RNA–Protein interactions for RNA: ENST00000638725.1

SNIP1-204, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 2

Gene SNIP1, Length 2,761 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-204ENST00000638725 OR52B6Q8NGF0 335 aa10.79□□□□□ -0.68
SNIP1-204ENST00000638725 FBXO30Q8TB52 745 aa10.79□□□□□ -0.68
SNIP1-204ENST00000638725 BRSK1Q8TDC3 778 aa10.79□□□□□ -0.68
SNIP1-204ENST00000638725 SLC39A13Q96H72 371 aa10.79□□□□□ -0.68
SNIP1-204ENST00000638725 MBOAT4Q96T53 435 aa10.79□□□□□ -0.68
SNIP1-204ENST00000638725 CGREF1Q99674 301 aa10.79□□□□□ -0.68
SNIP1-204ENST00000638725 AMBRA1Q9C0C7 1298 aa10.79□□□□□ -0.68
SNIP1-204ENST00000638725 FAM118AQ9NWS6 357 aa10.79□□□□□ -0.68
SNIP1-204ENST00000638725 FNIP2Q9P278 1114 aa10.79□□□□□ -0.68
SNIP1-204ENST00000638725 NLRC5Q86WI3 1866 aa10.79□□□□□ -0.68
SNIP1-204ENST00000638725 PTPRDP23468 1912 aa10.79□□□□□ -0.68
SNIP1-204ENST00000638725 SYCE1LA8MT33 242 aa10.79□□□□□ -0.68
SNIP1-204ENST00000638725 STX16O14662 325 aa10.79□□□□□ -0.68
SNIP1-204ENST00000638725 BCAS1O75363 584 aaPredicted RBP10.79□□□□□ -0.68
SNIP1-204ENST00000638725 SOAT2O75908 522 aa10.79□□□□□ -0.68
SNIP1-204ENST00000638725 CYP11A1P05108 521 aa10.79□□□□□ -0.68
SNIP1-204ENST00000638725 GGT1P19440 569 aa10.79□□□□□ -0.68
SNIP1-204ENST00000638725 HTR1BP28222 390 aa10.79□□□□□ -0.68
SNIP1-204ENST00000638725 GPR15P49685 360 aa10.79□□□□□ -0.68
SNIP1-204ENST00000638725 CDKN1CP49918 316 aaPredicted RBP10.79□□□□□ -0.68
SNIP1-204ENST00000638725 HK3P52790 923 aa10.79□□□□□ -0.68
SNIP1-204ENST00000638725 TBX4P57082 545 aa10.79□□□□□ -0.68
SNIP1-204ENST00000638725 TSPY1Q01534 308 aa10.79□□□□□ -0.68
SNIP1-204ENST00000638725 DPY19L1Q2PZI1 675 aa10.79□□□□□ -0.68
SNIP1-204ENST00000638725 ATP6AP1LQ52LC2 224 aa10.79□□□□□ -0.68
SNIP1-204ENST00000638725 C6orf141Q5SZD1 244 aa10.79□□□□□ -0.68
SNIP1-204ENST00000638725 ENPP6Q6UWR7 440 aa10.79□□□□□ -0.68
SNIP1-204ENST00000638725 SLC16A12Q6ZSM3 486 aa10.79□□□□□ -0.68
SNIP1-204ENST00000638725 GPRIN3Q6ZVF9 776 aa10.79□□□□□ -0.68
SNIP1-204ENST00000638725 EFL1Q7Z2Z2 1120 aaKnown RBP10.79□□□□□ -0.68
SNIP1-204ENST00000638725 RBM23Q86U06 439 aaKnown RBP10.79□□□□□ -0.68
SNIP1-204ENST00000638725 ZDHHC13Q8IUH4 622 aa10.79□□□□□ -0.68
SNIP1-204ENST00000638725 OR56A4Q8NGH8 313 aa10.79□□□□□ -0.68
SNIP1-204ENST00000638725 FIG4Q92562 907 aa10.79□□□□□ -0.68
SNIP1-204ENST00000638725 HDAC2Q92769 488 aaKnown RBP10.79□□□□□ -0.68
SNIP1-204ENST00000638725 FATE1Q969F0 183 aa10.79□□□□□ -0.68
SNIP1-204ENST00000638725 ERLEC1Q96DZ1 483 aa10.79□□□□□ -0.68
SNIP1-204ENST00000638725 POLR1EQ9GZS1 481 aaKnown RBP10.79□□□□□ -0.68
SNIP1-204ENST00000638725 ACTL8Q9H568 366 aa10.79□□□□□ -0.68
SNIP1-204ENST00000638725 TLR6Q9Y2C9 796 aa10.79□□□□□ -0.68
SNIP1-204ENST00000638725 ACTL7AQ9Y615 435 aa10.79□□□□□ -0.68
SNIP1-204ENST00000638725 ANKRD36A6QL64 1941 aa10.79□□□□□ -0.68
SNIP1-204ENST00000638725 DOCK4Q8N1I0 1966 aa10.79□□□□□ -0.68
SNIP1-204ENST00000638725 G3V2T6 193 aa10.78□□□□□ -0.68
SNIP1-204ENST00000638725 MLYCDO95822 493 aa10.78□□□□□ -0.68
SNIP1-204ENST00000638725 G6PDP11413 515 aa10.78□□□□□ -0.68
SNIP1-204ENST00000638725 HALP42357 657 aa10.78□□□□□ -0.68
SNIP1-204ENST00000638725 TRIM16LQ309B1 348 aa10.78□□□□□ -0.68
SNIP1-204ENST00000638725 FBXL22Q6P050 247 aa10.78□□□□□ -0.68
SNIP1-204ENST00000638725 CRTC3Q6UUV7 619 aa10.78□□□□□ -0.68
SNIP1-204ENST00000638725 PLEKHH3Q7Z736 793 aa10.78□□□□□ -0.68
SNIP1-204ENST00000638725 DPP10Q8N608 796 aa10.78□□□□□ -0.68
SNIP1-204ENST00000638725 MAGED4Q96JG8 741 aa10.78□□□□□ -0.68
SNIP1-204ENST00000638725 SMIM14Q96QK8 99 aa10.78□□□□□ -0.68
SNIP1-204ENST00000638725 EXD2Q9NVH0 621 aa10.78□□□□□ -0.68
SNIP1-204ENST00000638725 COMMD8Q9NX08 183 aa10.78□□□□□ -0.68
SNIP1-204ENST00000638725 SEPT3Q9UH03 358 aa10.78□□□□□ -0.68
SNIP1-204ENST00000638725 DAPK2Q9UIK4 370 aa10.78□□□□□ -0.68
SNIP1-204ENST00000638725 PDE10AQ9Y233 779 aa10.78□□□□□ -0.68
SNIP1-204ENST00000638725 B3GNT3Q9Y2A9 372 aa10.78□□□□□ -0.68
SNIP1-204ENST00000638725 GIT1Q9Y2X7 761 aa10.78□□□□□ -0.68
SNIP1-204ENST00000638725 NEUROG3Q9Y4Z2 214 aa10.78□□□□□ -0.68
SNIP1-204ENST00000638725 SPO11Q9Y5K1 396 aa10.78□□□□□ -0.68
SNIP1-204ENST00000638725 PATJQ8NI35 1801 aa10.78□□□□□ -0.68
SNIP1-204ENST00000638725 TRIM43BA6NCK2 446 aa10.78□□□□□ -0.68
SNIP1-204ENST00000638725 E2F3O00716 465 aa10.78□□□□□ -0.68
SNIP1-204ENST00000638725 RAMP2O60895 175 aa10.78□□□□□ -0.68
SNIP1-204ENST00000638725 NDUFS3O75489 264 aa10.78□□□□□ -0.68
SNIP1-204ENST00000638725 HMBSP08397 361 aa10.78□□□□□ -0.68
SNIP1-204ENST00000638725 RAD23AP54725 363 aa10.78□□□□□ -0.68
SNIP1-204ENST00000638725 ERVPABLB-1P60509 514 aa10.78□□□□□ -0.68
SNIP1-204ENST00000638725 MRPS6P82932 125 aaKnown RBP10.78□□□□□ -0.68
SNIP1-204ENST00000638725 CD47Q08722 323 aa10.78□□□□□ -0.68
SNIP1-204ENST00000638725 EFEMP1Q12805 493 aa10.78□□□□□ -0.68
SNIP1-204ENST00000638725 KCNAB2Q13303 367 aa10.78□□□□□ -0.68
SNIP1-204ENST00000638725 ZNF235Q14590 738 aa10.78□□□□□ -0.68
SNIP1-204ENST00000638725 PTPRNQ16849 979 aa10.78□□□□□ -0.68
SNIP1-204ENST00000638725 TTC23Q5W5X9 447 aa10.78□□□□□ -0.68
SNIP1-204ENST00000638725 LAIR2Q6ISS4 152 aa10.78□□□□□ -0.68
SNIP1-204ENST00000638725 LETMD1Q6P1Q0 360 aa10.78□□□□□ -0.68
SNIP1-204ENST00000638725 FAM126BQ8IXS8 530 aa10.78□□□□□ -0.68
SNIP1-204ENST00000638725 SIDT2Q8NBJ9 832 aaKnown RBP10.78□□□□□ -0.68
SNIP1-204ENST00000638725 TAMM41Q96BW9 452 aa10.78□□□□□ -0.68
SNIP1-204ENST00000638725 SDCCAG3Q96C92 435 aa10.78□□□□□ -0.68
SNIP1-204ENST00000638725 SLC10A4Q96EP9 437 aa10.78□□□□□ -0.68
SNIP1-204ENST00000638725 AURKBQ96GD4 344 aaPredicted RBP10.78□□□□□ -0.68
SNIP1-204ENST00000638725 SH3YL1Q96HL8 342 aaPredicted RBP10.78□□□□□ -0.68
SNIP1-204ENST00000638725 CCDC138Q96M89 665 aa10.78□□□□□ -0.68
SNIP1-204ENST00000638725 ZNF583Q96ND8 569 aa10.78□□□□□ -0.68
SNIP1-204ENST00000638725 ZNF347Q96SE7 839 aa10.78□□□□□ -0.68
SNIP1-204ENST00000638725 C17orf80Q9BSJ5 609 aa10.78□□□□□ -0.68
SNIP1-204ENST00000638725 C1QTNF3Q9BXJ4 246 aa10.78□□□□□ -0.68
SNIP1-204ENST00000638725 ABI2Q9NYB9 513 aaPredicted RBP10.78□□□□□ -0.68
SNIP1-204ENST00000638725 CD274Q9NZQ7 290 aa10.78□□□□□ -0.68
SNIP1-204ENST00000638725 C16orf96A6NNT2 1141 aa10.77□□□□□ -0.68
SNIP1-204ENST00000638725 TOR1BO14657 336 aa10.77□□□□□ -0.68
SNIP1-204ENST00000638725 KLK8O60259 260 aa10.77□□□□□ -0.68
SNIP1-204ENST00000638725 TBC1D4O60343 1298 aa10.77□□□□□ -0.68
SNIP1-204ENST00000638725 DFNA5O60443 496 aa10.77□□□□□ -0.68
SNIP1-204ENST00000638725 MAN1A2O60476 641 aa10.77□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms