RNA–Protein interactions for RNA: ENST00000638142.2

SYNGAP1-227, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 2,499 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-227ENST00000638142 DDHD1Q8NEL9 900 aa19.87■□□□□ 0.77
SYNGAP1-227ENST00000638142 KLHDC9Q8NEP7 349 aa19.87■□□□□ 0.77
SYNGAP1-227ENST00000638142 MDGA1Q8NFP4 955 aa19.87■□□□□ 0.77
SYNGAP1-227ENST00000638142 ITFG1Q8TB96 612 aa19.87■□□□□ 0.77
SYNGAP1-227ENST00000638142 LINGO1Q96FE5 620 aa19.87■□□□□ 0.77
SYNGAP1-227ENST00000638142 RDH12Q96NR8 316 aa19.87■□□□□ 0.77
SYNGAP1-227ENST00000638142 CGREF1Q99674 301 aa19.87■□□□□ 0.77
SYNGAP1-227ENST00000638142 ING2Q9H160 280 aa19.87■□□□□ 0.77
SYNGAP1-227ENST00000638142 MAGEH1Q9H213 219 aa19.87■□□□□ 0.77
SYNGAP1-227ENST00000638142 COMMD8Q9NX08 183 aa19.87■□□□□ 0.77
SYNGAP1-227ENST00000638142 SH3BP1Q9Y3L3 701 aa19.87■□□□□ 0.77
SYNGAP1-227ENST00000638142 SEC14L2O76054 403 aa19.86■□□□□ 0.77
SYNGAP1-227ENST00000638142 EEF1B2P24534 225 aaKnown RBP19.86■□□□□ 0.77
SYNGAP1-227ENST00000638142 ERVPABLB-1P60509 514 aa19.86■□□□□ 0.77
SYNGAP1-227ENST00000638142 NFATC3Q12968 1075 aa19.86■□□□□ 0.77
SYNGAP1-227ENST00000638142 TGFBIQ15582 683 aa19.86■□□□□ 0.77
SYNGAP1-227ENST00000638142 ANKRD26P1Q6NSI1 321 aa19.86■□□□□ 0.77
SYNGAP1-227ENST00000638142 CD200R1Q8TD46 325 aa19.86■□□□□ 0.77
SYNGAP1-227ENST00000638142 EEF1AKMT1Q8WVE0 214 aa19.86■□□□□ 0.77
SYNGAP1-227ENST00000638142 TMBIM1Q969X1 311 aa19.86■□□□□ 0.77
SYNGAP1-227ENST00000638142 ESAMQ96AP7 390 aa19.86■□□□□ 0.77
SYNGAP1-227ENST00000638142 NRBF2Q96F24 287 aa19.86■□□□□ 0.77
SYNGAP1-227ENST00000638142 PPM1MQ96MI6 270 aa19.86■□□□□ 0.77
SYNGAP1-227ENST00000638142 CINPQ9BW66 212 aaPredicted RBP19.86■□□□□ 0.77
SYNGAP1-227ENST00000638142 ASB1Q9Y576 335 aa19.86■□□□□ 0.77
SYNGAP1-227ENST00000638142 IQCA1LA6NCM1 817 aa19.86■□□□□ 0.77
SYNGAP1-227ENST00000638142 TMEM221A6NGB7 291 aa19.86■□□□□ 0.77
SYNGAP1-227ENST00000638142 TMEM189-UBE2V1I3L0A0 370 aa19.86■□□□□ 0.77
SYNGAP1-227ENST00000638142 B4GALT3O60512 393 aa19.86■□□□□ 0.77
SYNGAP1-227ENST00000638142 NIPSNAP2O75323 286 aa19.86■□□□□ 0.77
SYNGAP1-227ENST00000638142 TFPTP0C1Z6 253 aa19.86■□□□□ 0.77
SYNGAP1-227ENST00000638142 GGT1P19440 569 aa19.86■□□□□ 0.77
SYNGAP1-227ENST00000638142 CD247P20963 164 aa19.86■□□□□ 0.77
SYNGAP1-227ENST00000638142 ELK4P28324 431 aa19.86■□□□□ 0.77
SYNGAP1-227ENST00000638142 POLR2IP36954 125 aaKnown RBP19.86■□□□□ 0.77
SYNGAP1-227ENST00000638142 PHEXP78562 749 aa19.86■□□□□ 0.77
SYNGAP1-227ENST00000638142 CHRNB3Q05901 458 aa19.86■□□□□ 0.77
SYNGAP1-227ENST00000638142 RBM48Q5RL73 367 aaKnown RBP19.86■□□□□ 0.77
SYNGAP1-227ENST00000638142 DCDC5Q6ZRR9 648 aa19.86■□□□□ 0.77
SYNGAP1-227ENST00000638142 CLEC4FQ8N1N0 589 aa19.86■□□□□ 0.77
SYNGAP1-227ENST00000638142 OR52B6Q8NGF0 335 aa19.86■□□□□ 0.77
SYNGAP1-227ENST00000638142 GPR152Q8TDT2 470 aa19.86■□□□□ 0.77
SYNGAP1-227ENST00000638142 KCNJ9Q92806 393 aa19.86■□□□□ 0.77
SYNGAP1-227ENST00000638142 ACDQ96AP0 544 aa19.86■□□□□ 0.77
SYNGAP1-227ENST00000638142 BLOC1S6Q9UL45 172 aa19.86■□□□□ 0.77
SYNGAP1-227ENST00000638142 PCDHGA4Q9Y5G9 962 aa19.86■□□□□ 0.77
SYNGAP1-227ENST00000638142 A0A0D9SEW6 157 aa19.85■□□□□ 0.77
SYNGAP1-227ENST00000638142 F5H5T6 163 aa19.85■□□□□ 0.77
SYNGAP1-227ENST00000638142 GMNNO75496 209 aa19.85■□□□□ 0.77
SYNGAP1-227ENST00000638142 LPOP22079 712 aaPredicted RBP19.85■□□□□ 0.77
SYNGAP1-227ENST00000638142 UGT1A1P22309 533 aa19.85■□□□□ 0.77
SYNGAP1-227ENST00000638142 UGT1A4P22310 534 aa19.85■□□□□ 0.77
SYNGAP1-227ENST00000638142 MAP4P27816 1152 aaKnown RBP19.85■□□□□ 0.77
SYNGAP1-227ENST00000638142 UGT1A3P35503 534 aa19.85■□□□□ 0.77
SYNGAP1-227ENST00000638142 UGT1A5P35504 534 aa19.85■□□□□ 0.77
SYNGAP1-227ENST00000638142 CDKN1CP49918 316 aaPredicted RBP19.85■□□□□ 0.77
SYNGAP1-227ENST00000638142 CLCN4P51793 760 aa19.85■□□□□ 0.77
SYNGAP1-227ENST00000638142 MTPNP58546 118 aa19.85■□□□□ 0.77
SYNGAP1-227ENST00000638142 PWP1Q13610 501 aa19.85■□□□□ 0.77
SYNGAP1-227ENST00000638142 ZIK1Q3SY52 487 aaPredicted RBP19.85■□□□□ 0.77
SYNGAP1-227ENST00000638142 CTSL3PQ5NE16 218 aa19.85■□□□□ 0.77
SYNGAP1-227ENST00000638142 THAP5Q7Z6K1 395 aa19.85■□□□□ 0.77
SYNGAP1-227ENST00000638142 PIANPQ8IYJ0 282 aa19.85■□□□□ 0.77
SYNGAP1-227ENST00000638142 OR8J3Q8NGG0 315 aa19.85■□□□□ 0.77
SYNGAP1-227ENST00000638142 CCDC115Q96NT0 180 aa19.85■□□□□ 0.77
SYNGAP1-227ENST00000638142 FANCEQ9HB96 536 aa19.85■□□□□ 0.77
SYNGAP1-227ENST00000638142 NUDT4Q9NZJ9 180 aa19.85■□□□□ 0.77
SYNGAP1-227ENST00000638142 PAIP2BQ9ULR5 123 aaKnown RBP19.85■□□□□ 0.77
SYNGAP1-227ENST00000638142 ST14Q9Y5Y6 855 aa19.85■□□□□ 0.77
SYNGAP1-227ENST00000638142 INSIG1O15503 277 aa19.85■□□□□ 0.77
SYNGAP1-227ENST00000638142 ABCB7O75027 752 aa19.85■□□□□ 0.77
SYNGAP1-227ENST00000638142 ZBTB11O95625 1053 aaPredicted RBP19.85■□□□□ 0.77
SYNGAP1-227ENST00000638142 MATN1P21941 496 aa19.85■□□□□ 0.77
SYNGAP1-227ENST00000638142 SHMT2P34897 504 aa19.85■□□□□ 0.77
SYNGAP1-227ENST00000638142 GNA12Q03113 381 aa19.85■□□□□ 0.77
SYNGAP1-227ENST00000638142 TAF10Q12962 218 aa19.85■□□□□ 0.77
SYNGAP1-227ENST00000638142 BNIP3Q12983 259 aa19.85■□□□□ 0.77
SYNGAP1-227ENST00000638142 C5orf22Q49AR2 442 aa19.85■□□□□ 0.77
SYNGAP1-227ENST00000638142 PSAPL1Q6NUJ1 521 aa19.85■□□□□ 0.77
SYNGAP1-227ENST00000638142 LETMD1Q6P1Q0 360 aa19.85■□□□□ 0.77
SYNGAP1-227ENST00000638142 CYP20A1Q6UW02 462 aa19.85■□□□□ 0.77
SYNGAP1-227ENST00000638142 XKR5Q6UX68 686 aa19.85■□□□□ 0.77
SYNGAP1-227ENST00000638142 FKBP9P1Q75LS8 142 aa19.85■□□□□ 0.77
SYNGAP1-227ENST00000638142 ITIH5Q86UX2 942 aa19.85■□□□□ 0.77
SYNGAP1-227ENST00000638142 ZNF280BQ86YH2 543 aa19.85■□□□□ 0.77
SYNGAP1-227ENST00000638142 FAM126BQ8IXS8 530 aa19.85■□□□□ 0.77
SYNGAP1-227ENST00000638142 LGI2Q8N0V4 545 aa19.85■□□□□ 0.77
SYNGAP1-227ENST00000638142 METTL6Q8TCB7 284 aa19.85■□□□□ 0.77
SYNGAP1-227ENST00000638142 AURKBQ96GD4 344 aaPredicted RBP19.85■□□□□ 0.77
SYNGAP1-227ENST00000638142 ACTL8Q9H568 366 aa19.85■□□□□ 0.77
SYNGAP1-227ENST00000638142 HPS4Q9NQG7 708 aa19.85■□□□□ 0.77
SYNGAP1-227ENST00000638142 UBA2Q9UBT2 640 aaPredicted RBP19.85■□□□□ 0.77
SYNGAP1-227ENST00000638142 COQ6Q9Y2Z9 468 aa19.85■□□□□ 0.77
SYNGAP1-227ENST00000638142 COMMD10Q9Y6G5 202 aa19.85■□□□□ 0.77
SYNGAP1-227ENST00000638142 G6PDP11413 515 aa19.84■□□□□ 0.77
SYNGAP1-227ENST00000638142 RELAQ04206 551 aa19.84■□□□□ 0.77
SYNGAP1-227ENST00000638142 DSC1Q08554 894 aa19.84■□□□□ 0.77
SYNGAP1-227ENST00000638142 EPS8Q12929 822 aa19.84■□□□□ 0.77
SYNGAP1-227ENST00000638142 SELPLGQ14242 412 aa19.84■□□□□ 0.77
SYNGAP1-227ENST00000638142 GLB1LQ6UWU2 654 aa19.84■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms