RNA–Protein interactions for RNA: ENST00000638114.1

CACNA1A-259, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 3

Gene CACNA1A, Length 517 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-259ENST00000638114 PLXDC1Q8IUK5 500 aa16.45■□□□□ 0.22
CACNA1A-259ENST00000638114 BEND7Q8N7W2 519 aaPredicted RBP16.45■□□□□ 0.22
CACNA1A-259ENST00000638114 NAT14Q8WUY8 206 aa16.45■□□□□ 0.22
CACNA1A-259ENST00000638114 PMEPA1Q969W9 287 aa16.45■□□□□ 0.22
CACNA1A-259ENST00000638114 SGF29Q96ES7 293 aa16.45■□□□□ 0.22
CACNA1A-259ENST00000638114 ZNF514Q96K75 400 aaPredicted RBP16.45■□□□□ 0.22
CACNA1A-259ENST00000638114 B3GNT4Q9C0J1 378 aa16.45■□□□□ 0.22
CACNA1A-259ENST00000638114 SLC39A1Q9NY26 324 aa16.45■□□□□ 0.22
CACNA1A-259ENST00000638114 PSMD13Q9UNM6 376 aa16.45■□□□□ 0.22
CACNA1A-259ENST00000638114 WDR37Q9Y2I8 494 aa16.45■□□□□ 0.22
CACNA1A-259ENST00000638114 PCDHB11Q9Y5F2 797 aa16.45■□□□□ 0.22
CACNA1A-259ENST00000638114 DNMT3AQ9Y6K1 912 aaPredicted RBP16.45■□□□□ 0.22
CACNA1A-259ENST00000638114 B4E171 279 aa16.44■□□□□ 0.22
CACNA1A-259ENST00000638114 CCL22O00626 93 aa16.44■□□□□ 0.22
CACNA1A-259ENST00000638114 ATXN7O15265 892 aaPredicted RBP16.44■□□□□ 0.22
CACNA1A-259ENST00000638114 PSMD3O43242 534 aa16.44■□□□□ 0.22
CACNA1A-259ENST00000638114 LDB2O43679 373 aa16.44■□□□□ 0.22
CACNA1A-259ENST00000638114 LIASO43766 372 aa16.44■□□□□ 0.22
CACNA1A-259ENST00000638114 UBXN7O94888 489 aa16.44■□□□□ 0.22
CACNA1A-259ENST00000638114 CCDC175P0C221 793 aa16.44■□□□□ 0.22
CACNA1A-259ENST00000638114 AMD1P17707 334 aa16.44■□□□□ 0.22
CACNA1A-259ENST00000638114 TPH1P17752 444 aa16.44■□□□□ 0.22
CACNA1A-259ENST00000638114 ITGALP20701 1170 aa16.44■□□□□ 0.22
CACNA1A-259ENST00000638114 TSPAN7P41732 249 aa16.44■□□□□ 0.22
CACNA1A-259ENST00000638114 DMPKQ09013 629 aa16.44■□□□□ 0.22
CACNA1A-259ENST00000638114 NFE2L1Q14494 772 aa16.44■□□□□ 0.22
CACNA1A-259ENST00000638114 POU6F1Q14863 301 aa16.44■□□□□ 0.22
CACNA1A-259ENST00000638114 RPS6KA1Q15418 735 aa16.44■□□□□ 0.22
CACNA1A-259ENST00000638114 FAM83HQ6ZRV2 1179 aaPredicted RBP16.44■□□□□ 0.22
CACNA1A-259ENST00000638114 ARHGAP22Q7Z5H3 698 aa16.44■□□□□ 0.22
CACNA1A-259ENST00000638114 SLC13A5Q86YT5 568 aaPredicted RBP16.44■□□□□ 0.22
CACNA1A-259ENST00000638114 UBE2Q2Q8WVN8 375 aa16.44■□□□□ 0.22
CACNA1A-259ENST00000638114 ULK4Q96C45 1275 aa16.44■□□□□ 0.22
CACNA1A-259ENST00000638114 DCUN1D1Q96GG9 259 aa16.44■□□□□ 0.22
CACNA1A-259ENST00000638114 DNAJC1Q96KC8 554 aaKnown RBP16.44■□□□□ 0.22
CACNA1A-259ENST00000638114 ALS2CR12Q96Q35 445 aa16.44■□□□□ 0.22
CACNA1A-259ENST00000638114 FRMD8P1Q9BZ68 369 aaPredicted RBP16.44■□□□□ 0.22
CACNA1A-259ENST00000638114 FAM96AQ9H5X1 160 aa16.44■□□□□ 0.22
CACNA1A-259ENST00000638114 SLC40A1Q9NP59 571 aa16.44■□□□□ 0.22
CACNA1A-259ENST00000638114 LZTFL1Q9NQ48 299 aa16.44■□□□□ 0.22
CACNA1A-259ENST00000638114 PIH1D1Q9NWS0 290 aaKnown RBP16.44■□□□□ 0.22
CACNA1A-259ENST00000638114 OGFRQ9NZT2 677 aa16.44■□□□□ 0.22
CACNA1A-259ENST00000638114 FAM8A1Q9UBU6 413 aa16.44■□□□□ 0.22
CACNA1A-259ENST00000638114 PCDHGA3Q9Y5H0 932 aa16.44■□□□□ 0.22
CACNA1A-259ENST00000638114 B3GALT1Q9Y5Z6 326 aa16.44■□□□□ 0.22
CACNA1A-259ENST00000638114 SLC30A1Q9Y6M5 507 aa16.44■□□□□ 0.22
CACNA1A-259ENST00000638114 ATRXP46100 2492 aa16.44■□□□□ 0.22
CACNA1A-259ENST00000638114 MN1Q10571 1320 aaPredicted RBP16.44■□□□□ 0.22
CACNA1A-259ENST00000638114 STMND1H3BQB6 276 aa16.43■□□□□ 0.22
CACNA1A-259ENST00000638114 AP2A1O95782 977 aa16.43■□□□□ 0.22
CACNA1A-259ENST00000638114 IFNB1P01574 187 aa16.43■□□□□ 0.22
CACNA1A-259ENST00000638114 RALBP11234 206 aa16.43■□□□□ 0.22
CACNA1A-259ENST00000638114 STIP1P31948 543 aaKnown RBP16.43■□□□□ 0.22
CACNA1A-259ENST00000638114 MC4RP32245 332 aa16.43■□□□□ 0.22
CACNA1A-259ENST00000638114 GFERP55789 205 aa16.43■□□□□ 0.22
CACNA1A-259ENST00000638114 RAB15P59190 212 aa16.43■□□□□ 0.22
CACNA1A-259ENST00000638114 RHDQ02161 417 aa16.43■□□□□ 0.22
CACNA1A-259ENST00000638114 SRSF6Q13247 344 aaKnown RBP16.43■□□□□ 0.22
CACNA1A-259ENST00000638114 GPR18Q14330 331 aa16.43■□□□□ 0.22
CACNA1A-259ENST00000638114 MANEAQ5SRI9 462 aa16.43■□□□□ 0.22
CACNA1A-259ENST00000638114 DCAF12Q5T6F0 453 aa16.43■□□□□ 0.22
CACNA1A-259ENST00000638114 MEI1Q5TIA1 1274 aa16.43■□□□□ 0.22
CACNA1A-259ENST00000638114 ANKS6Q68DC2 871 aa16.43■□□□□ 0.22
CACNA1A-259ENST00000638114 SNX20Q7Z614 316 aa16.43■□□□□ 0.22
CACNA1A-259ENST00000638114 VASH2Q86V25 355 aa16.43■□□□□ 0.22
CACNA1A-259ENST00000638114 RBM12BQ8IXT5 1001 aaKnown RBP16.43■□□□□ 0.22
CACNA1A-259ENST00000638114 NXPE1Q8N323 547 aa16.43■□□□□ 0.22
CACNA1A-259ENST00000638114 C1orf54Q8WWF1 131 aa16.43■□□□□ 0.22
CACNA1A-259ENST00000638114 JPH3Q8WXH2 748 aaPredicted RBP16.43■□□□□ 0.22
CACNA1A-259ENST00000638114 RTP4Q96DX8 246 aa16.43■□□□□ 0.22
CACNA1A-259ENST00000638114 TGM7Q96PF1 710 aa16.43■□□□□ 0.22
CACNA1A-259ENST00000638114 C19orf43Q9BQ61 176 aa16.43■□□□□ 0.22
CACNA1A-259ENST00000638114 DDA1Q9BW61 102 aa16.43■□□□□ 0.22
CACNA1A-259ENST00000638114 ZNF148Q9UQR1 794 aa16.43■□□□□ 0.22
CACNA1A-259ENST00000638114 SDK2Q58EX2 2172 aa16.43■□□□□ 0.22
CACNA1A-259ENST00000638114 SMG1Q96Q15 3661 aaKnown RBP16.42■□□□□ 0.22
CACNA1A-259ENST00000638114 MGAT4DA6NG13 374 aa16.42■□□□□ 0.22
CACNA1A-259ENST00000638114 IQCJ-SCHIP1C9J366 451 aaPredicted RBP16.42■□□□□ 0.22
CACNA1A-259ENST00000638114 CFAP99D6REC4 459 aa16.42■□□□□ 0.22
CACNA1A-259ENST00000638114 ARSDP51689 593 aa16.42■□□□□ 0.22
CACNA1A-259ENST00000638114 SNX1Q13596 522 aa16.42■□□□□ 0.22
CACNA1A-259ENST00000638114 OASLQ15646 514 aaKnown RBP16.42■□□□□ 0.22
CACNA1A-259ENST00000638114 RPE65Q16518 533 aa16.42■□□□□ 0.22
CACNA1A-259ENST00000638114 TAF1BQ53T94 588 aaPredicted RBP16.42■□□□□ 0.22
CACNA1A-259ENST00000638114 ZRANB3Q5FWF4 1079 aa16.42■□□□□ 0.22
CACNA1A-259ENST00000638114 DTX1Q86Y01 620 aa16.42■□□□□ 0.22
CACNA1A-259ENST00000638114 LRRC8AQ8IWT6 810 aa16.42■□□□□ 0.22
CACNA1A-259ENST00000638114 BMPERQ8N8U9 685 aa16.42■□□□□ 0.22
CACNA1A-259ENST00000638114 GPR150Q8NGU9 434 aa16.42■□□□□ 0.22
CACNA1A-259ENST00000638114 SNRNP27Q8WVK2 155 aaKnown RBP16.42■□□□□ 0.22
CACNA1A-259ENST00000638114 SLC39A7Q92504 469 aa16.42■□□□□ 0.22
CACNA1A-259ENST00000638114 RSC1A1Q92681 617 aa16.42■□□□□ 0.22
CACNA1A-259ENST00000638114 COPS8Q99627 209 aa16.42■□□□□ 0.22
CACNA1A-259ENST00000638114 ASPSCR1Q9BZE9 553 aa16.42■□□□□ 0.22
CACNA1A-259ENST00000638114 IMP3Q9NV31 184 aaKnown RBP16.42■□□□□ 0.22
CACNA1A-259ENST00000638114 CCDC78A2IDD5 438 aa16.41■□□□□ 0.22
CACNA1A-259ENST00000638114 AGAP14A8MT82 685 aa16.41■□□□□ 0.22
CACNA1A-259ENST00000638114 ERVH48-1M5A8F1 160 aa16.41■□□□□ 0.22
CACNA1A-259ENST00000638114 CAPN5O15484 640 aaPredicted RBP16.41■□□□□ 0.22
CACNA1A-259ENST00000638114 EFSO43281 561 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms