RNA–Protein interactions for RNA: ENST00000635853.1

SPTAN1-228, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 5

Gene SPTAN1, Length 5,870 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-228ENST00000635853 NR2C2P49116 596 aa9.76□□□□□ -0.85
SPTAN1-228ENST00000635853 PTGES3Q15185 160 aaKnown RBP9.76□□□□□ -0.85
SPTAN1-228ENST00000635853 AFTPHQ6ULP2 937 aa9.76□□□□□ -0.85
SPTAN1-228ENST00000635853 GPC2Q8N158 579 aa9.76□□□□□ -0.85
SPTAN1-228ENST00000635853 ANKRD52Q8NB46 1076 aa9.76□□□□□ -0.85
SPTAN1-228ENST00000635853 SMG8Q8ND04 991 aaKnown RBP9.76□□□□□ -0.85
SPTAN1-228ENST00000635853 TMIGD2Q96BF3 282 aa9.76□□□□□ -0.85
SPTAN1-228ENST00000635853 TESCQ96BS2 214 aa9.76□□□□□ -0.85
SPTAN1-228ENST00000635853 ALPK1Q96QP1 1244 aa9.76□□□□□ -0.85
SPTAN1-228ENST00000635853 HSD17B12Q53GQ0 312 aa9.76□□□□□ -0.85
SPTAN1-228ENST00000635853 PGBD2Q6P3X8 592 aa9.76□□□□□ -0.85
SPTAN1-228ENST00000635853 CES3Q6UWW8 571 aa9.76□□□□□ -0.85
SPTAN1-228ENST00000635853 METTL3Q86U44 580 aaKnown RBP9.76□□□□□ -0.85
SPTAN1-228ENST00000635853 SCML4Q8N228 414 aa9.76□□□□□ -0.85
SPTAN1-228ENST00000635853 DENND1AQ8TEH3 1009 aa9.76□□□□□ -0.85
SPTAN1-228ENST00000635853 ERMAPQ96PL5 475 aaPredicted RBP9.76□□□□□ -0.85
SPTAN1-228ENST00000635853 NPLQ9BXD5 320 aaPredicted RBP9.76□□□□□ -0.85
SPTAN1-228ENST00000635853 EGFL7Q9UHF1 273 aa9.76□□□□□ -0.85
SPTAN1-228ENST00000635853 MRPS17Q9Y2R5 130 aaKnown RBP9.76□□□□□ -0.85
SPTAN1-228ENST00000635853 H3BM21 787 aa9.76□□□□□ -0.85
SPTAN1-228ENST00000635853 EML1O00423 815 aa9.76□□□□□ -0.85
SPTAN1-228ENST00000635853 CHP2O43745 196 aa9.76□□□□□ -0.85
SPTAN1-228ENST00000635853 PLOD3O60568 738 aa9.76□□□□□ -0.85
SPTAN1-228ENST00000635853 FAM155BO75949 473 aa9.76□□□□□ -0.85
SPTAN1-228ENST00000635853 ANGPTL1O95841 491 aa9.76□□□□□ -0.85
SPTAN1-228ENST00000635853 PCCBP05166 539 aa9.76□□□□□ -0.85
SPTAN1-228ENST00000635853 ELFN1P0C7U0 828 aa9.76□□□□□ -0.85
SPTAN1-228ENST00000635853 C7P10643 843 aa9.76□□□□□ -0.85
SPTAN1-228ENST00000635853 MTHFRP42898 656 aa9.76□□□□□ -0.85
SPTAN1-228ENST00000635853 UGT2B15P54855 530 aa9.76□□□□□ -0.85
SPTAN1-228ENST00000635853 TAS2R41P59536 307 aa9.76□□□□□ -0.85
SPTAN1-228ENST00000635853 VBP1P61758 197 aa9.76□□□□□ -0.85
SPTAN1-228ENST00000635853 GCNT1Q02742 428 aa9.76□□□□□ -0.85
SPTAN1-228ENST00000635853 E2F2Q14209 437 aa9.76□□□□□ -0.85
SPTAN1-228ENST00000635853 LSM12Q3MHD2 195 aaKnown RBP9.76□□□□□ -0.85
SPTAN1-228ENST00000635853 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP9.76□□□□□ -0.85
SPTAN1-228ENST00000635853 C4orf19Q8IY42 314 aa9.76□□□□□ -0.85
SPTAN1-228ENST00000635853 SIMC1Q8NDZ2 872 aa9.76□□□□□ -0.85
SPTAN1-228ENST00000635853 OR4A15Q8NGL6 344 aa9.76□□□□□ -0.85
SPTAN1-228ENST00000635853 TEX47Q8TBZ9 253 aa9.76□□□□□ -0.85
SPTAN1-228ENST00000635853 AZIN2Q96A70 460 aa9.76□□□□□ -0.85
SPTAN1-228ENST00000635853 WDR55Q9H6Y2 383 aaPredicted RBP9.76□□□□□ -0.85
SPTAN1-228ENST00000635853 LEF1Q9UJU2 399 aaPredicted RBP9.76□□□□□ -0.85
SPTAN1-228ENST00000635853 NUP50Q9UKX7 468 aa9.76□□□□□ -0.85
SPTAN1-228ENST00000635853 AQP12BA6NM10 295 aa9.76□□□□□ -0.85
SPTAN1-228ENST00000635853 CCL16O15467 120 aa9.76□□□□□ -0.85
SPTAN1-228ENST00000635853 SERPINA1P01009 418 aa9.76□□□□□ -0.85
SPTAN1-228ENST00000635853 TGFB3P10600 412 aa9.76□□□□□ -0.85
SPTAN1-228ENST00000635853 KDELR1P24390 212 aa9.76□□□□□ -0.85
SPTAN1-228ENST00000635853 HOXD13P35453 343 aa9.76□□□□□ -0.85
SPTAN1-228ENST00000635853 DGKZQ13574 1117 aa9.76□□□□□ -0.85
SPTAN1-228ENST00000635853 UBE2UQ5VVX9 321 aa9.76□□□□□ -0.85
SPTAN1-228ENST00000635853 CXXC5Q7LFL8 322 aaKnown RBP9.76□□□□□ -0.85
SPTAN1-228ENST00000635853 P4HA3Q7Z4N8 544 aa9.76□□□□□ -0.85
SPTAN1-228ENST00000635853 SCUBE3Q8IX30 993 aa9.76□□□□□ -0.85
SPTAN1-228ENST00000635853 AQP12AQ8IXF9 295 aa9.76□□□□□ -0.85
SPTAN1-228ENST00000635853 LSM14AQ8ND56 463 aaKnown RBP9.76□□□□□ -0.85
SPTAN1-228ENST00000635853 VANGL1Q8TAA9 524 aaPredicted RBP9.76□□□□□ -0.85
SPTAN1-228ENST00000635853 EBNA1BP2Q99848 306 aaKnown RBP9.76□□□□□ -0.85
SPTAN1-228ENST00000635853 TMPRSS4Q9NRS4 437 aa9.76□□□□□ -0.85
SPTAN1-228ENST00000635853 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP9.76□□□□□ -0.85
SPTAN1-228ENST00000635853 ATRNO75882 1429 aa9.75□□□□□ -0.85
SPTAN1-228ENST00000635853 FAM240BA0A1B0GVZ2 78 aa9.75□□□□□ -0.85
SPTAN1-228ENST00000635853 SLC28A2O43868 658 aa9.75□□□□□ -0.85
SPTAN1-228ENST00000635853 TULP3O75386 442 aa9.75□□□□□ -0.85
SPTAN1-228ENST00000635853 OR5F1O95221 314 aa9.75□□□□□ -0.85
SPTAN1-228ENST00000635853 VIPP01282 170 aa9.75□□□□□ -0.85
SPTAN1-228ENST00000635853 C8BP07358 591 aa9.75□□□□□ -0.85
SPTAN1-228ENST00000635853 MPSTP25325 297 aa9.75□□□□□ -0.85
SPTAN1-228ENST00000635853 NOS2P35228 1153 aa9.75□□□□□ -0.85
SPTAN1-228ENST00000635853 ARL3P36405 182 aa9.75□□□□□ -0.85
SPTAN1-228ENST00000635853 SLC15A1P46059 708 aa9.75□□□□□ -0.85
SPTAN1-228ENST00000635853 ZNF155Q12901 538 aaPredicted RBP9.75□□□□□ -0.85
SPTAN1-228ENST00000635853 EFR3AQ14156 821 aa9.75□□□□□ -0.85
SPTAN1-228ENST00000635853 DRICH1Q6PGQ1 229 aaPredicted RBP9.75□□□□□ -0.85
SPTAN1-228ENST00000635853 FATE1Q969F0 183 aa9.75□□□□□ -0.85
SPTAN1-228ENST00000635853 PHOX2BQ99453 314 aa9.75□□□□□ -0.85
SPTAN1-228ENST00000635853 RNF121Q9H920 327 aa9.75□□□□□ -0.85
SPTAN1-228ENST00000635853 MGAT4AQ9UM21 535 aa9.75□□□□□ -0.85
SPTAN1-228ENST00000635853 MRPS7Q9Y2R9 242 aaKnown RBP9.75□□□□□ -0.85
SPTAN1-228ENST00000635853 MYH8P13535 1937 aa9.75□□□□□ -0.85
SPTAN1-228ENST00000635853 RECQL5O94762 991 aaPredicted RBP9.75□□□□□ -0.85
SPTAN1-228ENST00000635853 ARF4P18085 180 aaPredicted RBP9.75□□□□□ -0.85
SPTAN1-228ENST00000635853 SREBF1P36956 1147 aa9.75□□□□□ -0.85
SPTAN1-228ENST00000635853 YAP1P46937 504 aaKnown RBP9.75□□□□□ -0.85
SPTAN1-228ENST00000635853 NDST2P52849 883 aa9.75□□□□□ -0.85
SPTAN1-228ENST00000635853 RPP38P78345 283 aaKnown RBP9.75□□□□□ -0.85
SPTAN1-228ENST00000635853 SLC6A3Q01959 620 aa9.75□□□□□ -0.85
SPTAN1-228ENST00000635853 FOXM1Q08050 763 aa9.75□□□□□ -0.85
SPTAN1-228ENST00000635853 MAB21L1Q13394 359 aa9.75□□□□□ -0.85
SPTAN1-228ENST00000635853 STXBP5Q5T5C0 1151 aa9.75□□□□□ -0.85
SPTAN1-228ENST00000635853 ERMP1Q7Z2K6 904 aa9.75□□□□□ -0.85
SPTAN1-228ENST00000635853 FBXO30Q8TB52 745 aa9.75□□□□□ -0.85
SPTAN1-228ENST00000635853 GAD1Q99259 594 aa9.75□□□□□ -0.85
SPTAN1-228ENST00000635853 P2RX7Q99572 595 aaKnown RBP9.75□□□□□ -0.85
SPTAN1-228ENST00000635853 TM6SF2Q9BZW4 377 aa9.75□□□□□ -0.85
SPTAN1-228ENST00000635853 MMP27Q9H306 513 aa9.75□□□□□ -0.85
SPTAN1-228ENST00000635853 PCDHB11Q9Y5F2 797 aa9.75□□□□□ -0.85
SPTAN1-228ENST00000635853 TLL2Q9Y6L7 1015 aa9.75□□□□□ -0.85
SPTAN1-228ENST00000635853 XKRYO14609 159 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms