RNA–Protein interactions for RNA: ENST00000638016.1

PNKP-230, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 109 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-230ENST00000638016 WDR74Q6RFH5 385 aaPredicted RBP17.4■□□□□ 0.38
PNKP-230ENST00000638016 CCDC81Q6ZN84 652 aa17.4■□□□□ 0.38
PNKP-230ENST00000638016 ARHGAP22Q7Z5H3 698 aa17.4■□□□□ 0.38
PNKP-230ENST00000638016 DTX1Q86Y01 620 aa17.4■□□□□ 0.38
PNKP-230ENST00000638016 LILRA3Q8N6C8 439 aaPredicted RBP17.4■□□□□ 0.38
PNKP-230ENST00000638016 BMPERQ8N8U9 685 aa17.4■□□□□ 0.38
PNKP-230ENST00000638016 TTC13Q8NBP0 860 aa17.4■□□□□ 0.38
PNKP-230ENST00000638016 DTX3LQ8TDB6 740 aa17.4■□□□□ 0.38
PNKP-230ENST00000638016 BRSK1Q8TDC3 778 aa17.4■□□□□ 0.38
PNKP-230ENST00000638016 SLC39A7Q92504 469 aa17.4■□□□□ 0.38
PNKP-230ENST00000638016 SH3KBP1Q96B97 665 aa17.4■□□□□ 0.38
PNKP-230ENST00000638016 DNAJC1Q96KC8 554 aaKnown RBP17.4■□□□□ 0.38
PNKP-230ENST00000638016 CCNL2Q96S94 520 aaPredicted RBP17.4■□□□□ 0.38
PNKP-230ENST00000638016 APMAPQ9HDC9 416 aa17.4■□□□□ 0.38
PNKP-230ENST00000638016 SLC39A1Q9NY26 324 aa17.4■□□□□ 0.38
PNKP-230ENST00000638016 CFAP20Q9Y6A4 193 aaKnown RBP17.4■□□□□ 0.38
PNKP-230ENST00000638016 PPP1CAP62136 330 aa17.39■□□□□ 0.37
PNKP-230ENST00000638016 PARP6Q2NL67 630 aa17.39■□□□□ 0.37
PNKP-230ENST00000638016 AMZ2Q86W34 360 aa17.39■□□□□ 0.37
PNKP-230ENST00000638016 C1orf54Q8WWF1 131 aa17.39■□□□□ 0.37
PNKP-230ENST00000638016 TGM7Q96PF1 710 aa17.39■□□□□ 0.37
PNKP-230ENST00000638016 TAAR9Q96RI9 348 aa17.39■□□□□ 0.37
PNKP-230ENST00000638016 LDHAL6BQ9BYZ2 381 aaPredicted RBP17.39■□□□□ 0.37
PNKP-230ENST00000638016 ZCCHC2Q9C0B9 1178 aaKnown RBP17.39■□□□□ 0.37
PNKP-230ENST00000638016 SEMA4CQ9C0C4 833 aa17.39■□□□□ 0.37
PNKP-230ENST00000638016 SLC40A1Q9NP59 571 aa17.39■□□□□ 0.37
PNKP-230ENST00000638016 MN1Q10571 1320 aaPredicted RBP17.39■□□□□ 0.37
PNKP-230ENST00000638016 KIF1CO43896 1103 aaKnown RBP17.38■□□□□ 0.37
PNKP-230ENST00000638016 PPFIA2O75334 1257 aa17.38■□□□□ 0.37
PNKP-230ENST00000638016 UBXN7O94888 489 aa17.38■□□□□ 0.37
PNKP-230ENST00000638016 ETS1P14921 441 aa17.38■□□□□ 0.37
PNKP-230ENST00000638016 MSH3P20585 1137 aa17.38■□□□□ 0.37
PNKP-230ENST00000638016 DMPKQ09013 629 aa17.38■□□□□ 0.37
PNKP-230ENST00000638016 SNX1Q13596 522 aa17.38■□□□□ 0.37
PNKP-230ENST00000638016 SEPT6Q14141 434 aa17.38■□□□□ 0.37
PNKP-230ENST00000638016 POU6F1Q14863 301 aa17.38■□□□□ 0.37
PNKP-230ENST00000638016 AGAP9Q5VTM2 703 aa17.38■□□□□ 0.37
PNKP-230ENST00000638016 WASH2PQ6VEQ5 465 aa17.38■□□□□ 0.37
PNKP-230ENST00000638016 TXLNBQ8N3L3 684 aa17.38■□□□□ 0.37
PNKP-230ENST00000638016 RNF10Q8N5U6 811 aaKnown RBP17.38■□□□□ 0.37
PNKP-230ENST00000638016 GLIS1Q8NBF1 620 aa17.38■□□□□ 0.37
PNKP-230ENST00000638016 SPDYE1Q8NFV5 336 aaPredicted RBP17.38■□□□□ 0.37
PNKP-230ENST00000638016 SNRNP27Q8WVK2 155 aaKnown RBP17.38■□□□□ 0.37
PNKP-230ENST00000638016 TTC9Q92623 222 aa17.38■□□□□ 0.37
PNKP-230ENST00000638016 CXorf40BQ96DE9 158 aa17.38■□□□□ 0.37
PNKP-230ENST00000638016 DPYSL5Q9BPU6 564 aa17.38■□□□□ 0.37
PNKP-230ENST00000638016 ARNT2Q9HBZ2 717 aa17.38■□□□□ 0.37
PNKP-230ENST00000638016 LZTFL1Q9NQ48 299 aa17.38■□□□□ 0.37
PNKP-230ENST00000638016 WASH6PQ9NQA3 447 aa17.38■□□□□ 0.37
PNKP-230ENST00000638016 POT1Q9NUX5 634 aa17.38■□□□□ 0.37
PNKP-230ENST00000638016 CRLS1Q9UJA2 301 aa17.38■□□□□ 0.37
PNKP-230ENST00000638016 PIKFYVEQ9Y2I7 2098 aa17.38■□□□□ 0.37
PNKP-230ENST00000638016 GOLGA6L6A8MZA4 724 aa17.37■□□□□ 0.37
PNKP-230ENST00000638016 LIASO43766 372 aa17.37■□□□□ 0.37
PNKP-230ENST00000638016 CRTAMO95727 393 aa17.37■□□□□ 0.37
PNKP-230ENST00000638016 MC4RP32245 332 aa17.37■□□□□ 0.37
PNKP-230ENST00000638016 SEPHS1P49903 392 aa17.37■□□□□ 0.37
PNKP-230ENST00000638016 GSDMDP57764 484 aa17.37■□□□□ 0.37
PNKP-230ENST00000638016 CYP4F2P78329 520 aa17.37■□□□□ 0.37
PNKP-230ENST00000638016 LY6DQ14210 128 aa17.37■□□□□ 0.37
PNKP-230ENST00000638016 OASLQ15646 514 aaKnown RBP17.37■□□□□ 0.37
PNKP-230ENST00000638016 RPE65Q16518 533 aa17.37■□□□□ 0.37
PNKP-230ENST00000638016 MANEAQ5SRI9 462 aa17.37■□□□□ 0.37
PNKP-230ENST00000638016 SEL1L2Q5TEA6 688 aa17.37■□□□□ 0.37
PNKP-230ENST00000638016 TMEM164Q5U3C3 297 aa17.37■□□□□ 0.37
PNKP-230ENST00000638016 SLC13A5Q86YT5 568 aaPredicted RBP17.37■□□□□ 0.37
PNKP-230ENST00000638016 WWP1Q9H0M0 922 aa17.37■□□□□ 0.37
PNKP-230ENST00000638016 UCK1Q9HA47 277 aa17.37■□□□□ 0.37
PNKP-230ENST00000638016 IMP3Q9NV31 184 aaKnown RBP17.37■□□□□ 0.37
PNKP-230ENST00000638016 PCDHGA3Q9Y5H0 932 aa17.37■□□□□ 0.37
PNKP-230ENST00000638016 BAHCC1Q9P281 2608 aa17.36■□□□□ 0.37
PNKP-230ENST00000638016 EIF4E1BA6NMX2 242 aaKnown RBP17.36■□□□□ 0.37
PNKP-230ENST00000638016 AGAP14A8MT82 685 aa17.36■□□□□ 0.37
PNKP-230ENST00000638016 B4E171 279 aa17.36■□□□□ 0.37
PNKP-230ENST00000638016 CAPN5O15484 640 aaPredicted RBP17.36■□□□□ 0.37
PNKP-230ENST00000638016 AP2A1O95782 977 aa17.36■□□□□ 0.37
PNKP-230ENST00000638016 C9P02748 559 aa17.36■□□□□ 0.37
PNKP-230ENST00000638016 AMD1P17707 334 aa17.36■□□□□ 0.37
PNKP-230ENST00000638016 VCLP18206 1134 aa17.36■□□□□ 0.37
PNKP-230ENST00000638016 TSPAN7P41732 249 aa17.36■□□□□ 0.37
PNKP-230ENST00000638016 GRIA1P42261 906 aa17.36■□□□□ 0.37
PNKP-230ENST00000638016 SH3BP2P78314 561 aa17.36■□□□□ 0.37
PNKP-230ENST00000638016 LONRF2Q1L5Z9 754 aa17.36■□□□□ 0.37
PNKP-230ENST00000638016 CCDC38Q502W7 563 aa17.36■□□□□ 0.37
PNKP-230ENST00000638016 TAF1BQ53T94 588 aaPredicted RBP17.36■□□□□ 0.37
PNKP-230ENST00000638016 MEI1Q5TIA1 1274 aa17.36■□□□□ 0.37
PNKP-230ENST00000638016 NXPE1Q8N323 547 aa17.36■□□□□ 0.37
PNKP-230ENST00000638016 OR52K1Q8NGK4 314 aa17.36■□□□□ 0.37
PNKP-230ENST00000638016 RTP4Q96DX8 246 aa17.36■□□□□ 0.37
PNKP-230ENST00000638016 C9orf72Q96LT7 481 aa17.36■□□□□ 0.37
PNKP-230ENST00000638016 INSM2Q96T92 566 aaPredicted RBP17.36■□□□□ 0.37
PNKP-230ENST00000638016 NRTNQ99748 197 aa17.36■□□□□ 0.37
PNKP-230ENST00000638016 DDA1Q9BW61 102 aa17.36■□□□□ 0.37
PNKP-230ENST00000638016 TSGA10Q9BZW7 698 aa17.36■□□□□ 0.37
PNKP-230ENST00000638016 LRRC40Q9H9A6 602 aa17.36■□□□□ 0.37
PNKP-230ENST00000638016 SIDT1Q9NXL6 827 aaKnown RBP17.36■□□□□ 0.37
PNKP-230ENST00000638016 KALRNO60229 2985 aa17.35■□□□□ 0.37
PNKP-230ENST00000638016 OR51F1A6NGY5 319 aa17.35■□□□□ 0.37
PNKP-230ENST00000638016 IQCJ-SCHIP1C9J366 451 aaPredicted RBP17.35■□□□□ 0.37
PNKP-230ENST00000638016 STMND1H3BQB6 276 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms