHBAP08476 426 aa9.28□□□□□ -0.92
PHGDH-228ENST00000641847 UGT1A6P19224 532 aa9.28□□□□□ -0.92
PHGDH-228ENST00000641847 UGT1A1P22309 533 aa9.28□□□□□ -0.92
PHGDH-228ENST00000641847 UGT1A4P22310 534 aa9.28□□□□□ -0.92
PHGDH-228ENST00000641847 GCAP28676 217 aa9.28□□□□□ -0.92
PHGDH-228ENST00000641847 CA5AP35218 305 aa9.28□□□□□ -0.92
PHGDH-228ENST00000641847 UGT1A3P35503 534 aa9.28□□□□□ -0.92
PHGDH-228ENST00000641847 UGT1A5P35504 534 aa9.28□□□□□ -0.92
PHGDH-228ENST00000641847 GP5P40197 560 aa9.28□□□□□ -0.92
PHGDH-228ENST00000641847 MSH2P43246 934 aa9.28□□□□□ -0.92
PHGDH-228ENST00000641847 GPR1P46091 355 aa9.28□□□□□ -0.92
PHGDH-228ENST00000641847 SLCO1A2P46721 670 aa9.28□□□□□ -0.92
PHGDH-228ENST00000641847 CD151P48509 253 aa9.28□□□□□ -0.92
PHGDH-228ENST00000641847 CDKN1CP49918 316 aaPredicted RBP9.28□□□□□ -0.92
PHGDH-228ENST00000641847 EIF3BP55884 814 aaKnown RBP9.28□□□□□ -0.92
PHGDH-228ENST00000641847 DAB2P98082 770 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms