RNA–Protein interactions for RNA: ENST00000640388.1

ATM-230, Transcript of ATM serine/threonine kinase, humanhuman

TSL 5 BASIC

Gene ATM, Length 578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-230ENST00000640388 UBTD1Q9HAC8 227 aa3.14□□□□□ -1.91
ATM-230ENST00000640388 ASAH2Q9NR71 780 aa3.14□□□□□ -1.91
ATM-230ENST00000640388 TAS2R10Q9NYW0 307 aa3.14□□□□□ -1.91
ATM-230ENST00000640388 CAPN7Q9Y6W3 813 aa3.14□□□□□ -1.91
ATM-230ENST00000640388 PIEZO2Q9H5I5 2752 aa3.14□□□□□ -1.91
ATM-230ENST00000640388 PDS5AQ29RF7 1337 aaKnown RBP3.14□□□□□ -1.91
ATM-230ENST00000640388 FAM205AQ6ZU69 1335 aa3.14□□□□□ -1.91
ATM-230ENST00000640388 MYO9BQ13459 2157 aa3.14□□□□□ -1.91
ATM-230ENST00000640388 POLR3AO14802 1390 aaPredicted RBP3.13□□□□□ -1.91
ATM-230ENST00000640388 KIF24Q5T7B8 1368 aa3.13□□□□□ -1.91
ATM-230ENST00000640388 A0A1W2PPH5 198 aa3.13□□□□□ -1.91
ATM-230ENST00000640388 CCDC189A1A4V9 331 aa3.13□□□□□ -1.91
ATM-230ENST00000640388 VCYO14598 125 aa3.13□□□□□ -1.91
ATM-230ENST00000640388 TGFB1I1O43294 461 aa3.13□□□□□ -1.91
ATM-230ENST00000640388 FTCDO95954 541 aa3.13□□□□□ -1.91
ATM-230ENST00000640388 KRT10P13645 584 aa3.13□□□□□ -1.91
ATM-230ENST00000640388 IL7RP16871 459 aa3.13□□□□□ -1.91
ATM-230ENST00000640388 AMD1P17707 334 aa3.13□□□□□ -1.91
ATM-230ENST00000640388 DGKAP23743 735 aa3.13□□□□□ -1.91
ATM-230ENST00000640388 RRM1P23921 792 aa3.13□□□□□ -1.91
ATM-230ENST00000640388 TMPOP42166 694 aaKnown RBP3.13□□□□□ -1.91
ATM-230ENST00000640388 PIP4K2AP48426 406 aaPredicted RBP3.13□□□□□ -1.91
ATM-230ENST00000640388 CLCNKAP51800 687 aa3.13□□□□□ -1.91
ATM-230ENST00000640388 ZNF132P52740 706 aa3.13□□□□□ -1.91
ATM-230ENST00000640388 RARSP54136 660 aaKnown RBP3.13□□□□□ -1.91
ATM-230ENST00000640388 RIPPLY3P57055 190 aa3.13□□□□□ -1.91
ATM-230ENST00000640388 ACSM2AQ08AH3 577 aa3.13□□□□□ -1.91
ATM-230ENST00000640388 ILF3Q12906 894 aaKnown RBP eCLIP3.13□□□□□ -1.91
ATM-230ENST00000640388 RALBP1Q15311 655 aa3.13□□□□□ -1.91
ATM-230ENST00000640388 ZRSR1Q15695 479 aaKnown RBP3.13□□□□□ -1.91
ATM-230ENST00000640388 USP41Q3LFD5 358 aa3.13□□□□□ -1.91
ATM-230ENST00000640388 C9orf50Q5SZB4 431 aa3.13□□□□□ -1.91
ATM-230ENST00000640388 C6orf141Q5SZD1 244 aa3.13□□□□□ -1.91
ATM-230ENST00000640388 GPATCH4Q5T3I0 446 aaKnown RBP3.13□□□□□ -1.91
ATM-230ENST00000640388 INTS11Q5TA45 600 aaKnown RBP3.13□□□□□ -1.91
ATM-230ENST00000640388 SIGIRRQ6IA17 410 aa3.13□□□□□ -1.91
ATM-230ENST00000640388 DUS1LQ6P1R4 473 aaKnown RBP3.13□□□□□ -1.91
ATM-230ENST00000640388 PQLC2Q6ZP29 291 aa3.13□□□□□ -1.91
ATM-230ENST00000640388 C9orf139Q6ZV77 190 aa3.13□□□□□ -1.91
ATM-230ENST00000640388 ZNF771Q7L3S4 317 aaPredicted RBP3.13□□□□□ -1.91
ATM-230ENST00000640388 ADSSL1Q8N142 457 aa3.13□□□□□ -1.91
ATM-230ENST00000640388 MAB21L3Q8N8X9 362 aa3.13□□□□□ -1.91
ATM-230ENST00000640388 KCNH5Q8NCM2 988 aa3.13□□□□□ -1.91
ATM-230ENST00000640388 OR2AK2Q8NG84 335 aa3.13□□□□□ -1.91
ATM-230ENST00000640388 MAGEC3Q8TD91 643 aa3.13□□□□□ -1.91
ATM-230ENST00000640388 KCNG4Q8TDN1 519 aa3.13□□□□□ -1.91
ATM-230ENST00000640388 DUSP19Q8WTR2 217 aa3.13□□□□□ -1.91
ATM-230ENST00000640388 U2AF1L4Q8WU68 220 aaKnown RBP3.13□□□□□ -1.91
ATM-230ENST00000640388 EVI5LQ96CN4 794 aa3.13□□□□□ -1.91
ATM-230ENST00000640388 PIP5K1AQ99755 562 aa3.13□□□□□ -1.91
ATM-230ENST00000640388 CMKLR1Q99788 373 aa3.13□□□□□ -1.91
ATM-230ENST00000640388 TMEM47Q9BQJ4 181 aa3.13□□□□□ -1.91
ATM-230ENST00000640388 C1QTNF5Q9BXJ0 243 aa3.13□□□□□ -1.91
ATM-230ENST00000640388 SPRY4Q9C004 299 aa3.13□□□□□ -1.91
ATM-230ENST00000640388 VPS33BQ9H267 617 aa3.13□□□□□ -1.91
ATM-230ENST00000640388 EBF2Q9HAK2 575 aa3.13□□□□□ -1.91
ATM-230ENST00000640388 PCDH9Q9HC56 1237 aa3.13□□□□□ -1.91
ATM-230ENST00000640388 MMP25Q9NPA2 562 aa3.13□□□□□ -1.91
ATM-230ENST00000640388 TCF7L2Q9NQB0 619 aa3.13□□□□□ -1.91
ATM-230ENST00000640388 MCM9Q9NXL9 1143 aa3.13□□□□□ -1.91
ATM-230ENST00000640388 LOXL2Q9Y4K0 774 aa3.13□□□□□ -1.91
ATM-230ENST00000640388 CGNL1Q0VF96 1302 aa3.13□□□□□ -1.91
ATM-230ENST00000640388 MAST2Q6P0Q8 1798 aa3.12□□□□□ -1.91
ATM-230ENST00000640388 FAM237AA0A1B0GTK4 181 aa3.12□□□□□ -1.91
ATM-230ENST00000640388 GOLGA6L9A6NEM1 432 aa3.12□□□□□ -1.91
ATM-230ENST00000640388 NPIPB15A6NHN6 443 aaPredicted RBP3.12□□□□□ -1.91
ATM-230ENST00000640388 BMPR1BO00238 502 aa3.12□□□□□ -1.91
ATM-230ENST00000640388 XPNPEP2O43895 674 aa3.12□□□□□ -1.91
ATM-230ENST00000640388 IGKV3-20P01619 116 aa3.12□□□□□ -1.91
ATM-230ENST00000640388 IGLV2-11P01706 119 aa3.12□□□□□ -1.91
ATM-230ENST00000640388 SPARCP09486 303 aa3.12□□□□□ -1.91
ATM-230ENST00000640388 CCL5P13501 91 aa3.12□□□□□ -1.91
ATM-230ENST00000640388 ZNF182P17025 639 aaPredicted RBP3.12□□□□□ -1.91
ATM-230ENST00000640388 KCNA5P22460 613 aa3.12□□□□□ -1.91
ATM-230ENST00000640388 PAX3P23760 479 aa3.12□□□□□ -1.91
ATM-230ENST00000640388 HMGB2P26583 209 aaKnown RBP3.12□□□□□ -1.91
ATM-230ENST00000640388 ICAM3P32942 547 aa3.12□□□□□ -1.91
ATM-230ENST00000640388 IL15P40933 162 aaPredicted RBP3.12□□□□□ -1.91
ATM-230ENST00000640388 PDE1BQ01064 536 aa3.12□□□□□ -1.91
ATM-230ENST00000640388 RELQ04864 619 aaPredicted RBP3.12□□□□□ -1.91
ATM-230ENST00000640388 HYAL1Q12794 435 aa3.12□□□□□ -1.91
ATM-230ENST00000640388 TMEM115Q12893 351 aaPredicted RBP3.12□□□□□ -1.91
ATM-230ENST00000640388 OLIG2Q13516 323 aa3.12□□□□□ -1.91
ATM-230ENST00000640388 DCTN2Q13561 401 aaKnown RBP3.12□□□□□ -1.91
ATM-230ENST00000640388 FRG1Q14331 258 aaKnown RBP3.12□□□□□ -1.91
ATM-230ENST00000640388 KCNT1Q5JUK3 1230 aa3.12□□□□□ -1.91
ATM-230ENST00000640388 IRAK1BP1Q5VVH5 260 aa3.12□□□□□ -1.91
ATM-230ENST00000640388 NAXEQ8NCW5 288 aa3.12□□□□□ -1.91
ATM-230ENST00000640388 SLC20A1Q8WUM9 679 aa3.12□□□□□ -1.91
ATM-230ENST00000640388 SMARCE1Q969G3 411 aa3.12□□□□□ -1.91
ATM-230ENST00000640388 ABTB1Q969K4 478 aaPredicted RBP3.12□□□□□ -1.91
ATM-230ENST00000640388 ORAI1Q96D31 301 aa3.12□□□□□ -1.91
ATM-230ENST00000640388 FEM1CQ96JP0 617 aa3.12□□□□□ -1.91
ATM-230ENST00000640388 TTC14Q96N46 770 aa3.12□□□□□ -1.91
ATM-230ENST00000640388 MTERF1Q99551 399 aaKnown RBP3.12□□□□□ -1.91
ATM-230ENST00000640388 EPYCQ99645 322 aa3.12□□□□□ -1.91
ATM-230ENST00000640388 SLC26A6Q9BXS9 759 aa3.12□□□□□ -1.91
ATM-230ENST00000640388 CSTL1Q9H114 145 aa3.12□□□□□ -1.91
ATM-230ENST00000640388 RANBP17Q9H2T7 1088 aaKnown RBP3.12□□□□□ -1.91
ATM-230ENST00000640388 SLC28A3Q9HAS3 691 aa3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms